RNA–Protein interactions for RNA: ENST00000557037.5

PSEN1-220, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-220ENST00000557037 TSPOAP1O95153 1857 aa23.34■■□□□ 1.33
PSEN1-220ENST00000557037 MAPKBP1O60336 1514 aa23.32■■□□□ 1.32
PSEN1-220ENST00000557037 JPH4Q96JJ6 628 aa23.3■■□□□ 1.32
PSEN1-220ENST00000557037 FHAD1B1AJZ9 1412 aa23.3■■□□□ 1.32
PSEN1-220ENST00000557037 ADGRL1O94910 1474 aa23.26■■□□□ 1.31
PSEN1-220ENST00000557037 HECW2Q9P2P5 1572 aa23.24■■□□□ 1.31
PSEN1-220ENST00000557037 ADCY10Q96PN6 1610 aa23.23■■□□□ 1.31
PSEN1-220ENST00000557037 WRNQ14191 1432 aaPredicted RBP eCLIP23.18■■□□□ 1.3
PSEN1-220ENST00000557037 ERICH3Q5RHP9 1530 aa23.1■■□□□ 1.29
PSEN1-220ENST00000557037 FBXO41Q8TF61 875 aa23.09■■□□□ 1.29
PSEN1-220ENST00000557037 RUSC2Q8N2Y8 1516 aa23.08■■□□□ 1.28
PSEN1-220ENST00000557037 TTBK1Q5TCY1 1321 aaPredicted RBP23.01■■□□□ 1.27
PSEN1-220ENST00000557037 PPRC1Q5VV67 1664 aaKnown RBP23■■□□□ 1.27
PSEN1-220ENST00000557037 COL17A1Q9UMD9 1497 aaPredicted RBP22.98■■□□□ 1.27
PSEN1-220ENST00000557037 TOP2BQ02880 1626 aa22.95■■□□□ 1.26
PSEN1-220ENST00000557037 BIVM-ERCC5R4GMW8 1640 aa22.93■■□□□ 1.26
PSEN1-220ENST00000557037 ASXL2Q76L83 1435 aa22.92■■□□□ 1.26
PSEN1-220ENST00000557037 PTPRGP23470 1445 aa22.91■■□□□ 1.26
PSEN1-220ENST00000557037 GLI2P10070 1586 aa22.89■■□□□ 1.26
PSEN1-220ENST00000557037 KIAA0586Q9BVV6 1533 aa22.87■■□□□ 1.25
PSEN1-220ENST00000557037 PLB1Q6P1J6 1458 aa22.87■■□□□ 1.25
PSEN1-220ENST00000557037 ABCC2Q92887 1545 aa22.87■■□□□ 1.25
PSEN1-220ENST00000557037 LMTK3Q96Q04 1460 aa22.79■■□□□ 1.24
PSEN1-220ENST00000557037 CUL7Q14999 1698 aa22.78■■□□□ 1.24
PSEN1-220ENST00000557037 TEX14Q8IWB6 1497 aa22.76■■□□□ 1.23
PSEN1-220ENST00000557037 EPRSP07814 1512 aaKnown RBP22.76■■□□□ 1.23
PSEN1-220ENST00000557037 TNIKQ9UKE5 1360 aa22.76■■□□□ 1.23
PSEN1-220ENST00000557037 MAP3K4Q9Y6R4 1608 aa22.75■■□□□ 1.23
PSEN1-220ENST00000557037 UHRF1BP1LA0JNW5 1464 aa22.68■■□□□ 1.22
PSEN1-220ENST00000557037 CARMIL2Q6F5E8 1435 aa22.68■■□□□ 1.22
PSEN1-220ENST00000557037 UACAQ9BZF9 1416 aa22.67■■□□□ 1.22
PSEN1-220ENST00000557037 IGF1RP08069 1367 aa22.66■■□□□ 1.22
PSEN1-220ENST00000557037 ILDR2Q71H61 639 aa22.61■■□□□ 1.21
PSEN1-220ENST00000557037 KIF21BO75037 1637 aa22.6■■□□□ 1.21
PSEN1-220ENST00000557037 KDM5BQ9UGL1 1544 aa22.6■■□□□ 1.21
PSEN1-220ENST00000557037 SUPT5HO00267 1087 aaKnown RBP22.59■■□□□ 1.21
PSEN1-220ENST00000557037 ZCCHC11Q5TAX3 1644 aaKnown RBP22.57■■□□□ 1.2
PSEN1-220ENST00000557037 SOCS7O14512 581 aa22.57■■□□□ 1.2
PSEN1-220ENST00000557037 PTPRMP28827 1452 aa22.54■■□□□ 1.2
PSEN1-220ENST00000557037 DISP3Q9P2K9 1392 aa22.52■■□□□ 1.2
PSEN1-220ENST00000557037 KIF27Q86VH2 1401 aa22.52■■□□□ 1.2
PSEN1-220ENST00000557037 WDR7Q9Y4E6 1490 aa22.51■■□□□ 1.19
PSEN1-220ENST00000557037 DISP1Q96F81 1524 aa22.51■■□□□ 1.19
PSEN1-220ENST00000557037 IQGAP2Q13576 1575 aa22.5■■□□□ 1.19
PSEN1-220ENST00000557037 CD109Q6YHK3 1445 aa22.5■■□□□ 1.19
PSEN1-220ENST00000557037 KCNH8Q96L42 1107 aa22.5■■□□□ 1.19
PSEN1-220ENST00000557037 CARMIL1Q5VZK9 1371 aa22.49■■□□□ 1.19
PSEN1-220ENST00000557037 MAGI3Q5TCQ9 1506 aa22.47■■□□□ 1.19
PSEN1-220ENST00000557037 PCF11O94913 1555 aaKnown RBP22.46■■□□□ 1.19
PSEN1-220ENST00000557037 ADAMTSL3P82987 1691 aa22.44■■□□□ 1.18
PSEN1-220ENST00000557037 CERKQ8TCT0 537 aa22.42■■□□□ 1.18
PSEN1-220ENST00000557037 CFAP43Q8NDM7 1665 aa22.41■■□□□ 1.18
PSEN1-220ENST00000557037 HSPA2P54652 639 aa22.4■■□□□ 1.18
PSEN1-220ENST00000557037 ARID4BQ4LE39 1312 aaPredicted RBP22.34■■□□□ 1.17
PSEN1-220ENST00000557037 ARAP3Q8WWN8 1544 aa22.33■■□□□ 1.17
PSEN1-220ENST00000557037 MADDQ8WXG6 1647 aa22.33■■□□□ 1.17
PSEN1-220ENST00000557037 KIAA0556O60303 1618 aa22.32■■□□□ 1.16
PSEN1-220ENST00000557037 PLPPR3Q6T4P5 718 aa22.32■■□□□ 1.16
PSEN1-220ENST00000557037 UGGT2Q9NYU1 1516 aa22.31■■□□□ 1.16
PSEN1-220ENST00000557037 RAPGEF3O95398 923 aa22.29■■□□□ 1.16
PSEN1-220ENST00000557037 BCORL1Q5H9F3 1711 aa22.28■■□□□ 1.16
PSEN1-220ENST00000557037 RIMS1Q86UR5 1692 aaKnown RBP22.23■■□□□ 1.15
PSEN1-220ENST00000557037 ARID3CA6NKF2 412 aa22.22■■□□□ 1.15
PSEN1-220ENST00000557037 SPATA31D1Q6ZQQ2 1576 aa22.21■■□□□ 1.15
PSEN1-220ENST00000557037 ABCA8O94911 1581 aa22.18■■□□□ 1.14
PSEN1-220ENST00000557037 PHLDB1Q86UU1 1377 aa22.15■■□□□ 1.14
PSEN1-220ENST00000557037 RAPGEF2Q9Y4G8 1499 aa22.14■■□□□ 1.13
PSEN1-220ENST00000557037 FRMPD1Q5SYB0 1578 aa22.11■■□□□ 1.13
PSEN1-220ENST00000557037 NEO1Q92859 1461 aa22.07■■□□□ 1.12
PSEN1-220ENST00000557037 ABCA9Q8IUA7 1624 aa22.06■■□□□ 1.12
PSEN1-220ENST00000557037 GOLGA3Q08378 1498 aa22.05■■□□□ 1.12
PSEN1-220ENST00000557037 ARHGEF40Q8TER5 1519 aa22.04■■□□□ 1.12
PSEN1-220ENST00000557037 ATP10BO94823 1461 aa22.03■■□□□ 1.12
PSEN1-220ENST00000557037 MLECQ14165 292 aa22.03■■□□□ 1.12
PSEN1-220ENST00000557037 POGZQ7Z3K3 1410 aa21.99■■□□□ 1.11
PSEN1-220ENST00000557037 FANCAO15360 1455 aa21.97■■□□□ 1.11
PSEN1-220ENST00000557037 CTTNBP2Q8WZ74 1663 aa21.97■■□□□ 1.11
PSEN1-220ENST00000557037 P3H3Q8IVL6 736 aa21.96■■□□□ 1.11
PSEN1-220ENST00000557037 YEATS2Q9ULM3 1422 aa21.96■■□□□ 1.11
PSEN1-220ENST00000557037 AKNAQ7Z591 1439 aa21.95■■□□□ 1.1
PSEN1-220ENST00000557037 DENND4BO75064 1496 aaPredicted RBP21.95■■□□□ 1.1
PSEN1-220ENST00000557037 SIGLEC1Q9BZZ2 1709 aa21.94■■□□□ 1.1
PSEN1-220ENST00000557037 DMRT2Q9Y5R5 561 aa21.94■■□□□ 1.1
PSEN1-220ENST00000557037 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.93■■□□□ 1.1
PSEN1-220ENST00000557037 HNRNPUL2Q1KMD3 747 aaKnown RBP21.93■■□□□ 1.1
PSEN1-220ENST00000557037 FAM9AQ8IZU1 332 aaPredicted RBP21.91■■□□□ 1.1
PSEN1-220ENST00000557037 FER1L4A9Z1Z3 1794 aa21.91■■□□□ 1.1
PSEN1-220ENST00000557037 STRCQ7RTU9 1775 aa21.91■■□□□ 1.1
PSEN1-220ENST00000557037 RICTORQ6R327 1708 aa21.91■■□□□ 1.1
PSEN1-220ENST00000557037 CEBPAP49715 358 aaPredicted RBP21.9■■□□□ 1.1
PSEN1-220ENST00000557037 TTC37Q6PGP7 1564 aa21.89■■□□□ 1.09
PSEN1-220ENST00000557037 FHOD3Q2V2M9 1422 aa21.89■■□□□ 1.09
PSEN1-220ENST00000557037 PREX1Q8TCU6 1659 aa21.88■■□□□ 1.09
PSEN1-220ENST00000557037 ZFYVE16Q7Z3T8 1539 aa21.87■■□□□ 1.09
PSEN1-220ENST00000557037 EFCAB5A4FU69 1503 aa21.81■■□□□ 1.08
PSEN1-220ENST00000557037 ZMYM4Q5VZL5 1548 aa21.8■■□□□ 1.08
PSEN1-220ENST00000557037 ARHGEF12Q9NZN5 1544 aa21.78■■□□□ 1.08
PSEN1-220ENST00000557037 PTPRTO14522 1441 aa21.78■■□□□ 1.08
PSEN1-220ENST00000557037 UHRF1BP1Q6BDS2 1440 aa21.78■■□□□ 1.08
PSEN1-220ENST00000557037 LTBP4Q8N2S1 1624 aa21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms