RNA–Protein interactions for RNA: ENST00000556461.1

VTI1B-206, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-206ENST00000556461 JPH4Q96JJ6 628 aa13.88□□□□□ -0.19
VTI1B-206ENST00000556461 PRG4Q92954 1404 aaPredicted RBP13.86□□□□□ -0.19
VTI1B-206ENST00000556461 KIAA0586Q9BVV6 1533 aa13.83□□□□□ -0.2
VTI1B-206ENST00000556461 RAPGEF2Q9Y4G8 1499 aa13.78□□□□□ -0.2
VTI1B-206ENST00000556461 TRHP20396 242 aaPredicted RBP13.77□□□□□ -0.21
VTI1B-206ENST00000556461 PRXQ9BXM0 1461 aa13.73□□□□□ -0.21
VTI1B-206ENST00000556461 IQGAP2Q13576 1575 aa13.71□□□□□ -0.21
VTI1B-206ENST00000556461 CHIC1Q5VXU3 224 aa13.69□□□□□ -0.22
VTI1B-206ENST00000556461 TTBK1Q5TCY1 1321 aaPredicted RBP13.68□□□□□ -0.22
VTI1B-206ENST00000556461 CSRNP3Q8WYN3 585 aa13.68□□□□□ -0.22
VTI1B-206ENST00000556461 DISP1Q96F81 1524 aa13.68□□□□□ -0.22
VTI1B-206ENST00000556461 PTPRGP23470 1445 aa13.66□□□□□ -0.22
VTI1B-206ENST00000556461 CARMIL2Q6F5E8 1435 aa13.66□□□□□ -0.22
VTI1B-206ENST00000556461 UGGT2Q9NYU1 1516 aa13.66□□□□□ -0.22
VTI1B-206ENST00000556461 FAM9AQ8IZU1 332 aaPredicted RBP13.66□□□□□ -0.22
VTI1B-206ENST00000556461 TNIKQ9UKE5 1360 aa13.66□□□□□ -0.22
VTI1B-206ENST00000556461 ADCY10Q96PN6 1610 aa13.65□□□□□ -0.22
VTI1B-206ENST00000556461 EEA1Q15075 1411 aa13.61□□□□□ -0.23
VTI1B-206ENST00000556461 KIAA0556O60303 1618 aa13.61□□□□□ -0.23
VTI1B-206ENST00000556461 CTTNBP2Q8WZ74 1663 aa13.6□□□□□ -0.23
VTI1B-206ENST00000556461 NPM1P06748 294 aaKnown RBP eCLIP13.59□□□□□ -0.23
VTI1B-206ENST00000556461 UACAQ9BZF9 1416 aa13.56□□□□□ -0.24
VTI1B-206ENST00000556461 MAPKBP1O60336 1514 aa13.56□□□□□ -0.24
VTI1B-206ENST00000556461 ABCC2Q92887 1545 aa13.55□□□□□ -0.24
VTI1B-206ENST00000556461 UHRF1BP1LA0JNW5 1464 aa13.55□□□□□ -0.24
VTI1B-206ENST00000556461 FAM69CQ0P6D2 419 aa13.54□□□□□ -0.24
VTI1B-206ENST00000556461 P3H3Q8IVL6 736 aa13.54□□□□□ -0.24
VTI1B-206ENST00000556461 ABCC10Q5T3U5 1492 aa13.54□□□□□ -0.24
VTI1B-206ENST00000556461 KIF13AQ9H1H9 1805 aa13.53□□□□□ -0.24
VTI1B-206ENST00000556461 GOLGA3Q08378 1498 aa13.53□□□□□ -0.24
VTI1B-206ENST00000556461 EHMT2Q96KQ7 1210 aa13.52□□□□□ -0.25
VTI1B-206ENST00000556461 PLB1Q6P1J6 1458 aa13.52□□□□□ -0.25
VTI1B-206ENST00000556461 DIP2BQ9P265 1576 aa13.51□□□□□ -0.25
VTI1B-206ENST00000556461 KIF21BO75037 1637 aa13.5□□□□□ -0.25
VTI1B-206ENST00000556461 RANGAP1P46060 587 aaPredicted RBP13.5□□□□□ -0.25
VTI1B-206ENST00000556461 KDM5BQ9UGL1 1544 aa13.49□□□□□ -0.25
VTI1B-206ENST00000556461 ASXL2Q76L83 1435 aa13.49□□□□□ -0.25
VTI1B-206ENST00000556461 ABCA8O94911 1581 aa13.48□□□□□ -0.25
VTI1B-206ENST00000556461 SAMD9Q5K651 1589 aa13.47□□□□□ -0.25
VTI1B-206ENST00000556461 ZCCHC11Q5TAX3 1644 aaKnown RBP13.46□□□□□ -0.26
VTI1B-206ENST00000556461 ARID3CA6NKF2 412 aa13.43□□□□□ -0.26
VTI1B-206ENST00000556461 FHOD3Q2V2M9 1422 aa13.43□□□□□ -0.26
VTI1B-206ENST00000556461 UBTFP17480 764 aaKnown RBP13.42□□□□□ -0.26
VTI1B-206ENST00000556461 EPRSP07814 1512 aaKnown RBP13.42□□□□□ -0.26
VTI1B-206ENST00000556461 GLI2P10070 1586 aa13.4□□□□□ -0.26
VTI1B-206ENST00000556461 ATP10BO94823 1461 aa13.39□□□□□ -0.27
VTI1B-206ENST00000556461 TSPOAP1O95153 1857 aa13.38□□□□□ -0.27
VTI1B-206ENST00000556461 WDR7Q9Y4E6 1490 aa13.38□□□□□ -0.27
VTI1B-206ENST00000556461 EFCAB5A4FU69 1503 aa13.36□□□□□ -0.27
VTI1B-206ENST00000556461 KCNH8Q96L42 1107 aa13.36□□□□□ -0.27
VTI1B-206ENST00000556461 PPRC1Q5VV67 1664 aaKnown RBP13.36□□□□□ -0.27
VTI1B-206ENST00000556461 RAPGEF6Q8TEU7 1601 aa13.35□□□□□ -0.27
VTI1B-206ENST00000556461 NUP153P49790 1475 aaKnown RBP13.35□□□□□ -0.27
VTI1B-206ENST00000556461 ARHGAP35Q9NRY4 1499 aa13.34□□□□□ -0.27
VTI1B-206ENST00000556461 MAP3K4Q9Y6R4 1608 aa13.33□□□□□ -0.28
VTI1B-206ENST00000556461 KDM6BO15054 1643 aa13.31□□□□□ -0.28
VTI1B-206ENST00000556461 COL17A1Q9UMD9 1497 aaPredicted RBP13.3□□□□□ -0.28
VTI1B-206ENST00000556461 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.3□□□□□ -0.28
VTI1B-206ENST00000556461 HNRNPUL2Q1KMD3 747 aaKnown RBP13.3□□□□□ -0.28
VTI1B-206ENST00000556461 CD109Q6YHK3 1445 aa13.29□□□□□ -0.28
VTI1B-206ENST00000556461 CDK13Q14004 1512 aaKnown RBP13.25□□□□□ -0.29
VTI1B-206ENST00000556461 MAGI3Q5TCQ9 1506 aa13.25□□□□□ -0.29
VTI1B-206ENST00000556461 TEX14Q8IWB6 1497 aa13.25□□□□□ -0.29
VTI1B-206ENST00000556461 CFAP43Q8NDM7 1665 aa13.24□□□□□ -0.29
VTI1B-206ENST00000556461 FMN1Q68DA7 1419 aa13.24□□□□□ -0.29
VTI1B-206ENST00000556461 ATP1B4Q9UN42 357 aaPredicted RBP13.24□□□□□ -0.29
VTI1B-206ENST00000556461 ABCA9Q8IUA7 1624 aa13.22□□□□□ -0.29
VTI1B-206ENST00000556461 PLEKHD1A6NEE1 506 aa13.22□□□□□ -0.29
VTI1B-206ENST00000556461 CLIP1P30622 1438 aa13.2□□□□□ -0.3
VTI1B-206ENST00000556461 HECW1Q76N89 1606 aa13.18□□□□□ -0.3
VTI1B-206ENST00000556461 LOC105371045A0A1W2PR82 267 aa13.17□□□□□ -0.3
VTI1B-206ENST00000556461 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.17□□□□□ -0.3
VTI1B-206ENST00000556461 PCF11O94913 1555 aaKnown RBP13.16□□□□□ -0.3
VTI1B-206ENST00000556461 CASKIN1Q8WXD9 1431 aa13.16□□□□□ -0.3
VTI1B-206ENST00000556461 LRRIQ1Q96JM4 1722 aa13.16□□□□□ -0.3
VTI1B-206ENST00000556461 TTC37Q6PGP7 1564 aa13.15□□□□□ -0.3
VTI1B-206ENST00000556461 KDM4FA0A1W2PPD8 638 aa13.14□□□□□ -0.31
VTI1B-206ENST00000556461 ARAP3Q8WWN8 1544 aa13.13□□□□□ -0.31
VTI1B-206ENST00000556461 AEBP2Q6ZN18 517 aaPredicted RBP13.13□□□□□ -0.31
VTI1B-206ENST00000556461 NEO1Q92859 1461 aa13.12□□□□□ -0.31
VTI1B-206ENST00000556461 RAPGEF3O95398 923 aa13.12□□□□□ -0.31
VTI1B-206ENST00000556461 TROQ12816 1431 aaPredicted RBP13.12□□□□□ -0.31
VTI1B-206ENST00000556461 CEP162Q5TB80 1403 aa13.12□□□□□ -0.31
VTI1B-206ENST00000556461 KIF14Q15058 1648 aa13.11□□□□□ -0.31
VTI1B-206ENST00000556461 PHLDB1Q86UU1 1377 aa13.1□□□□□ -0.31
VTI1B-206ENST00000556461 CDK11AQ9UQ88 783 aaPredicted RBP13.1□□□□□ -0.31
VTI1B-206ENST00000556461 FYCO1Q9BQS8 1478 aa13.1□□□□□ -0.31
VTI1B-206ENST00000556461 AKNAQ7Z591 1439 aa13.09□□□□□ -0.31
VTI1B-206ENST00000556461 FANCAO15360 1455 aa13.09□□□□□ -0.31
VTI1B-206ENST00000556461 PLCH2O75038 1416 aa13.08□□□□□ -0.32
VTI1B-206ENST00000556461 CCDC18Q5T9S5 1454 aa13.08□□□□□ -0.32
VTI1B-206ENST00000556461 FRMPD1Q5SYB0 1578 aa13.07□□□□□ -0.32
VTI1B-206ENST00000556461 ADGRL1O94910 1474 aa13.05□□□□□ -0.32
VTI1B-206ENST00000556461 DENND4BO75064 1496 aaPredicted RBP13.04□□□□□ -0.32
VTI1B-206ENST00000556461 CFAP74Q9C0B2 1584 aa13.03□□□□□ -0.32
VTI1B-206ENST00000556461 EFCAB2Q5VUJ9 269 aa13.02□□□□□ -0.33
VTI1B-206ENST00000556461 SCAPERQ9BY12 1400 aa13.02□□□□□ -0.33
VTI1B-206ENST00000556461 RICTORQ6R327 1708 aa13.02□□□□□ -0.33
VTI1B-206ENST00000556461 MYO5CQ9NQX4 1742 aa13.02□□□□□ -0.33
VTI1B-206ENST00000556461 ARHGAP5Q13017 1502 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms