RNA–Protein interactions for RNA: ENST00000556682.5

XRCC3-216, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 4

Gene XRCC3, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-216ENST00000556682 NISCHQ9Y2I1 1504 aa26.39■■□□□ 1.82
XRCC3-216ENST00000556682 CCDC180Q9P1Z9 1646 aa23.51■■□□□ 1.35
XRCC3-216ENST00000556682 ABCC9O60706 1549 aa23.32■■□□□ 1.32
XRCC3-216ENST00000556682 RB1CC1Q8TDY2 1594 aa22.32■■□□□ 1.16
XRCC3-216ENST00000556682 DCAF8L2P0C7V8 631 aa22.31■■□□□ 1.16
XRCC3-216ENST00000556682 NACADO15069 1562 aa22.24■■□□□ 1.15
XRCC3-216ENST00000556682 MYO15BQ96JP2 1530 aa22.03■■□□□ 1.12
XRCC3-216ENST00000556682 ZCCHC6Q5VYS8 1495 aaKnown RBP21.91■■□□□ 1.1
XRCC3-216ENST00000556682 DCAF1Q9Y4B6 1507 aa21.83■■□□□ 1.09
XRCC3-216ENST00000556682 PABPN1Q86U42 306 aaKnown RBP eCLIP21.8■■□□□ 1.08
XRCC3-216ENST00000556682 UNC13AQ9UPW8 1703 aa21.64■■□□□ 1.06
XRCC3-216ENST00000556682 DNAJC5BQ9UF47 199 aa21.64■■□□□ 1.05
XRCC3-216ENST00000556682 BICRAQ9NZM4 1560 aa21.57■■□□□ 1.04
XRCC3-216ENST00000556682 SCRIBQ14160 1630 aa21.45■■□□□ 1.02
XRCC3-216ENST00000556682 SHROOM4Q9ULL8 1493 aa21.42■■□□□ 1.02
XRCC3-216ENST00000556682 AEBP2Q6ZN18 517 aaPredicted RBP21.31■■□□□ 1
XRCC3-216ENST00000556682 EIF4G1Q04637 1599 aaKnown RBP21.07■□□□□ 0.96
XRCC3-216ENST00000556682 CC2D2AQ9P2K1 1620 aa21.04■□□□□ 0.96
XRCC3-216ENST00000556682 CECR2Q9BXF3 1484 aa21.01■□□□□ 0.95
XRCC3-216ENST00000556682 CHIC1Q5VXU3 224 aa20.85■□□□□ 0.93
XRCC3-216ENST00000556682 NCAPD3P42695 1498 aa20.55■□□□□ 0.88
XRCC3-216ENST00000556682 ATAD2BQ9ULI0 1458 aa20.5■□□□□ 0.87
XRCC3-216ENST00000556682 SMARCA4P51532 1647 aa20.49■□□□□ 0.87
XRCC3-216ENST00000556682 BAZ1AQ9NRL2 1556 aaPredicted RBP20.49■□□□□ 0.87
XRCC3-216ENST00000556682 SMARCA2P51531 1590 aa20.46■□□□□ 0.87
XRCC3-216ENST00000556682 HMGXB3Q12766 1538 aa20.37■□□□□ 0.85
XRCC3-216ENST00000556682 BAZ1BQ9UIG0 1483 aaKnown RBP20.34■□□□□ 0.85
XRCC3-216ENST00000556682 MROH2BQ7Z745 1585 aa20.31■□□□□ 0.84
XRCC3-216ENST00000556682 PEG3Q9GZU2 1588 aa20.3■□□□□ 0.84
XRCC3-216ENST00000556682 ERCC6Q03468 1493 aa20.17■□□□□ 0.82
XRCC3-216ENST00000556682 NESP48681 1621 aa20.07■□□□□ 0.8
XRCC3-216ENST00000556682 WIZO95785 1651 aa20.04■□□□□ 0.8
XRCC3-216ENST00000556682 RSF1Q96T23 1441 aaPredicted RBP20.03■□□□□ 0.8
XRCC3-216ENST00000556682 CUX2O14529 1486 aa20.02■□□□□ 0.8
XRCC3-216ENST00000556682 LAMC3Q9Y6N6 1575 aa20.01■□□□□ 0.79
XRCC3-216ENST00000556682 PDS5BQ9NTI5 1447 aa19.97■□□□□ 0.79
XRCC3-216ENST00000556682 CADPSQ9ULU8 1353 aa19.96■□□□□ 0.79
XRCC3-216ENST00000556682 TOP2AP11388 1531 aaKnown RBP19.86■□□□□ 0.77
XRCC3-216ENST00000556682 THOC2Q8NI27 1593 aaKnown RBP19.77■□□□□ 0.76
XRCC3-216ENST00000556682 KIF21AQ7Z4S6 1674 aa19.75■□□□□ 0.75
XRCC3-216ENST00000556682 CFTRP13569 1480 aa19.75■□□□□ 0.75
XRCC3-216ENST00000556682 DNAJC5Q9H3Z4 198 aa19.75■□□□□ 0.75
XRCC3-216ENST00000556682 MRC2Q9UBG0 1479 aa19.72■□□□□ 0.75
XRCC3-216ENST00000556682 FANCD2Q9BXW9 1451 aa19.7■□□□□ 0.74
XRCC3-216ENST00000556682 CEP164Q9UPV0 1460 aa19.7■□□□□ 0.74
XRCC3-216ENST00000556682 CCDC88BA6NC98 1476 aa19.66■□□□□ 0.74
XRCC3-216ENST00000556682 WDR62O43379 1518 aa19.62■□□□□ 0.73
XRCC3-216ENST00000556682 URB2Q14146 1524 aaKnown RBP19.47■□□□□ 0.71
XRCC3-216ENST00000556682 PRDM2Q13029 1718 aa19.44■□□□□ 0.7
XRCC3-216ENST00000556682 SUPT5HO00267 1087 aaKnown RBP19.43■□□□□ 0.7
XRCC3-216ENST00000556682 ABCC8Q09428 1581 aa19.39■□□□□ 0.69
XRCC3-216ENST00000556682 TOPBP1Q92547 1522 aa19.33■□□□□ 0.68
XRCC3-216ENST00000556682 IFT140Q96RY7 1462 aa19.31■□□□□ 0.68
XRCC3-216ENST00000556682 DNMBPQ6XZF7 1577 aa19.27■□□□□ 0.68
XRCC3-216ENST00000556682 OSCARQ8IYS5 282 aa19.24■□□□□ 0.67
XRCC3-216ENST00000556682 ZNF608Q9ULD9 1512 aaPredicted RBP19.19■□□□□ 0.66
XRCC3-216ENST00000556682 POLA1P09884 1462 aaPredicted RBP19.15■□□□□ 0.66
XRCC3-216ENST00000556682 SOGA1O94964 1423 aa19.13■□□□□ 0.65
XRCC3-216ENST00000556682 AQRO60306 1485 aaKnown RBP eCLIP19.1■□□□□ 0.65
XRCC3-216ENST00000556682 TARBP1Q13395 1621 aaKnown RBP19.08■□□□□ 0.65
XRCC3-216ENST00000556682 RAD54L2Q9Y4B4 1467 aa19.08■□□□□ 0.64
XRCC3-216ENST00000556682 CUX1P39880 1505 aa19.07■□□□□ 0.64
XRCC3-216ENST00000556682 FGD5Q6ZNL6 1462 aa19.07■□□□□ 0.64
XRCC3-216ENST00000556682 EIF4G3O43432 1585 aaKnown RBP19.06■□□□□ 0.64
XRCC3-216ENST00000556682 TDRD9Q8NDG6 1382 aaKnown RBP19.05■□□□□ 0.64
XRCC3-216ENST00000556682 FBLN2P98095 1184 aa19.01■□□□□ 0.63
XRCC3-216ENST00000556682 TRIM41Q8WV44 630 aa19.01■□□□□ 0.63
XRCC3-216ENST00000556682 WDR97A6NE52 1622 aa18.96■□□□□ 0.63
XRCC3-216ENST00000556682 WRNQ14191 1432 aaPredicted RBP eCLIP18.92■□□□□ 0.62
XRCC3-216ENST00000556682 CHMP7Q8WUX9 453 aaPredicted RBP18.92■□□□□ 0.62
XRCC3-216ENST00000556682 GRIN2BQ13224 1484 aa18.91■□□□□ 0.62
XRCC3-216ENST00000556682 GAPVD1Q14C86 1478 aa18.89■□□□□ 0.61
XRCC3-216ENST00000556682 SNAPC4Q5SXM2 1469 aa18.89■□□□□ 0.61
XRCC3-216ENST00000556682 MAGI1Q96QZ7 1491 aaPredicted RBP18.89■□□□□ 0.61
XRCC3-216ENST00000556682 ABCA10Q8WWZ4 1543 aa18.89■□□□□ 0.61
XRCC3-216ENST00000556682 TOP2BQ02880 1626 aa18.84■□□□□ 0.61
XRCC3-216ENST00000556682 CHD1O14646 1710 aa18.83■□□□□ 0.61
XRCC3-216ENST00000556682 SYNJ2O15056 1496 aa18.81■□□□□ 0.6
XRCC3-216ENST00000556682 ARHGEF11O15085 1522 aa18.8■□□□□ 0.6
XRCC3-216ENST00000556682 BIVM-ERCC5R4GMW8 1640 aa18.8■□□□□ 0.6
XRCC3-216ENST00000556682 RIMBP3CA6NJZ7 1639 aa18.79■□□□□ 0.6
XRCC3-216ENST00000556682 RIMBP3BA6NNM3 1639 aa18.79■□□□□ 0.6
XRCC3-216ENST00000556682 RIMBP3Q9UFD9 1639 aa18.79■□□□□ 0.6
XRCC3-216ENST00000556682 SYNJ1O43426 1573 aa18.79■□□□□ 0.6
XRCC3-216ENST00000556682 ABCA5Q8WWZ7 1642 aa18.76■□□□□ 0.59
XRCC3-216ENST00000556682 CYB5RLQ6IPT4 315 aa18.75■□□□□ 0.59
XRCC3-216ENST00000556682 PBRM1Q86U86 1689 aa18.73■□□□□ 0.59
XRCC3-216ENST00000556682 CLASP1Q7Z460 1538 aa18.68■□□□□ 0.58
XRCC3-216ENST00000556682 FHAD1B1AJZ9 1412 aa18.66■□□□□ 0.58
XRCC3-216ENST00000556682 ERICH3Q5RHP9 1530 aa18.66■□□□□ 0.58
XRCC3-216ENST00000556682 GRIN2AQ12879 1464 aa18.65■□□□□ 0.58
XRCC3-216ENST00000556682 ARAP1Q96P48 1450 aa18.63■□□□□ 0.57
XRCC3-216ENST00000556682 ADAMTS12P58397 1594 aa18.61■□□□□ 0.57
XRCC3-216ENST00000556682 NUP160Q12769 1436 aa18.57■□□□□ 0.56
XRCC3-216ENST00000556682 KIF27Q86VH2 1401 aa18.57■□□□□ 0.56
XRCC3-216ENST00000556682 IGF1RP08069 1367 aa18.52■□□□□ 0.55
XRCC3-216ENST00000556682 CEP170Q5SW79 1584 aa18.51■□□□□ 0.55
XRCC3-216ENST00000556682 TRHP20396 242 aaPredicted RBP18.49■□□□□ 0.55
XRCC3-216ENST00000556682 JPH4Q96JJ6 628 aa18.47■□□□□ 0.55
XRCC3-216ENST00000556682 CARMIL1Q5VZK9 1371 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms