RNA–Protein interactions for RNA: ENST00000556533.5

PSEN1-217, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 550 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-217ENST00000556533 RAPGEF2Q9Y4G8 1499 aa28.54■■■□□ 2.16
PSEN1-217ENST00000556533 CSRNP3Q8WYN3 585 aa28.54■■■□□ 2.16
PSEN1-217ENST00000556533 ARAP1Q96P48 1450 aa28.53■■■□□ 2.16
PSEN1-217ENST00000556533 KIAA0586Q9BVV6 1533 aa28.48■■■□□ 2.15
PSEN1-217ENST00000556533 PRG4Q92954 1404 aaPredicted RBP28.48■■■□□ 2.15
PSEN1-217ENST00000556533 ERCC6L2Q5T890 1561 aa28.45■■■□□ 2.15
PSEN1-217ENST00000556533 EEA1Q15075 1411 aa28.43■■■□□ 2.14
PSEN1-217ENST00000556533 SHROOM2Q13796 1616 aa28.42■■■□□ 2.14
PSEN1-217ENST00000556533 PRXQ9BXM0 1461 aa28.41■■■□□ 2.14
PSEN1-217ENST00000556533 TTBK1Q5TCY1 1321 aaPredicted RBP28.3■■■□□ 2.12
PSEN1-217ENST00000556533 IQGAP2Q13576 1575 aa28.29■■■□□ 2.12
PSEN1-217ENST00000556533 EHMT2Q96KQ7 1210 aa28.28■■■□□ 2.12
PSEN1-217ENST00000556533 CARMIL2Q6F5E8 1435 aa28.24■■■□□ 2.11
PSEN1-217ENST00000556533 PTPRGP23470 1445 aa28.16■■■□□ 2.1
PSEN1-217ENST00000556533 RANGAP1P46060 587 aaPredicted RBP28.14■■■□□ 2.1
PSEN1-217ENST00000556533 UGGT2Q9NYU1 1516 aa28.13■■■□□ 2.09
PSEN1-217ENST00000556533 TNIKQ9UKE5 1360 aa28.13■■■□□ 2.09
PSEN1-217ENST00000556533 TRHP20396 242 aaPredicted RBP28.12■■■□□ 2.09
PSEN1-217ENST00000556533 DISP1Q96F81 1524 aa28.12■■■□□ 2.09
PSEN1-217ENST00000556533 CTTNBP2Q8WZ74 1663 aa28.11■■■□□ 2.09
PSEN1-217ENST00000556533 UBTFP17480 764 aaKnown RBP28.11■■■□□ 2.09
PSEN1-217ENST00000556533 KIF21BO75037 1637 aa28.07■■■□□ 2.08
PSEN1-217ENST00000556533 P3H3Q8IVL6 736 aa28.07■■■□□ 2.08
PSEN1-217ENST00000556533 NPM1P06748 294 aaKnown RBP eCLIP28.06■■■□□ 2.08
PSEN1-217ENST00000556533 GOLGA3Q08378 1498 aa28.03■■■□□ 2.08
PSEN1-217ENST00000556533 KIAA0556O60303 1618 aa28.01■■■□□ 2.07
PSEN1-217ENST00000556533 ADCY10Q96PN6 1610 aa27.92■■■□□ 2.06
PSEN1-217ENST00000556533 UACAQ9BZF9 1416 aa27.92■■■□□ 2.06
PSEN1-217ENST00000556533 UHRF1BP1LA0JNW5 1464 aa27.83■■■□□ 2.04
PSEN1-217ENST00000556533 PLB1Q6P1J6 1458 aa27.83■■■□□ 2.04
PSEN1-217ENST00000556533 ABCC2Q92887 1545 aa27.81■■■□□ 2.04
PSEN1-217ENST00000556533 SAMD9Q5K651 1589 aa27.81■■■□□ 2.04
PSEN1-217ENST00000556533 FHOD3Q2V2M9 1422 aa27.79■■■□□ 2.04
PSEN1-217ENST00000556533 ARID3CA6NKF2 412 aa27.77■■■□□ 2.04
PSEN1-217ENST00000556533 FAM69CQ0P6D2 419 aa27.74■■■□□ 2.03
PSEN1-217ENST00000556533 EFCAB5A4FU69 1503 aa27.72■■■□□ 2.03
PSEN1-217ENST00000556533 MAPKBP1O60336 1514 aa27.72■■■□□ 2.03
PSEN1-217ENST00000556533 ABCA8O94911 1581 aa27.71■■■□□ 2.03
PSEN1-217ENST00000556533 KDM5BQ9UGL1 1544 aa27.69■■■□□ 2.02
PSEN1-217ENST00000556533 ASXL2Q76L83 1435 aa27.68■■■□□ 2.02
PSEN1-217ENST00000556533 LOC105371045A0A1W2PR82 267 aa27.66■■■□□ 2.02
PSEN1-217ENST00000556533 ABCC10Q5T3U5 1492 aa27.65■■■□□ 2.02
PSEN1-217ENST00000556533 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.65■■■□□ 2.02
PSEN1-217ENST00000556533 HNRNPUL2Q1KMD3 747 aaKnown RBP27.65■■■□□ 2.02
PSEN1-217ENST00000556533 ARHGAP35Q9NRY4 1499 aa27.64■■■□□ 2.02
PSEN1-217ENST00000556533 ATP1B4Q9UN42 357 aaPredicted RBP27.63■■■□□ 2.01
PSEN1-217ENST00000556533 ZCCHC11Q5TAX3 1644 aaKnown RBP27.62■■■□□ 2.01
PSEN1-217ENST00000556533 KCNH8Q96L42 1107 aa27.58■■■□□ 2.01
PSEN1-217ENST00000556533 RAPGEF6Q8TEU7 1601 aa27.57■■■□□ 2
PSEN1-217ENST00000556533 ATP10BO94823 1461 aa27.57■■■□□ 2
PSEN1-217ENST00000556533 CLIP1P30622 1438 aa27.55■■■□□ 2
PSEN1-217ENST00000556533 DIP2BQ9P265 1576 aa27.55■■■□□ 2
PSEN1-217ENST00000556533 FMN1Q68DA7 1419 aa27.53■■■□□ 2
PSEN1-217ENST00000556533 NUP153P49790 1475 aaKnown RBP27.52■■■□□ 2
PSEN1-217ENST00000556533 KIF13AQ9H1H9 1805 aa27.52■■■□□ 2
PSEN1-217ENST00000556533 WDR7Q9Y4E6 1490 aa27.51■■□□□ 1.99
PSEN1-217ENST00000556533 EPRSP07814 1512 aaKnown RBP27.49■■□□□ 1.99
PSEN1-217ENST00000556533 PLEKHD1A6NEE1 506 aa27.43■■□□□ 1.98
PSEN1-217ENST00000556533 CEP162Q5TB80 1403 aa27.42■■□□□ 1.98
PSEN1-217ENST00000556533 GLI2P10070 1586 aa27.4■■□□□ 1.98
PSEN1-217ENST00000556533 CDK13Q14004 1512 aaKnown RBP27.36■■□□□ 1.97
PSEN1-217ENST00000556533 TSPOAP1O95153 1857 aa27.34■■□□□ 1.97
PSEN1-217ENST00000556533 HECW1Q76N89 1606 aa27.34■■□□□ 1.97
PSEN1-217ENST00000556533 CD109Q6YHK3 1445 aa27.32■■□□□ 1.96
PSEN1-217ENST00000556533 CASKIN1Q8WXD9 1431 aa27.32■■□□□ 1.96
PSEN1-217ENST00000556533 CDK11AQ9UQ88 783 aaPredicted RBP27.31■■□□□ 1.96
PSEN1-217ENST00000556533 PCF11O94913 1555 aaKnown RBP27.26■■□□□ 1.96
PSEN1-217ENST00000556533 MAP3K4Q9Y6R4 1608 aa27.26■■□□□ 1.95
PSEN1-217ENST00000556533 TEX14Q8IWB6 1497 aa27.22■■□□□ 1.95
PSEN1-217ENST00000556533 FYCO1Q9BQS8 1478 aa27.22■■□□□ 1.95
PSEN1-217ENST00000556533 PPRC1Q5VV67 1664 aaKnown RBP27.19■■□□□ 1.94
PSEN1-217ENST00000556533 CFAP43Q8NDM7 1665 aa27.17■■□□□ 1.94
PSEN1-217ENST00000556533 CCDC18Q5T9S5 1454 aa27.17■■□□□ 1.94
PSEN1-217ENST00000556533 MAGI3Q5TCQ9 1506 aa27.16■■□□□ 1.94
PSEN1-217ENST00000556533 ABCA9Q8IUA7 1624 aa27.15■■□□□ 1.94
PSEN1-217ENST00000556533 KDM6BO15054 1643 aa27.14■■□□□ 1.94
PSEN1-217ENST00000556533 TROQ12816 1431 aaPredicted RBP27.13■■□□□ 1.93
PSEN1-217ENST00000556533 LRRIQ1Q96JM4 1722 aa27.12■■□□□ 1.93
PSEN1-217ENST00000556533 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.1■■□□□ 1.93
PSEN1-217ENST00000556533 COL17A1Q9UMD9 1497 aaPredicted RBP27.08■■□□□ 1.93
PSEN1-217ENST00000556533 VPS8Q8N3P4 1428 aa27.06■■□□□ 1.92
PSEN1-217ENST00000556533 TTC37Q6PGP7 1564 aa27.04■■□□□ 1.92
PSEN1-217ENST00000556533 KIF14Q15058 1648 aa27.01■■□□□ 1.92
PSEN1-217ENST00000556533 MTUS2Q5JR59 1369 aa27■■□□□ 1.91
PSEN1-217ENST00000556533 PHLDB1Q86UU1 1377 aa26.99■■□□□ 1.91
PSEN1-217ENST00000556533 PLCH2O75038 1416 aa26.99■■□□□ 1.91
PSEN1-217ENST00000556533 FANCAO15360 1455 aa26.98■■□□□ 1.91
PSEN1-217ENST00000556533 NEO1Q92859 1461 aa26.98■■□□□ 1.91
PSEN1-217ENST00000556533 EFCAB2Q5VUJ9 269 aa26.97■■□□□ 1.91
PSEN1-217ENST00000556533 RAPGEF3O95398 923 aa26.96■■□□□ 1.91
PSEN1-217ENST00000556533 AKNAQ7Z591 1439 aa26.95■■□□□ 1.9
PSEN1-217ENST00000556533 ARAP3Q8WWN8 1544 aa26.93■■□□□ 1.9
PSEN1-217ENST00000556533 APLP2Q06481 763 aa26.91■■□□□ 1.9
PSEN1-217ENST00000556533 ARHGAP5Q13017 1502 aa26.89■■□□□ 1.89
PSEN1-217ENST00000556533 ZNF777Q9ULD5 760 aaPredicted RBP26.86■■□□□ 1.89
PSEN1-217ENST00000556533 CCNB3Q8WWL7 1395 aa26.85■■□□□ 1.89
PSEN1-217ENST00000556533 MYO5CQ9NQX4 1742 aa26.85■■□□□ 1.89
PSEN1-217ENST00000556533 DENND4BO75064 1496 aaPredicted RBP26.85■■□□□ 1.89
PSEN1-217ENST00000556533 CFAP74Q9C0B2 1584 aa26.84■■□□□ 1.89
PSEN1-217ENST00000556533 SCAPERQ9BY12 1400 aa26.84■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms