RNA–Protein interactions for RNA: ENST00000557341.5

SNX6-210, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-210ENST00000557341 IGF1RP08069 1367 aa24.64■■□□□ 1.53
SNX6-210ENST00000557341 JPH4Q96JJ6 628 aa24.6■■□□□ 1.53
SNX6-210ENST00000557341 KIAA0586Q9BVV6 1533 aa24.6■■□□□ 1.53
SNX6-210ENST00000557341 KIF13AQ9H1H9 1805 aa24.56■■□□□ 1.52
SNX6-210ENST00000557341 CARMIL1Q5VZK9 1371 aa24.51■■□□□ 1.51
SNX6-210ENST00000557341 ADCY10Q96PN6 1610 aa24.5■■□□□ 1.51
SNX6-210ENST00000557341 IQGAP2Q13576 1575 aa24.49■■□□□ 1.51
SNX6-210ENST00000557341 MAPKBP1O60336 1514 aa24.43■■□□□ 1.5
SNX6-210ENST00000557341 CTTNBP2Q8WZ74 1663 aa24.4■■□□□ 1.5
SNX6-210ENST00000557341 RAPGEF2Q9Y4G8 1499 aa24.38■■□□□ 1.49
SNX6-210ENST00000557341 CARMIL2Q6F5E8 1435 aa24.35■■□□□ 1.49
SNX6-210ENST00000557341 DIP2BQ9P265 1576 aa24.35■■□□□ 1.49
SNX6-210ENST00000557341 NPM1P06748 294 aaKnown RBP eCLIP24.31■■□□□ 1.48
SNX6-210ENST00000557341 ABCC10Q5T3U5 1492 aa24.31■■□□□ 1.48
SNX6-210ENST00000557341 PTPRGP23470 1445 aa24.28■■□□□ 1.48
SNX6-210ENST00000557341 UGGT2Q9NYU1 1516 aa24.28■■□□□ 1.48
SNX6-210ENST00000557341 TNIKQ9UKE5 1360 aa24.28■■□□□ 1.48
SNX6-210ENST00000557341 DISP1Q96F81 1524 aa24.27■■□□□ 1.48
SNX6-210ENST00000557341 KIAA0556O60303 1618 aa24.27■■□□□ 1.48
SNX6-210ENST00000557341 TSPOAP1O95153 1857 aa24.24■■□□□ 1.47
SNX6-210ENST00000557341 ABCC2Q92887 1545 aa24.22■■□□□ 1.47
SNX6-210ENST00000557341 UHRF1BP1LA0JNW5 1464 aa24.19■■□□□ 1.46
SNX6-210ENST00000557341 TTBK1Q5TCY1 1321 aaPredicted RBP24.18■■□□□ 1.46
SNX6-210ENST00000557341 FAM69CQ0P6D2 419 aa24.18■■□□□ 1.46
SNX6-210ENST00000557341 PRXQ9BXM0 1461 aa24.15■■□□□ 1.46
SNX6-210ENST00000557341 UACAQ9BZF9 1416 aa24.14■■□□□ 1.45
SNX6-210ENST00000557341 ZCCHC11Q5TAX3 1644 aaKnown RBP24.13■■□□□ 1.45
SNX6-210ENST00000557341 KDM6BO15054 1643 aa24.11■■□□□ 1.45
SNX6-210ENST00000557341 GOLGA3Q08378 1498 aa24.1■■□□□ 1.45
SNX6-210ENST00000557341 PLB1Q6P1J6 1458 aa24.08■■□□□ 1.45
SNX6-210ENST00000557341 KDM5BQ9UGL1 1544 aa24.08■■□□□ 1.45
SNX6-210ENST00000557341 ASXL2Q76L83 1435 aa24.08■■□□□ 1.44
SNX6-210ENST00000557341 GLI2P10070 1586 aa24.08■■□□□ 1.44
SNX6-210ENST00000557341 PPRC1Q5VV67 1664 aaKnown RBP24.07■■□□□ 1.44
SNX6-210ENST00000557341 MAP3K4Q9Y6R4 1608 aa24.02■■□□□ 1.44
SNX6-210ENST00000557341 ABCA8O94911 1581 aa23.99■■□□□ 1.43
SNX6-210ENST00000557341 EPRSP07814 1512 aaKnown RBP23.96■■□□□ 1.43
SNX6-210ENST00000557341 EEA1Q15075 1411 aa23.96■■□□□ 1.43
SNX6-210ENST00000557341 AEBP2Q6ZN18 517 aaPredicted RBP23.96■■□□□ 1.43
SNX6-210ENST00000557341 SAMD9Q5K651 1589 aa23.94■■□□□ 1.42
SNX6-210ENST00000557341 WDR7Q9Y4E6 1490 aa23.92■■□□□ 1.42
SNX6-210ENST00000557341 CSRNP3Q8WYN3 585 aa23.9■■□□□ 1.42
SNX6-210ENST00000557341 CFAP43Q8NDM7 1665 aa23.89■■□□□ 1.41
SNX6-210ENST00000557341 TEX14Q8IWB6 1497 aa23.87■■□□□ 1.41
SNX6-210ENST00000557341 KIF21BO75037 1637 aa23.85■■□□□ 1.41
SNX6-210ENST00000557341 RAPGEF6Q8TEU7 1601 aa23.82■■□□□ 1.4
SNX6-210ENST00000557341 FAM9AQ8IZU1 332 aaPredicted RBP23.76■■□□□ 1.39
SNX6-210ENST00000557341 P3H3Q8IVL6 736 aa23.74■■□□□ 1.39
SNX6-210ENST00000557341 EFCAB5A4FU69 1503 aa23.72■■□□□ 1.39
SNX6-210ENST00000557341 MAGI3Q5TCQ9 1506 aa23.72■■□□□ 1.39
SNX6-210ENST00000557341 ATP10BO94823 1461 aa23.7■■□□□ 1.38
SNX6-210ENST00000557341 COL17A1Q9UMD9 1497 aaPredicted RBP23.7■■□□□ 1.38
SNX6-210ENST00000557341 CD109Q6YHK3 1445 aa23.69■■□□□ 1.38
SNX6-210ENST00000557341 ABCA9Q8IUA7 1624 aa23.69■■□□□ 1.38
SNX6-210ENST00000557341 FHOD3Q2V2M9 1422 aa23.66■■□□□ 1.38
SNX6-210ENST00000557341 KCNH8Q96L42 1107 aa23.65■■□□□ 1.38
SNX6-210ENST00000557341 NUP153P49790 1475 aaKnown RBP23.63■■□□□ 1.37
SNX6-210ENST00000557341 ARID3CA6NKF2 412 aa23.63■■□□□ 1.37
SNX6-210ENST00000557341 RANGAP1P46060 587 aaPredicted RBP23.6■■□□□ 1.37
SNX6-210ENST00000557341 KDM4FA0A1W2PPD8 638 aa23.58■■□□□ 1.37
SNX6-210ENST00000557341 ADGRL1O94910 1474 aa23.57■■□□□ 1.36
SNX6-210ENST00000557341 CHIC1Q5VXU3 224 aa23.56■■□□□ 1.36
SNX6-210ENST00000557341 ARAP3Q8WWN8 1544 aa23.54■■□□□ 1.36
SNX6-210ENST00000557341 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.51■■□□□ 1.35
SNX6-210ENST00000557341 HNRNPUL2Q1KMD3 747 aaKnown RBP23.51■■□□□ 1.35
SNX6-210ENST00000557341 CFAP74Q9C0B2 1584 aa23.48■■□□□ 1.35
SNX6-210ENST00000557341 HECW1Q76N89 1606 aa23.48■■□□□ 1.35
SNX6-210ENST00000557341 NEO1Q92859 1461 aa23.47■■□□□ 1.35
SNX6-210ENST00000557341 PHLDB1Q86UU1 1377 aa23.45■■□□□ 1.34
SNX6-210ENST00000557341 UBTFP17480 764 aaKnown RBP23.45■■□□□ 1.34
SNX6-210ENST00000557341 TTC37Q6PGP7 1564 aa23.44■■□□□ 1.34
SNX6-210ENST00000557341 CDK13Q14004 1512 aaKnown RBP23.44■■□□□ 1.34
SNX6-210ENST00000557341 ARHGAP35Q9NRY4 1499 aa23.43■■□□□ 1.34
SNX6-210ENST00000557341 EHMT2Q96KQ7 1210 aa23.43■■□□□ 1.34
SNX6-210ENST00000557341 FRMPD1Q5SYB0 1578 aa23.43■■□□□ 1.34
SNX6-210ENST00000557341 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.43■■□□□ 1.34
SNX6-210ENST00000557341 FMN1Q68DA7 1419 aa23.42■■□□□ 1.34
SNX6-210ENST00000557341 RICTORQ6R327 1708 aa23.41■■□□□ 1.34
SNX6-210ENST00000557341 LRRIQ1Q96JM4 1722 aa23.41■■□□□ 1.34
SNX6-210ENST00000557341 PLEKHD1A6NEE1 506 aa23.38■■□□□ 1.33
SNX6-210ENST00000557341 MYO5CQ9NQX4 1742 aa23.37■■□□□ 1.33
SNX6-210ENST00000557341 FANCAO15360 1455 aa23.33■■□□□ 1.33
SNX6-210ENST00000557341 ARHGEF40Q8TER5 1519 aa23.33■■□□□ 1.32
SNX6-210ENST00000557341 KIF14Q15058 1648 aa23.32■■□□□ 1.32
SNX6-210ENST00000557341 PCF11O94913 1555 aaKnown RBP23.29■■□□□ 1.32
SNX6-210ENST00000557341 RAPGEF3O95398 923 aa23.28■■□□□ 1.32
SNX6-210ENST00000557341 DENND4BO75064 1496 aaPredicted RBP23.28■■□□□ 1.32
SNX6-210ENST00000557341 ADAMTSL3P82987 1691 aa23.28■■□□□ 1.32
SNX6-210ENST00000557341 BCORL1Q5H9F3 1711 aa23.28■■□□□ 1.32
SNX6-210ENST00000557341 AKNAQ7Z591 1439 aa23.27■■□□□ 1.32
SNX6-210ENST00000557341 ZMYM4Q5VZL5 1548 aa23.27■■□□□ 1.32
SNX6-210ENST00000557341 HECW2Q9P2P5 1572 aa23.25■■□□□ 1.31
SNX6-210ENST00000557341 ATP1B4Q9UN42 357 aaPredicted RBP23.24■■□□□ 1.31
SNX6-210ENST00000557341 CCDC18Q5T9S5 1454 aa23.2■■□□□ 1.3
SNX6-210ENST00000557341 PLCH2O75038 1416 aa23.2■■□□□ 1.3
SNX6-210ENST00000557341 TROQ12816 1431 aaPredicted RBP23.2■■□□□ 1.3
SNX6-210ENST00000557341 ZFYVE16Q7Z3T8 1539 aa23.19■■□□□ 1.3
SNX6-210ENST00000557341 CLIP1P30622 1438 aa23.19■■□□□ 1.3
SNX6-210ENST00000557341 CDK11AQ9UQ88 783 aaPredicted RBP23.19■■□□□ 1.3
SNX6-210ENST00000557341 MADDQ8WXG6 1647 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms