RNA–Protein interactions for RNA: ENST00000556994.5

SRP54-213, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRP54, Length 2,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-213ENST00000556994 SETD5Q9C0A6 1442 aa16.32■□□□□ 0.2
SRP54-213ENST00000556994 BCANQ96GW7 911 aa16.31■□□□□ 0.2
SRP54-213ENST00000556994 TIAM1Q13009 1591 aa16.31■□□□□ 0.2
SRP54-213ENST00000556994 HIRIP3Q9BW71 556 aaPredicted RBP16.31■□□□□ 0.2
SRP54-213ENST00000556994 PHLDB1Q86UU1 1377 aa16.31■□□□□ 0.2
SRP54-213ENST00000556994 CARMIL1Q5VZK9 1371 aa16.29■□□□□ 0.2
SRP54-213ENST00000556994 WDR97A6NE52 1622 aa16.29■□□□□ 0.2
SRP54-213ENST00000556994 LRRC9Q6ZRR7 1453 aa16.28■□□□□ 0.2
SRP54-213ENST00000556994 FKBP8Q14318 412 aa16.23■□□□□ 0.19
SRP54-213ENST00000556994 PRDM2Q13029 1718 aa16.22■□□□□ 0.19
SRP54-213ENST00000556994 MAP3K1Q13233 1512 aa16.22■□□□□ 0.19
SRP54-213ENST00000556994 FGD5Q6ZNL6 1462 aa16.21■□□□□ 0.19
SRP54-213ENST00000556994 PPP1R15AO75807 674 aaPredicted RBP16.2■□□□□ 0.18
SRP54-213ENST00000556994 TRIM52Q96A61 297 aa16.18■□□□□ 0.18
SRP54-213ENST00000556994 PCF11O94913 1555 aaKnown RBP16.17■□□□□ 0.18
SRP54-213ENST00000556994 FHAD1B1AJZ9 1412 aa16.16■□□□□ 0.18
SRP54-213ENST00000556994 CADPSQ9ULU8 1353 aa16.16■□□□□ 0.18
SRP54-213ENST00000556994 FHOD3Q2V2M9 1422 aa16.16■□□□□ 0.18
SRP54-213ENST00000556994 CC2D2AQ9P2K1 1620 aa16.14■□□□□ 0.17
SRP54-213ENST00000556994 CFAP43Q8NDM7 1665 aa16.12■□□□□ 0.17
SRP54-213ENST00000556994 ANP32CO43423 234 aa16.11■□□□□ 0.17
SRP54-213ENST00000556994 TIMELESSQ9UNS1 1208 aa16.11■□□□□ 0.17
SRP54-213ENST00000556994 ANP32EQ9BTT0 268 aa16.1■□□□□ 0.17
SRP54-213ENST00000556994 RAD54L2Q9Y4B4 1467 aa16.07■□□□□ 0.16
SRP54-213ENST00000556994 NEFLP07196 543 aa16.07■□□□□ 0.16
SRP54-213ENST00000556994 CCER2I3L3R5 266 aa16.06■□□□□ 0.16
SRP54-213ENST00000556994 TONSLQ96HA7 1378 aa16.05■□□□□ 0.16
SRP54-213ENST00000556994 FYCO1Q9BQS8 1478 aa16.04■□□□□ 0.16
SRP54-213ENST00000556994 CASKIN1Q8WXD9 1431 aa16.03■□□□□ 0.16
SRP54-213ENST00000556994 FANCD2Q9BXW9 1451 aa16.02■□□□□ 0.16
SRP54-213ENST00000556994 PTPRKQ15262 1439 aa16.02■□□□□ 0.15
SRP54-213ENST00000556994 FGD6Q6ZV73 1430 aa16.02■□□□□ 0.15
SRP54-213ENST00000556994 RBM19Q9Y4C8 960 aaKnown RBP16■□□□□ 0.15
SRP54-213ENST00000556994 CCDC18Q5T9S5 1454 aa16■□□□□ 0.15
SRP54-213ENST00000556994 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16■□□□□ 0.15
SRP54-213ENST00000556994 MTUS2Q5JR59 1369 aa15.99■□□□□ 0.15
SRP54-213ENST00000556994 POLA1P09884 1462 aaPredicted RBP15.97■□□□□ 0.15
SRP54-213ENST00000556994 EFCAB5A4FU69 1503 aa15.96■□□□□ 0.15
SRP54-213ENST00000556994 AQRO60306 1485 aaKnown RBP eCLIP15.96■□□□□ 0.147e-11■■■■□ 23.2
SRP54-213ENST00000556994 ABCA10Q8WWZ4 1543 aa15.96■□□□□ 0.14
SRP54-213ENST00000556994 UACAQ9BZF9 1416 aa15.95■□□□□ 0.14
SRP54-213ENST00000556994 FMN1Q68DA7 1419 aa15.94■□□□□ 0.14
SRP54-213ENST00000556994 HFM1A2PYH4 1435 aa15.94■□□□□ 0.14
SRP54-213ENST00000556994 IRX6P78412 446 aaPredicted RBP15.94■□□□□ 0.14
SRP54-213ENST00000556994 TOPBP1Q92547 1522 aa15.93■□□□□ 0.14
SRP54-213ENST00000556994 HNRNPUQ00839 825 aaKnown RBP eCLIP15.93■□□□□ 0.14
SRP54-213ENST00000556994 PTPN23Q9H3S7 1636 aa15.92■□□□□ 0.14
SRP54-213ENST00000556994 DNMBPQ6XZF7 1577 aa15.92■□□□□ 0.14
SRP54-213ENST00000556994 SNAPC4Q5SXM2 1469 aa15.92■□□□□ 0.14
SRP54-213ENST00000556994 CHIC2Q9UKJ5 165 aa15.92■□□□□ 0.14
SRP54-213ENST00000556994 NAIPQ13075 1403 aa15.92■□□□□ 0.14
SRP54-213ENST00000556994 CTTNBP2Q8WZ74 1663 aa15.92■□□□□ 0.14
SRP54-213ENST00000556994 RRP7BPQ9NSQ0 103 aa15.91■□□□□ 0.14
SRP54-213ENST00000556994 NESP48681 1621 aa15.91■□□□□ 0.14
SRP54-213ENST00000556994 DNAJC5BQ9UF47 199 aa15.91■□□□□ 0.14
SRP54-213ENST00000556994 NCOA2Q15596 1464 aa15.89■□□□□ 0.13
SRP54-213ENST00000556994 LRRIQ1Q96JM4 1722 aa15.88■□□□□ 0.13
SRP54-213ENST00000556994 CUL7Q14999 1698 aa15.88■□□□□ 0.13
SRP54-213ENST00000556994 HSPA5P11021 654 aaKnown RBP15.88■□□□□ 0.13
SRP54-213ENST00000556994 TDRD9Q8NDG6 1382 aaKnown RBP15.88■□□□□ 0.13
SRP54-213ENST00000556994 MYOM3Q5VTT5 1437 aa15.87■□□□□ 0.13
SRP54-213ENST00000556994 WASHC2AQ641Q2 1341 aa15.87■□□□□ 0.13
SRP54-213ENST00000556994 KDM5BQ9UGL1 1544 aa15.86■□□□□ 0.13
SRP54-213ENST00000556994 LAMC3Q9Y6N6 1575 aa15.84■□□□□ 0.13
SRP54-213ENST00000556994 CCDC184Q52MB2 194 aa15.83■□□□□ 0.12
SRP54-213ENST00000556994 GRIN2BQ13224 1484 aa15.82■□□□□ 0.12
SRP54-213ENST00000556994 MSH5O43196 834 aa15.82■□□□□ 0.12
SRP54-213ENST00000556994 FOXD1Q16676 465 aa15.82■□□□□ 0.12
SRP54-213ENST00000556994 ARID3CA6NKF2 412 aa15.8■□□□□ 0.12
SRP54-213ENST00000556994 SUPT6HQ7KZ85 1726 aaKnown RBP15.8■□□□□ 0.12
SRP54-213ENST00000556994 SAMD9Q5K651 1589 aa15.8■□□□□ 0.12
SRP54-213ENST00000556994 EIF4G2P78344 907 aaKnown RBP eCLIP15.79■□□□□ 0.128e-7■■■■■ 28.7
SRP54-213ENST00000556994 C11orf95C9JLR9 678 aaPredicted RBP15.78■□□□□ 0.12
SRP54-213ENST00000556994 URB2Q14146 1524 aaKnown RBP15.78■□□□□ 0.12
SRP54-213ENST00000556994 MAGI3Q5TCQ9 1506 aa15.78■□□□□ 0.12
SRP54-213ENST00000556994 DENND4BO75064 1496 aaPredicted RBP15.78■□□□□ 0.12
SRP54-213ENST00000556994 FAM9BQ8IZU0 186 aa15.77■□□□□ 0.11
SRP54-213ENST00000556994 L3MBTL2Q969R5 705 aa15.77■□□□□ 0.11
SRP54-213ENST00000556994 CDK11AQ9UQ88 783 aaPredicted RBP15.77■□□□□ 0.11
SRP54-213ENST00000556994 EHBP1L1Q8N3D4 1523 aa15.76■□□□□ 0.11
SRP54-213ENST00000556994 GAPVD1Q14C86 1478 aa15.76■□□□□ 0.11
SRP54-213ENST00000556994 KDM6BO15054 1643 aa15.76■□□□□ 0.11
SRP54-213ENST00000556994 MPHOSPH9Q99550 1183 aa15.76■□□□□ 0.11
SRP54-213ENST00000556994 UGGT2Q9NYU1 1516 aa15.76■□□□□ 0.11
SRP54-213ENST00000556994 BCL11AQ9H165 835 aa15.73■□□□□ 0.11
SRP54-213ENST00000556994 CNTLNQ9NXG0 1405 aa15.72■□□□□ 0.11
SRP54-213ENST00000556994 ABCA5Q8WWZ7 1642 aa15.71■□□□□ 0.11
SRP54-213ENST00000556994 ARHGEF11O15085 1522 aa15.71■□□□□ 0.11
SRP54-213ENST00000556994 PRKRIP1Q9H875 184 aaPredicted RBP15.71■□□□□ 0.11
SRP54-213ENST00000556994 MRS2Q9HD23 443 aa15.71■□□□□ 0.1
SRP54-213ENST00000556994 THOC2Q8NI27 1593 aaKnown RBP15.7■□□□□ 0.1
SRP54-213ENST00000556994 NBPF8Q3BBV2 869 aa15.69■□□□□ 0.1
SRP54-213ENST00000556994 CNGB1Q14028 1251 aaPredicted RBP15.69■□□□□ 0.1
SRP54-213ENST00000556994 HECW1Q76N89 1606 aa15.68■□□□□ 0.1
SRP54-213ENST00000556994 CCDC7Q96M83 1385 aa15.68■□□□□ 0.1
SRP54-213ENST00000556994 TCOF1Q13428 1488 aaKnown RBP15.68■□□□□ 0.1
SRP54-213ENST00000556994 GCC2Q8IWJ2 1684 aa15.68■□□□□ 0.1
SRP54-213ENST00000556994 PPP4R2Q9NY27 417 aa15.68■□□□□ 0.1
SRP54-213ENST00000556994 B4GALNT3Q6L9W6 998 aa15.67■□□□□ 0.1
SRP54-213ENST00000556994 FANCIQ9NVI1 1328 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms