RNA–Protein interactions for RNA: ENST00000557498.1

ARHGEF40-208, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 2

Gene ARHGEF40, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-208ENST00000557498 CHD1O14646 1710 aa23.02■■□□□ 1.28
ARHGEF40-208ENST00000557498 RANGAP1P46060 587 aaPredicted RBP23.01■■□□□ 1.27
ARHGEF40-208ENST00000557498 IQGAP2Q13576 1575 aa23.01■■□□□ 1.27
ARHGEF40-208ENST00000557498 CEP170Q5SW79 1584 aa23.01■■□□□ 1.27
ARHGEF40-208ENST00000557498 ARHGAP35Q9NRY4 1499 aa23■■□□□ 1.27
ARHGEF40-208ENST00000557498 NUP160Q12769 1436 aa22.99■■□□□ 1.27
ARHGEF40-208ENST00000557498 EFCAB5A4FU69 1503 aa22.98■■□□□ 1.27
ARHGEF40-208ENST00000557498 ARAP1Q96P48 1450 aa22.98■■□□□ 1.27
ARHGEF40-208ENST00000557498 KIAA0586Q9BVV6 1533 aa22.98■■□□□ 1.27
ARHGEF40-208ENST00000557498 FBLN2P98095 1184 aa22.97■■□□□ 1.27
ARHGEF40-208ENST00000557498 SAMD9Q5K651 1589 aa22.93■■□□□ 1.26
ARHGEF40-208ENST00000557498 VPS8Q8N3P4 1428 aa22.91■■□□□ 1.26
ARHGEF40-208ENST00000557498 UGGT2Q9NYU1 1516 aa22.91■■□□□ 1.26
ARHGEF40-208ENST00000557498 FHOD3Q2V2M9 1422 aa22.82■■□□□ 1.24
ARHGEF40-208ENST00000557498 KIAA0556O60303 1618 aa22.79■■□□□ 1.24
ARHGEF40-208ENST00000557498 P3H3Q8IVL6 736 aa22.77■■□□□ 1.24
ARHGEF40-208ENST00000557498 CLASP1Q7Z460 1538 aa22.77■■□□□ 1.24
ARHGEF40-208ENST00000557498 DISP1Q96F81 1524 aa22.77■■□□□ 1.24
ARHGEF40-208ENST00000557498 SHROOM2Q13796 1616 aa22.74■■□□□ 1.23
ARHGEF40-208ENST00000557498 FMN1Q68DA7 1419 aa22.73■■□□□ 1.23
ARHGEF40-208ENST00000557498 PCF11O94913 1555 aaKnown RBP22.72■■□□□ 1.23
ARHGEF40-208ENST00000557498 JPH4Q96JJ6 628 aa22.72■■□□□ 1.23
ARHGEF40-208ENST00000557498 CARMIL2Q6F5E8 1435 aa22.69■■□□□ 1.22
ARHGEF40-208ENST00000557498 FYCO1Q9BQS8 1478 aa22.66■■□□□ 1.22
ARHGEF40-208ENST00000557498 CASKIN1Q8WXD9 1431 aa22.65■■□□□ 1.22
ARHGEF40-208ENST00000557498 PRG4Q92954 1404 aaPredicted RBP22.64■■□□□ 1.21
ARHGEF40-208ENST00000557498 APLP2Q06481 763 aa22.61■■□□□ 1.21
ARHGEF40-208ENST00000557498 MAP3K1Q13233 1512 aa22.59■■□□□ 1.21
ARHGEF40-208ENST00000557498 CFAP43Q8NDM7 1665 aa22.58■■□□□ 1.21
ARHGEF40-208ENST00000557498 HECW1Q76N89 1606 aa22.57■■□□□ 1.2
ARHGEF40-208ENST00000557498 TIAM1Q13009 1591 aa22.57■■□□□ 1.2
ARHGEF40-208ENST00000557498 OSCARQ8IYS5 282 aa22.55■■□□□ 1.2
ARHGEF40-208ENST00000557498 PPARGC1BQ86YN6 1023 aaKnown RBP22.54■■□□□ 1.2
ARHGEF40-208ENST00000557498 ERCC6L2Q5T890 1561 aa22.54■■□□□ 1.2
ARHGEF40-208ENST00000557498 RAPGEF6Q8TEU7 1601 aa22.53■■□□□ 1.2
ARHGEF40-208ENST00000557498 LRRIQ1Q96JM4 1722 aa22.53■■□□□ 1.2
ARHGEF40-208ENST00000557498 ATP1B4Q9UN42 357 aaPredicted RBP22.49■■□□□ 1.19
ARHGEF40-208ENST00000557498 CCDC18Q5T9S5 1454 aa22.47■■□□□ 1.19
ARHGEF40-208ENST00000557498 ABCA8O94911 1581 aa22.47■■□□□ 1.19
ARHGEF40-208ENST00000557498 TTBK1Q5TCY1 1321 aaPredicted RBP22.47■■□□□ 1.19
ARHGEF40-208ENST00000557498 PTPRGP23470 1445 aa22.47■■□□□ 1.19
ARHGEF40-208ENST00000557498 PLB1Q6P1J6 1458 aa22.46■■□□□ 1.19
ARHGEF40-208ENST00000557498 EPRSP07814 1512 aaKnown RBP22.44■■□□□ 1.18
ARHGEF40-208ENST00000557498 NUP153P49790 1475 aaKnown RBP22.44■■□□□ 1.18
ARHGEF40-208ENST00000557498 LRRC9Q6ZRR7 1453 aa22.44■■□□□ 1.18
ARHGEF40-208ENST00000557498 KANK4Q5T7N3 995 aaPredicted RBP22.43■■□□□ 1.18
ARHGEF40-208ENST00000557498 TRIM26Q12899 539 aaPredicted RBP22.4■■□□□ 1.18
ARHGEF40-208ENST00000557498 CDK13Q14004 1512 aaKnown RBP22.39■■□□□ 1.17
ARHGEF40-208ENST00000557498 UACAQ9BZF9 1416 aa22.36■■□□□ 1.17
ARHGEF40-208ENST00000557498 EHBP1L1Q8N3D4 1523 aa22.36■■□□□ 1.17
ARHGEF40-208ENST00000557498 ABCC2Q92887 1545 aa22.33■■□□□ 1.17
ARHGEF40-208ENST00000557498 MAGI3Q5TCQ9 1506 aa22.32■■□□□ 1.16
ARHGEF40-208ENST00000557498 MTUS2Q5JR59 1369 aa22.31■■□□□ 1.16
ARHGEF40-208ENST00000557498 UHRF1BP1LA0JNW5 1464 aa22.29■■□□□ 1.16
ARHGEF40-208ENST00000557498 ARID3CA6NKF2 412 aa22.28■■□□□ 1.16
ARHGEF40-208ENST00000557498 SUPT6HQ7KZ85 1726 aaKnown RBP22.27■■□□□ 1.16
ARHGEF40-208ENST00000557498 PCGF6Q9BYE7 350 aa22.27■■□□□ 1.16
ARHGEF40-208ENST00000557498 ATP10BO94823 1461 aa22.27■■□□□ 1.16
ARHGEF40-208ENST00000557498 ARHGEF11O15085 1522 aa22.25■■□□□ 1.15
ARHGEF40-208ENST00000557498 CDK11AQ9UQ88 783 aaPredicted RBP22.22■■□□□ 1.15
ARHGEF40-208ENST00000557498 ADCY10Q96PN6 1610 aa22.21■■□□□ 1.15
ARHGEF40-208ENST00000557498 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.21■■□□□ 1.15
ARHGEF40-208ENST00000557498 HNRNPUL2Q1KMD3 747 aaKnown RBP22.21■■□□□ 1.15
ARHGEF40-208ENST00000557498 NCOA2Q15596 1464 aa22.21■■□□□ 1.15
ARHGEF40-208ENST00000557498 PHLDB1Q86UU1 1377 aa22.2■■□□□ 1.14
ARHGEF40-208ENST00000557498 TROQ12816 1431 aaPredicted RBP22.2■■□□□ 1.14
ARHGEF40-208ENST00000557498 RRBP1Q9P2E9 1410 aaKnown RBP22.19■■□□□ 1.14
ARHGEF40-208ENST00000557498 ZCCHC11Q5TAX3 1644 aaKnown RBP22.19■■□□□ 1.14
ARHGEF40-208ENST00000557498 RIMBP3CA6NJZ7 1639 aa22.17■■□□□ 1.14
ARHGEF40-208ENST00000557498 RIMBP3BA6NNM3 1639 aa22.17■■□□□ 1.14
ARHGEF40-208ENST00000557498 RIMBP3Q9UFD9 1639 aa22.17■■□□□ 1.14
ARHGEF40-208ENST00000557498 KDM5BQ9UGL1 1544 aa22.17■■□□□ 1.14
ARHGEF40-208ENST00000557498 KIF14Q15058 1648 aa22.12■■□□□ 1.13
ARHGEF40-208ENST00000557498 PLEKHD1A6NEE1 506 aa22.11■■□□□ 1.13
ARHGEF40-208ENST00000557498 MYOM3Q5VTT5 1437 aa22.11■■□□□ 1.13
ARHGEF40-208ENST00000557498 CCNB3Q8WWL7 1395 aa22.11■■□□□ 1.13
ARHGEF40-208ENST00000557498 FGD6Q6ZV73 1430 aa22.07■■□□□ 1.12
ARHGEF40-208ENST00000557498 ITSN2Q9NZM3 1697 aa22.04■■□□□ 1.12
ARHGEF40-208ENST00000557498 ABCC10Q5T3U5 1492 aa22.03■■□□□ 1.12
ARHGEF40-208ENST00000557498 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.01■■□□□ 1.11
ARHGEF40-208ENST00000557498 MIA2Q96PC5 1412 aa22.01■■□□□ 1.11
ARHGEF40-208ENST00000557498 PTPN23Q9H3S7 1636 aa22.01■■□□□ 1.11
ARHGEF40-208ENST00000557498 TCOF1Q13428 1488 aaKnown RBP21.99■■□□□ 1.11
ARHGEF40-208ENST00000557498 WDR7Q9Y4E6 1490 aa21.98■■□□□ 1.11
ARHGEF40-208ENST00000557498 CDC42BPAQ5VT25 1732 aa21.98■■□□□ 1.11
ARHGEF40-208ENST00000557498 GPATCH8Q9UKJ3 1502 aaKnown RBP21.98■■□□□ 1.11
ARHGEF40-208ENST00000557498 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.96■■□□□ 1.11
ARHGEF40-208ENST00000557498 TTC37Q6PGP7 1564 aa21.95■■□□□ 1.11
ARHGEF40-208ENST00000557498 NPM1P06748 294 aaKnown RBP eCLIP21.95■■□□□ 1.1
ARHGEF40-208ENST00000557498 FAM50AQ14320 339 aaKnown RBP21.95■■□□□ 1.1
ARHGEF40-208ENST00000557498 CYB5RLQ6IPT4 315 aa21.94■■□□□ 1.1
ARHGEF40-208ENST00000557498 ASXL2Q76L83 1435 aa21.94■■□□□ 1.1
ARHGEF40-208ENST00000557498 PREX2Q70Z35 1606 aa21.93■■□□□ 1.1
ARHGEF40-208ENST00000557498 MYO5CQ9NQX4 1742 aa21.91■■□□□ 1.1
ARHGEF40-208ENST00000557498 MAPKBP1O60336 1514 aa21.88■■□□□ 1.09
ARHGEF40-208ENST00000557498 CDC42BPBQ9Y5S2 1711 aa21.88■■□□□ 1.09
ARHGEF40-208ENST00000557498 KCNH8Q96L42 1107 aa21.87■■□□□ 1.09
ARHGEF40-208ENST00000557498 CAMSAP2Q08AD1 1489 aa21.87■■□□□ 1.09
ARHGEF40-208ENST00000557498 CFDP1Q9UEE9 299 aaPredicted RBP21.86■■□□□ 1.09
ARHGEF40-208ENST00000557498 ABCA9Q8IUA7 1624 aa21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 131.6 ms