RNA–Protein interactions for RNA: ENST00000557442.5

HNRNPC-232, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 1,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-232ENST00000557442 PHF23Q9BUL5 403 aaPredicted RBP17.8■□□□□ 0.44
HNRNPC-232ENST00000557442 CTTNBP2Q8WZ74 1663 aa17.8■□□□□ 0.44
HNRNPC-232ENST00000557442 RAPGEF2Q9Y4G8 1499 aa17.77■□□□□ 0.43
HNRNPC-232ENST00000557442 EEA1Q15075 1411 aa17.75■□□□□ 0.43
HNRNPC-232ENST00000557442 ERCC6L2Q5T890 1561 aa17.72■□□□□ 0.43
HNRNPC-232ENST00000557442 IQGAP2Q13576 1575 aa17.71■□□□□ 0.43
HNRNPC-232ENST00000557442 ARAP1Q96P48 1450 aa17.71■□□□□ 0.43
HNRNPC-232ENST00000557442 PRXQ9BXM0 1461 aa17.71■□□□□ 0.43
HNRNPC-232ENST00000557442 KIAA0586Q9BVV6 1533 aa17.71■□□□□ 0.43
HNRNPC-232ENST00000557442 KIF21BO75037 1637 aa17.67■□□□□ 0.42
HNRNPC-232ENST00000557442 FAM9AQ8IZU1 332 aaPredicted RBP17.65■□□□□ 0.42
HNRNPC-232ENST00000557442 CSRNP3Q8WYN3 585 aa17.65■□□□□ 0.42
HNRNPC-232ENST00000557442 PRG4Q92954 1404 aaPredicted RBP17.63■□□□□ 0.41
HNRNPC-232ENST00000557442 JPH4Q96JJ6 628 aa17.61■□□□□ 0.41
HNRNPC-232ENST00000557442 CYB5RLQ6IPT4 315 aa17.59■□□□□ 0.41
HNRNPC-232ENST00000557442 UGGT2Q9NYU1 1516 aa17.57■□□□□ 0.4
HNRNPC-232ENST00000557442 KIAA0556O60303 1618 aa17.55■□□□□ 0.4
HNRNPC-232ENST00000557442 CARMIL2Q6F5E8 1435 aa17.52■□□□□ 0.4
HNRNPC-232ENST00000557442 DISP1Q96F81 1524 aa17.51■□□□□ 0.39
HNRNPC-232ENST00000557442 GOLGA3Q08378 1498 aa17.5■□□□□ 0.39
HNRNPC-232ENST00000557442 ADCY10Q96PN6 1610 aa17.46■□□□□ 0.39
HNRNPC-232ENST00000557442 SAMD9Q5K651 1589 aa17.46■□□□□ 0.39
HNRNPC-232ENST00000557442 EHMT2Q96KQ7 1210 aa17.44■□□□□ 0.38
HNRNPC-232ENST00000557442 TNIKQ9UKE5 1360 aa17.44■□□□□ 0.38
HNRNPC-232ENST00000557442 PTPRGP23470 1445 aa17.41■□□□□ 0.38
HNRNPC-232ENST00000557442 TTBK1Q5TCY1 1321 aaPredicted RBP17.41■□□□□ 0.38
HNRNPC-232ENST00000557442 UBTFP17480 764 aaKnown RBP17.38■□□□□ 0.37
HNRNPC-232ENST00000557442 EFCAB5A4FU69 1503 aa17.38■□□□□ 0.37
HNRNPC-232ENST00000557442 ABCC2Q92887 1545 aa17.35■□□□□ 0.37
HNRNPC-232ENST00000557442 RANGAP1P46060 587 aaPredicted RBP17.34■□□□□ 0.37
HNRNPC-232ENST00000557442 UHRF1BP1LA0JNW5 1464 aa17.32■□□□□ 0.36
HNRNPC-232ENST00000557442 KIF13AQ9H1H9 1805 aa17.32■□□□□ 0.36
HNRNPC-232ENST00000557442 ABCA8O94911 1581 aa17.32■□□□□ 0.36
HNRNPC-232ENST00000557442 UACAQ9BZF9 1416 aa17.31■□□□□ 0.36
HNRNPC-232ENST00000557442 ZCCHC11Q5TAX3 1644 aaKnown RBP17.31■□□□□ 0.36
HNRNPC-232ENST00000557442 P3H3Q8IVL6 736 aa17.3■□□□□ 0.36
HNRNPC-232ENST00000557442 MAPKBP1O60336 1514 aa17.3■□□□□ 0.36
HNRNPC-232ENST00000557442 PLB1Q6P1J6 1458 aa17.29■□□□□ 0.36
HNRNPC-232ENST00000557442 RAPGEF6Q8TEU7 1601 aa17.29■□□□□ 0.36
HNRNPC-232ENST00000557442 FHOD3Q2V2M9 1422 aa17.29■□□□□ 0.36
HNRNPC-232ENST00000557442 NPM1P06748 294 aaKnown RBP eCLIP17.25■□□□□ 0.35
HNRNPC-232ENST00000557442 ARHGAP35Q9NRY4 1499 aa17.25■□□□□ 0.35
HNRNPC-232ENST00000557442 KDM5BQ9UGL1 1544 aa17.24■□□□□ 0.35
HNRNPC-232ENST00000557442 POTEDQ86YR6 584 aa17.23■□□□□ 0.35
HNRNPC-232ENST00000557442 TRHP20396 242 aaPredicted RBP17.22■□□□□ 0.35
HNRNPC-232ENST00000557442 DIP2BQ9P265 1576 aa17.22■□□□□ 0.35
HNRNPC-232ENST00000557442 TSPOAP1O95153 1857 aa17.18■□□□□ 0.34
HNRNPC-232ENST00000557442 HECW1Q76N89 1606 aa17.17■□□□□ 0.34
HNRNPC-232ENST00000557442 ASXL2Q76L83 1435 aa17.17■□□□□ 0.34
HNRNPC-232ENST00000557442 LRRIQ1Q96JM4 1722 aa17.16■□□□□ 0.34
HNRNPC-232ENST00000557442 ABCC10Q5T3U5 1492 aa17.16■□□□□ 0.34
HNRNPC-232ENST00000557442 CLIP1P30622 1438 aa17.16■□□□□ 0.34
HNRNPC-232ENST00000557442 NUP153P49790 1475 aaKnown RBP17.15■□□□□ 0.34
HNRNPC-232ENST00000557442 FMN1Q68DA7 1419 aa17.15■□□□□ 0.34
HNRNPC-232ENST00000557442 PCF11O94913 1555 aaKnown RBP17.14■□□□□ 0.33
HNRNPC-232ENST00000557442 WDR7Q9Y4E6 1490 aa17.12■□□□□ 0.33
HNRNPC-232ENST00000557442 CEP162Q5TB80 1403 aa17.12■□□□□ 0.33
HNRNPC-232ENST00000557442 ATP10BO94823 1461 aa17.11■□□□□ 0.33
HNRNPC-232ENST00000557442 ARID3CA6NKF2 412 aa17.11■□□□□ 0.33
HNRNPC-232ENST00000557442 GLI2P10070 1586 aa17.09■□□□□ 0.33
HNRNPC-232ENST00000557442 LOC105371045A0A1W2PR82 267 aa17.09■□□□□ 0.33
HNRNPC-232ENST00000557442 MAP3K4Q9Y6R4 1608 aa17.09■□□□□ 0.33
HNRNPC-232ENST00000557442 CFAP43Q8NDM7 1665 aa17.07■□□□□ 0.32
HNRNPC-232ENST00000557442 EPRSP07814 1512 aaKnown RBP17.07■□□□□ 0.32
HNRNPC-232ENST00000557442 CDK13Q14004 1512 aaKnown RBP17.07■□□□□ 0.32
HNRNPC-232ENST00000557442 PPRC1Q5VV67 1664 aaKnown RBP17.07■□□□□ 0.32
HNRNPC-232ENST00000557442 FAM69CQ0P6D2 419 aa17.06■□□□□ 0.32
HNRNPC-232ENST00000557442 FYCO1Q9BQS8 1478 aa17.04■□□□□ 0.32
HNRNPC-232ENST00000557442 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.03■□□□□ 0.32
HNRNPC-232ENST00000557442 FOXD1Q16676 465 aa17.03■□□□□ 0.32
HNRNPC-232ENST00000557442 HNRNPUL2Q1KMD3 747 aaKnown RBP17.03■□□□□ 0.32
HNRNPC-232ENST00000557442 CASKIN1Q8WXD9 1431 aa17.02■□□□□ 0.32
HNRNPC-232ENST00000557442 ATP1B4Q9UN42 357 aaPredicted RBP17.01■□□□□ 0.31
HNRNPC-232ENST00000557442 ABCA9Q8IUA7 1624 aa17.01■□□□□ 0.31
HNRNPC-232ENST00000557442 CCDC18Q5T9S5 1454 aa16.99■□□□□ 0.31
HNRNPC-232ENST00000557442 KCNH8Q96L42 1107 aa16.96■□□□□ 0.31
HNRNPC-232ENST00000557442 TTC37Q6PGP7 1564 aa16.95■□□□□ 0.3
HNRNPC-232ENST00000557442 KIF14Q15058 1648 aa16.95■□□□□ 0.3
HNRNPC-232ENST00000557442 KDM6BO15054 1643 aa16.93■□□□□ 0.3
HNRNPC-232ENST00000557442 MYO5CQ9NQX4 1742 aa16.93■□□□□ 0.3
HNRNPC-232ENST00000557442 TEX14Q8IWB6 1497 aa16.93■□□□□ 0.3
HNRNPC-232ENST00000557442 PLEKHD1A6NEE1 506 aa16.93■□□□□ 0.3
HNRNPC-232ENST00000557442 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.91■□□□□ 0.31e-13■■■□□ 15.2
HNRNPC-232ENST00000557442 CD109Q6YHK3 1445 aa16.91■□□□□ 0.3
HNRNPC-232ENST00000557442 VPS8Q8N3P4 1428 aa16.9■□□□□ 0.3
HNRNPC-232ENST00000557442 MAGI3Q5TCQ9 1506 aa16.89■□□□□ 0.3
HNRNPC-232ENST00000557442 TROQ12816 1431 aaPredicted RBP16.88■□□□□ 0.29
HNRNPC-232ENST00000557442 CDK11AQ9UQ88 783 aaPredicted RBP16.88■□□□□ 0.29
HNRNPC-232ENST00000557442 CFAP74Q9C0B2 1584 aa16.87■□□□□ 0.29
HNRNPC-232ENST00000557442 TIAM1Q13009 1591 aa16.85■□□□□ 0.29
HNRNPC-232ENST00000557442 CDC42BPAQ5VT25 1732 aa16.85■□□□□ 0.29
HNRNPC-232ENST00000557442 CDC42BPBQ9Y5S2 1711 aa16.84■□□□□ 0.29
HNRNPC-232ENST00000557442 EHBP1L1Q8N3D4 1523 aa16.83■□□□□ 0.28
HNRNPC-232ENST00000557442 PREX2Q70Z35 1606 aa16.83■□□□□ 0.28
HNRNPC-232ENST00000557442 SUPT6HQ7KZ85 1726 aaKnown RBP16.8■□□□□ 0.28
HNRNPC-232ENST00000557442 NEO1Q92859 1461 aa16.79■□□□□ 0.28
HNRNPC-232ENST00000557442 ARAP3Q8WWN8 1544 aa16.78■□□□□ 0.28
HNRNPC-232ENST00000557442 ITSN2Q9NZM3 1697 aa16.78■□□□□ 0.28
HNRNPC-232ENST00000557442 FANCAO15360 1455 aa16.78■□□□□ 0.28
HNRNPC-232ENST00000557442 MTUS2Q5JR59 1369 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 112.8 ms