RNA–Protein interactions for RNA: ENST00000557437.1

SEC23A-214, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 4

Gene SEC23A, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-214ENST00000557437 PRG4Q92954 1404 aaPredicted RBP25.8■■□□□ 1.72
SEC23A-214ENST00000557437 CARMIL1Q5VZK9 1371 aa25.79■■□□□ 1.72
SEC23A-214ENST00000557437 KIAA0586Q9BVV6 1533 aa25.78■■□□□ 1.72
SEC23A-214ENST00000557437 TRHP20396 242 aaPredicted RBP25.72■■□□□ 1.71
SEC23A-214ENST00000557437 RAPGEF2Q9Y4G8 1499 aa25.6■■□□□ 1.69
SEC23A-214ENST00000557437 IQGAP2Q13576 1575 aa25.54■■□□□ 1.68
SEC23A-214ENST00000557437 ADCY10Q96PN6 1610 aa25.47■■□□□ 1.67
SEC23A-214ENST00000557437 PRXQ9BXM0 1461 aa25.47■■□□□ 1.67
SEC23A-214ENST00000557437 CARMIL2Q6F5E8 1435 aa25.46■■□□□ 1.67
SEC23A-214ENST00000557437 UGGT2Q9NYU1 1516 aa25.44■■□□□ 1.66
SEC23A-214ENST00000557437 TNIKQ9UKE5 1360 aa25.44■■□□□ 1.66
SEC23A-214ENST00000557437 DISP1Q96F81 1524 aa25.43■■□□□ 1.66
SEC23A-214ENST00000557437 PTPRGP23470 1445 aa25.43■■□□□ 1.66
SEC23A-214ENST00000557437 MAPKBP1O60336 1514 aa25.4■■□□□ 1.66
SEC23A-214ENST00000557437 NPM1P06748 294 aaKnown RBP eCLIP25.37■■□□□ 1.65
SEC23A-214ENST00000557437 KIF13AQ9H1H9 1805 aa25.35■■□□□ 1.65
SEC23A-214ENST00000557437 CTTNBP2Q8WZ74 1663 aa25.35■■□□□ 1.65
SEC23A-214ENST00000557437 ABCC10Q5T3U5 1492 aa25.33■■□□□ 1.65
SEC23A-214ENST00000557437 KIAA0556O60303 1618 aa25.32■■□□□ 1.64
SEC23A-214ENST00000557437 UHRF1BP1LA0JNW5 1464 aa25.3■■□□□ 1.64
SEC23A-214ENST00000557437 CSRNP3Q8WYN3 585 aa25.3■■□□□ 1.64
SEC23A-214ENST00000557437 ABCC2Q92887 1545 aa25.28■■□□□ 1.64
SEC23A-214ENST00000557437 EEA1Q15075 1411 aa25.28■■□□□ 1.64
SEC23A-214ENST00000557437 TTBK1Q5TCY1 1321 aaPredicted RBP25.27■■□□□ 1.64
SEC23A-214ENST00000557437 UACAQ9BZF9 1416 aa25.27■■□□□ 1.64
SEC23A-214ENST00000557437 DIP2BQ9P265 1576 aa25.26■■□□□ 1.63
SEC23A-214ENST00000557437 FAM69CQ0P6D2 419 aa25.23■■□□□ 1.63
SEC23A-214ENST00000557437 GOLGA3Q08378 1498 aa25.22■■□□□ 1.63
SEC23A-214ENST00000557437 KDM5BQ9UGL1 1544 aa25.18■■□□□ 1.62
SEC23A-214ENST00000557437 ASXL2Q76L83 1435 aa25.14■■□□□ 1.62
SEC23A-214ENST00000557437 CHIC1Q5VXU3 224 aa25.14■■□□□ 1.62
SEC23A-214ENST00000557437 PLB1Q6P1J6 1458 aa25.14■■□□□ 1.61
SEC23A-214ENST00000557437 ABCA8O94911 1581 aa25.09■■□□□ 1.61
SEC23A-214ENST00000557437 ZCCHC11Q5TAX3 1644 aaKnown RBP25.08■■□□□ 1.61
SEC23A-214ENST00000557437 GLI2P10070 1586 aa25.07■■□□□ 1.6
SEC23A-214ENST00000557437 SAMD9Q5K651 1589 aa25.05■■□□□ 1.6
SEC23A-214ENST00000557437 FAM9AQ8IZU1 332 aaPredicted RBP25.05■■□□□ 1.6
SEC23A-214ENST00000557437 KIF21BO75037 1637 aa25.04■■□□□ 1.6
SEC23A-214ENST00000557437 EPRSP07814 1512 aaKnown RBP25.01■■□□□ 1.59
SEC23A-214ENST00000557437 P3H3Q8IVL6 736 aa24.97■■□□□ 1.59
SEC23A-214ENST00000557437 TSPOAP1O95153 1857 aa24.97■■□□□ 1.59
SEC23A-214ENST00000557437 WDR7Q9Y4E6 1490 aa24.96■■□□□ 1.59
SEC23A-214ENST00000557437 PPRC1Q5VV67 1664 aaKnown RBP24.95■■□□□ 1.58
SEC23A-214ENST00000557437 MAP3K4Q9Y6R4 1608 aa24.93■■□□□ 1.58
SEC23A-214ENST00000557437 KDM6BO15054 1643 aa24.91■■□□□ 1.58
SEC23A-214ENST00000557437 ATP10BO94823 1461 aa24.88■■□□□ 1.57
SEC23A-214ENST00000557437 EFCAB5A4FU69 1503 aa24.86■■□□□ 1.57
SEC23A-214ENST00000557437 RAPGEF6Q8TEU7 1601 aa24.85■■□□□ 1.57
SEC23A-214ENST00000557437 FHOD3Q2V2M9 1422 aa24.85■■□□□ 1.57
SEC23A-214ENST00000557437 RANGAP1P46060 587 aaPredicted RBP24.81■■□□□ 1.56
SEC23A-214ENST00000557437 TEX14Q8IWB6 1497 aa24.81■■□□□ 1.56
SEC23A-214ENST00000557437 NUP153P49790 1475 aaKnown RBP24.79■■□□□ 1.56
SEC23A-214ENST00000557437 CFAP43Q8NDM7 1665 aa24.78■■□□□ 1.56
SEC23A-214ENST00000557437 KCNH8Q96L42 1107 aa24.77■■□□□ 1.56
SEC23A-214ENST00000557437 COL17A1Q9UMD9 1497 aaPredicted RBP24.77■■□□□ 1.56
SEC23A-214ENST00000557437 MAGI3Q5TCQ9 1506 aa24.76■■□□□ 1.55
SEC23A-214ENST00000557437 ARID3CA6NKF2 412 aa24.76■■□□□ 1.55
SEC23A-214ENST00000557437 UBTFP17480 764 aaKnown RBP24.76■■□□□ 1.55
SEC23A-214ENST00000557437 CD109Q6YHK3 1445 aa24.76■■□□□ 1.55
SEC23A-214ENST00000557437 EHMT2Q96KQ7 1210 aa24.71■■□□□ 1.55
SEC23A-214ENST00000557437 ARHGAP35Q9NRY4 1499 aa24.7■■□□□ 1.54
SEC23A-214ENST00000557437 ABCA9Q8IUA7 1624 aa24.68■■□□□ 1.54
SEC23A-214ENST00000557437 AEBP2Q6ZN18 517 aaPredicted RBP24.67■■□□□ 1.54
SEC23A-214ENST00000557437 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.63■■□□□ 1.53
SEC23A-214ENST00000557437 HNRNPUL2Q1KMD3 747 aaKnown RBP24.63■■□□□ 1.53
SEC23A-214ENST00000557437 FMN1Q68DA7 1419 aa24.61■■□□□ 1.53
SEC23A-214ENST00000557437 PLEKHD1A6NEE1 506 aa24.57■■□□□ 1.52
SEC23A-214ENST00000557437 ARAP3Q8WWN8 1544 aa24.56■■□□□ 1.52
SEC23A-214ENST00000557437 CDK13Q14004 1512 aaKnown RBP24.55■■□□□ 1.52
SEC23A-214ENST00000557437 PHLDB1Q86UU1 1377 aa24.54■■□□□ 1.52
SEC23A-214ENST00000557437 KDM4FA0A1W2PPD8 638 aa24.54■■□□□ 1.52
SEC23A-214ENST00000557437 HECW1Q76N89 1606 aa24.53■■□□□ 1.52
SEC23A-214ENST00000557437 NEO1Q92859 1461 aa24.51■■□□□ 1.51
SEC23A-214ENST00000557437 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.49■■□□□ 1.51
SEC23A-214ENST00000557437 TTC37Q6PGP7 1564 aa24.44■■□□□ 1.5
SEC23A-214ENST00000557437 ATP1B4Q9UN42 357 aaPredicted RBP24.42■■□□□ 1.5
SEC23A-214ENST00000557437 ADGRL1O94910 1474 aa24.41■■□□□ 1.5
SEC23A-214ENST00000557437 CASKIN1Q8WXD9 1431 aa24.41■■□□□ 1.5
SEC23A-214ENST00000557437 LRRIQ1Q96JM4 1722 aa24.41■■□□□ 1.5
SEC23A-214ENST00000557437 CLIP1P30622 1438 aa24.39■■□□□ 1.5
SEC23A-214ENST00000557437 CDK11AQ9UQ88 783 aaPredicted RBP24.39■■□□□ 1.49
SEC23A-214ENST00000557437 FANCAO15360 1455 aa24.38■■□□□ 1.49
SEC23A-214ENST00000557437 PCF11O94913 1555 aaKnown RBP24.37■■□□□ 1.49
SEC23A-214ENST00000557437 FRMPD1Q5SYB0 1578 aa24.37■■□□□ 1.49
SEC23A-214ENST00000557437 RAPGEF3O95398 923 aa24.37■■□□□ 1.49
SEC23A-214ENST00000557437 AKNAQ7Z591 1439 aa24.36■■□□□ 1.49
SEC23A-214ENST00000557437 CFAP74Q9C0B2 1584 aa24.36■■□□□ 1.49
SEC23A-214ENST00000557437 PLCH2O75038 1416 aa24.35■■□□□ 1.49
SEC23A-214ENST00000557437 TROQ12816 1431 aaPredicted RBP24.35■■□□□ 1.49
SEC23A-214ENST00000557437 CCDC18Q5T9S5 1454 aa24.32■■□□□ 1.48
SEC23A-214ENST00000557437 DENND4BO75064 1496 aaPredicted RBP24.32■■□□□ 1.48
SEC23A-214ENST00000557437 FYCO1Q9BQS8 1478 aa24.32■■□□□ 1.48
SEC23A-214ENST00000557437 KIF14Q15058 1648 aa24.32■■□□□ 1.48
SEC23A-214ENST00000557437 RICTORQ6R327 1708 aa24.3■■□□□ 1.48
SEC23A-214ENST00000557437 MYO5CQ9NQX4 1742 aa24.27■■□□□ 1.48
SEC23A-214ENST00000557437 ZMYM4Q5VZL5 1548 aa24.24■■□□□ 1.47
SEC23A-214ENST00000557437 EFCAB2Q5VUJ9 269 aa24.22■■□□□ 1.47
SEC23A-214ENST00000557437 SCAPERQ9BY12 1400 aa24.21■■□□□ 1.47
SEC23A-214ENST00000557437 ARHGEF40Q8TER5 1519 aa24.2■■□□□ 1.47
SEC23A-214ENST00000557437 CEP162Q5TB80 1403 aa24.19■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms