RNA–Protein interactions for RNA: ENST00000556682.5

XRCC3-216, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 4

Gene XRCC3, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-216ENST00000556682 PRG4Q92954 1404 aaPredicted RBP18.41■□□□□ 0.54
XRCC3-216ENST00000556682 CUL7Q14999 1698 aa18.41■□□□□ 0.54
XRCC3-216ENST00000556682 SHROOM2Q13796 1616 aa18.39■□□□□ 0.53
XRCC3-216ENST00000556682 ERCC6L2Q5T890 1561 aa18.38■□□□□ 0.53
XRCC3-216ENST00000556682 KIAA0586Q9BVV6 1533 aa18.37■□□□□ 0.53
XRCC3-216ENST00000556682 PHF23Q9BUL5 403 aaPredicted RBP18.35■□□□□ 0.53
XRCC3-216ENST00000556682 RUSC2Q8N2Y8 1516 aa18.33■□□□□ 0.52
XRCC3-216ENST00000556682 NPM1P06748 294 aaKnown RBP eCLIP18.26■□□□□ 0.51
XRCC3-216ENST00000556682 RAPGEF2Q9Y4G8 1499 aa18.26■□□□□ 0.51
XRCC3-216ENST00000556682 CARMIL2Q6F5E8 1435 aa18.23■□□□□ 0.51
XRCC3-216ENST00000556682 PTPRGP23470 1445 aa18.19■□□□□ 0.5
XRCC3-216ENST00000556682 IQGAP2Q13576 1575 aa18.17■□□□□ 0.5
XRCC3-216ENST00000556682 TNIKQ9UKE5 1360 aa18.17■□□□□ 0.5
XRCC3-216ENST00000556682 TTBK1Q5TCY1 1321 aaPredicted RBP18.16■□□□□ 0.5
XRCC3-216ENST00000556682 CSRNP3Q8WYN3 585 aa18.11■□□□□ 0.49
XRCC3-216ENST00000556682 PRXQ9BXM0 1461 aa18.1■□□□□ 0.49
XRCC3-216ENST00000556682 FAM69CQ0P6D2 419 aa18.08■□□□□ 0.48
XRCC3-216ENST00000556682 UGGT2Q9NYU1 1516 aa18.08■□□□□ 0.48
XRCC3-216ENST00000556682 ADCY10Q96PN6 1610 aa18.06■□□□□ 0.48
XRCC3-216ENST00000556682 MAPKBP1O60336 1514 aa18.06■□□□□ 0.48
XRCC3-216ENST00000556682 DISP1Q96F81 1524 aa18.06■□□□□ 0.48
XRCC3-216ENST00000556682 EEA1Q15075 1411 aa18.06■□□□□ 0.48
XRCC3-216ENST00000556682 FAM9AQ8IZU1 332 aaPredicted RBP18.04■□□□□ 0.48
XRCC3-216ENST00000556682 ABCC10Q5T3U5 1492 aa18.03■□□□□ 0.48
XRCC3-216ENST00000556682 UACAQ9BZF9 1416 aa18.03■□□□□ 0.48
XRCC3-216ENST00000556682 GOLGA3Q08378 1498 aa18.02■□□□□ 0.48
XRCC3-216ENST00000556682 SENP3Q9H4L4 574 aaPredicted RBP18.02■□□□□ 0.48
XRCC3-216ENST00000556682 ABCC2Q92887 1545 aa18.01■□□□□ 0.47
XRCC3-216ENST00000556682 UHRF1BP1LA0JNW5 1464 aa18.01■□□□□ 0.47
XRCC3-216ENST00000556682 KIAA0556O60303 1618 aa17.98■□□□□ 0.47
XRCC3-216ENST00000556682 CTTNBP2Q8WZ74 1663 aa17.96■□□□□ 0.47
XRCC3-216ENST00000556682 PLB1Q6P1J6 1458 aa17.95■□□□□ 0.46
XRCC3-216ENST00000556682 KIF13AQ9H1H9 1805 aa17.93■□□□□ 0.46
XRCC3-216ENST00000556682 ASXL2Q76L83 1435 aa17.93■□□□□ 0.46
XRCC3-216ENST00000556682 DIP2BQ9P265 1576 aa17.92■□□□□ 0.46
XRCC3-216ENST00000556682 KDM5BQ9UGL1 1544 aa17.91■□□□□ 0.46
XRCC3-216ENST00000556682 P3H3Q8IVL6 736 aa17.89■□□□□ 0.45
XRCC3-216ENST00000556682 RANGAP1P46060 587 aaPredicted RBP17.84■□□□□ 0.45
XRCC3-216ENST00000556682 GLI2P10070 1586 aa17.82■□□□□ 0.44
XRCC3-216ENST00000556682 UBTFP17480 764 aaKnown RBP17.81■□□□□ 0.44
XRCC3-216ENST00000556682 ABCA8O94911 1581 aa17.81■□□□□ 0.44
XRCC3-216ENST00000556682 EPRSP07814 1512 aaKnown RBP17.81■□□□□ 0.44
XRCC3-216ENST00000556682 ZCCHC11Q5TAX3 1644 aaKnown RBP17.8■□□□□ 0.44
XRCC3-216ENST00000556682 KIF21BO75037 1637 aa17.8■□□□□ 0.44
XRCC3-216ENST00000556682 WDR7Q9Y4E6 1490 aa17.79■□□□□ 0.44
XRCC3-216ENST00000556682 KCNH8Q96L42 1107 aa17.78■□□□□ 0.44
XRCC3-216ENST00000556682 SAMD9Q5K651 1589 aa17.76■□□□□ 0.43
XRCC3-216ENST00000556682 ARID3CA6NKF2 412 aa17.75■□□□□ 0.43
XRCC3-216ENST00000556682 EHMT2Q96KQ7 1210 aa17.75■□□□□ 0.43
XRCC3-216ENST00000556682 TSPOAP1O95153 1857 aa17.75■□□□□ 0.43
XRCC3-216ENST00000556682 KDM6BO15054 1643 aa17.74■□□□□ 0.43
XRCC3-216ENST00000556682 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.74■□□□□ 0.43
XRCC3-216ENST00000556682 HNRNPUL2Q1KMD3 747 aaKnown RBP17.74■□□□□ 0.43
XRCC3-216ENST00000556682 TEX14Q8IWB6 1497 aa17.73■□□□□ 0.43
XRCC3-216ENST00000556682 ATP10BO94823 1461 aa17.71■□□□□ 0.43
XRCC3-216ENST00000556682 FHOD3Q2V2M9 1422 aa17.71■□□□□ 0.43
XRCC3-216ENST00000556682 EFCAB5A4FU69 1503 aa17.69■□□□□ 0.42
XRCC3-216ENST00000556682 CD109Q6YHK3 1445 aa17.69■□□□□ 0.42
XRCC3-216ENST00000556682 MAP3K4Q9Y6R4 1608 aa17.68■□□□□ 0.42
XRCC3-216ENST00000556682 RAPGEF6Q8TEU7 1601 aa17.67■□□□□ 0.42
XRCC3-216ENST00000556682 PLEKHD1A6NEE1 506 aa17.65■□□□□ 0.42
XRCC3-216ENST00000556682 PPRC1Q5VV67 1664 aaKnown RBP17.64■□□□□ 0.41
XRCC3-216ENST00000556682 MAGI3Q5TCQ9 1506 aa17.63■□□□□ 0.41
XRCC3-216ENST00000556682 NUP153P49790 1475 aaKnown RBP17.63■□□□□ 0.41
XRCC3-216ENST00000556682 FMN1Q68DA7 1419 aa17.6■□□□□ 0.41
XRCC3-216ENST00000556682 CFAP43Q8NDM7 1665 aa17.6■□□□□ 0.41
XRCC3-216ENST00000556682 ATP1B4Q9UN42 357 aaPredicted RBP17.59■□□□□ 0.41
XRCC3-216ENST00000556682 COL17A1Q9UMD9 1497 aaPredicted RBP17.58■□□□□ 0.41
XRCC3-216ENST00000556682 PHLDB1Q86UU1 1377 aa17.56■□□□□ 0.4
XRCC3-216ENST00000556682 ARHGAP35Q9NRY4 1499 aa17.56■□□□□ 0.4
XRCC3-216ENST00000556682 CDK11AQ9UQ88 783 aaPredicted RBP17.55■□□□□ 0.4
XRCC3-216ENST00000556682 ABCA9Q8IUA7 1624 aa17.52■□□□□ 0.4
XRCC3-216ENST00000556682 KDM4FA0A1W2PPD8 638 aa17.5■□□□□ 0.39
XRCC3-216ENST00000556682 ARAP3Q8WWN8 1544 aa17.49■□□□□ 0.39
XRCC3-216ENST00000556682 NEO1Q92859 1461 aa17.48■□□□□ 0.39
XRCC3-216ENST00000556682 HECW1Q76N89 1606 aa17.46■□□□□ 0.39
XRCC3-216ENST00000556682 CDK13Q14004 1512 aaKnown RBP17.45■□□□□ 0.38
XRCC3-216ENST00000556682 RAPGEF3O95398 923 aa17.43■□□□□ 0.38
XRCC3-216ENST00000556682 CLIP1P30622 1438 aa17.42■□□□□ 0.38
XRCC3-216ENST00000556682 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.41■□□□□ 0.382e-6■■■■■ 51.7
XRCC3-216ENST00000556682 CASKIN1Q8WXD9 1431 aa17.4■□□□□ 0.38
XRCC3-216ENST00000556682 AKNAQ7Z591 1439 aa17.39■□□□□ 0.38
XRCC3-216ENST00000556682 FANCAO15360 1455 aa17.39■□□□□ 0.37
XRCC3-216ENST00000556682 ADGRL1O94910 1474 aa17.39■□□□□ 0.37
XRCC3-216ENST00000556682 PLCH2O75038 1416 aa17.38■□□□□ 0.37
XRCC3-216ENST00000556682 TROQ12816 1431 aaPredicted RBP17.38■□□□□ 0.37
XRCC3-216ENST00000556682 EFCAB2Q5VUJ9 269 aa17.37■□□□□ 0.37
XRCC3-216ENST00000556682 DENND4BO75064 1496 aaPredicted RBP17.37■□□□□ 0.37
XRCC3-216ENST00000556682 CCDC18Q5T9S5 1454 aa17.37■□□□□ 0.37
XRCC3-216ENST00000556682 TTC37Q6PGP7 1564 aa17.34■□□□□ 0.37
XRCC3-216ENST00000556682 CFAP74Q9C0B2 1584 aa17.34■□□□□ 0.37
XRCC3-216ENST00000556682 FYCO1Q9BQS8 1478 aa17.31■□□□□ 0.36
XRCC3-216ENST00000556682 KIF14Q15058 1648 aa17.31■□□□□ 0.36
XRCC3-216ENST00000556682 ARID4BQ4LE39 1312 aaPredicted RBP17.3■□□□□ 0.36
XRCC3-216ENST00000556682 PCF11O94913 1555 aaKnown RBP17.3■□□□□ 0.36
XRCC3-216ENST00000556682 SCAPERQ9BY12 1400 aa17.3■□□□□ 0.36
XRCC3-216ENST00000556682 CEP162Q5TB80 1403 aa17.26■□□□□ 0.35
XRCC3-216ENST00000556682 MAGI2Q86UL8 1455 aa17.25■□□□□ 0.35
XRCC3-216ENST00000556682 FRMPD1Q5SYB0 1578 aa17.25■□□□□ 0.35
XRCC3-216ENST00000556682 ARHGAP5Q13017 1502 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms