RNA–Protein interactions for RNA: ENST00000556375.5

SLIRP-206, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-206ENST00000556375 KIAA0586Q9BVV6 1533 aa19.59■□□□□ 0.73
SLIRP-206ENST00000556375 RAPGEF2Q9Y4G8 1499 aa19.55■□□□□ 0.72
SLIRP-206ENST00000556375 PRG4Q92954 1404 aaPredicted RBP19.54■□□□□ 0.72
SLIRP-206ENST00000556375 JPH4Q96JJ6 628 aa19.52■□□□□ 0.72
SLIRP-206ENST00000556375 IQGAP2Q13576 1575 aa19.51■□□□□ 0.71
SLIRP-206ENST00000556375 PRXQ9BXM0 1461 aa19.47■□□□□ 0.71
SLIRP-206ENST00000556375 CTTNBP2Q8WZ74 1663 aa19.46■□□□□ 0.71
SLIRP-206ENST00000556375 EEA1Q15075 1411 aa19.45■□□□□ 0.7
SLIRP-206ENST00000556375 UGGT2Q9NYU1 1516 aa19.39■□□□□ 0.69
SLIRP-206ENST00000556375 CARMIL2Q6F5E8 1435 aa19.37■□□□□ 0.69
SLIRP-206ENST00000556375 CHIC1Q5VXU3 224 aa19.37■□□□□ 0.69
SLIRP-206ENST00000556375 DISP1Q96F81 1524 aa19.35■□□□□ 0.69
SLIRP-206ENST00000556375 CSRNP3Q8WYN3 585 aa19.34■□□□□ 0.69
SLIRP-206ENST00000556375 KIAA0556O60303 1618 aa19.33■□□□□ 0.68
SLIRP-206ENST00000556375 ADCY10Q96PN6 1610 aa19.33■□□□□ 0.68
SLIRP-206ENST00000556375 TNIKQ9UKE5 1360 aa19.31■□□□□ 0.68
SLIRP-206ENST00000556375 KIF21BO75037 1637 aa19.29■□□□□ 0.68
SLIRP-206ENST00000556375 PTPRGP23470 1445 aa19.28■□□□□ 0.68
SLIRP-206ENST00000556375 TRHP20396 242 aaPredicted RBP19.26■□□□□ 0.67
SLIRP-206ENST00000556375 GOLGA3Q08378 1498 aa19.26■□□□□ 0.67
SLIRP-206ENST00000556375 MAPKBP1O60336 1514 aa19.23■□□□□ 0.67
SLIRP-206ENST00000556375 FAM9AQ8IZU1 332 aaPredicted RBP19.22■□□□□ 0.67
SLIRP-206ENST00000556375 UHRF1BP1LA0JNW5 1464 aa19.2■□□□□ 0.66
SLIRP-206ENST00000556375 ABCC2Q92887 1545 aa19.2■□□□□ 0.66
SLIRP-206ENST00000556375 KIF13AQ9H1H9 1805 aa19.18■□□□□ 0.66
SLIRP-206ENST00000556375 SAMD9Q5K651 1589 aa19.18■□□□□ 0.66
SLIRP-206ENST00000556375 UACAQ9BZF9 1416 aa19.17■□□□□ 0.66
SLIRP-206ENST00000556375 TTBK1Q5TCY1 1321 aaPredicted RBP19.17■□□□□ 0.66
SLIRP-206ENST00000556375 NPM1P06748 294 aaKnown RBP eCLIP19.16■□□□□ 0.66
SLIRP-206ENST00000556375 DIP2BQ9P265 1576 aa19.12■□□□□ 0.65
SLIRP-206ENST00000556375 ABCA8O94911 1581 aa19.11■□□□□ 0.65
SLIRP-206ENST00000556375 ABCC10Q5T3U5 1492 aa19.11■□□□□ 0.65
SLIRP-206ENST00000556375 KDM5BQ9UGL1 1544 aa19.1■□□□□ 0.65
SLIRP-206ENST00000556375 ZCCHC11Q5TAX3 1644 aaKnown RBP19.1■□□□□ 0.65
SLIRP-206ENST00000556375 PLB1Q6P1J6 1458 aa19.09■□□□□ 0.65
SLIRP-206ENST00000556375 EFCAB5A4FU69 1503 aa19.08■□□□□ 0.64
SLIRP-206ENST00000556375 ASXL2Q76L83 1435 aa19.04■□□□□ 0.64
SLIRP-206ENST00000556375 RAPGEF6Q8TEU7 1601 aa19■□□□□ 0.63
SLIRP-206ENST00000556375 P3H3Q8IVL6 736 aa19■□□□□ 0.63
SLIRP-206ENST00000556375 FHOD3Q2V2M9 1422 aa19■□□□□ 0.63
SLIRP-206ENST00000556375 GLI2P10070 1586 aa18.99■□□□□ 0.63
SLIRP-206ENST00000556375 FAM69CQ0P6D2 419 aa18.99■□□□□ 0.63
SLIRP-206ENST00000556375 UBTFP17480 764 aaKnown RBP18.98■□□□□ 0.63
SLIRP-206ENST00000556375 EHMT2Q96KQ7 1210 aa18.96■□□□□ 0.63
SLIRP-206ENST00000556375 WDR7Q9Y4E6 1490 aa18.96■□□□□ 0.63
SLIRP-206ENST00000556375 RANGAP1P46060 587 aaPredicted RBP18.95■□□□□ 0.62
SLIRP-206ENST00000556375 EPRSP07814 1512 aaKnown RBP18.95■□□□□ 0.62
SLIRP-206ENST00000556375 TSPOAP1O95153 1857 aa18.94■□□□□ 0.62
SLIRP-206ENST00000556375 MAP3K4Q9Y6R4 1608 aa18.92■□□□□ 0.62
SLIRP-206ENST00000556375 ARHGAP35Q9NRY4 1499 aa18.91■□□□□ 0.62
SLIRP-206ENST00000556375 PPRC1Q5VV67 1664 aaKnown RBP18.9■□□□□ 0.62
SLIRP-206ENST00000556375 ATP10BO94823 1461 aa18.9■□□□□ 0.62
SLIRP-206ENST00000556375 NUP153P49790 1475 aaKnown RBP18.9■□□□□ 0.62
SLIRP-206ENST00000556375 CFAP43Q8NDM7 1665 aa18.86■□□□□ 0.61
SLIRP-206ENST00000556375 FMN1Q68DA7 1419 aa18.85■□□□□ 0.61
SLIRP-206ENST00000556375 KDM6BO15054 1643 aa18.83■□□□□ 0.61
SLIRP-206ENST00000556375 HECW1Q76N89 1606 aa18.82■□□□□ 0.6
SLIRP-206ENST00000556375 ARID3CA6NKF2 412 aa18.82■□□□□ 0.6
SLIRP-206ENST00000556375 TEX14Q8IWB6 1497 aa18.8■□□□□ 0.6
SLIRP-206ENST00000556375 ABCA9Q8IUA7 1624 aa18.78■□□□□ 0.6
SLIRP-206ENST00000556375 CDK13Q14004 1512 aaKnown RBP18.76■□□□□ 0.59
SLIRP-206ENST00000556375 MAGI3Q5TCQ9 1506 aa18.76■□□□□ 0.59
SLIRP-206ENST00000556375 CLIP1P30622 1438 aa18.75■□□□□ 0.59
SLIRP-206ENST00000556375 CD109Q6YHK3 1445 aa18.74■□□□□ 0.59
SLIRP-206ENST00000556375 PCF11O94913 1555 aaKnown RBP18.74■□□□□ 0.59
SLIRP-206ENST00000556375 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.74■□□□□ 0.59
SLIRP-206ENST00000556375 HNRNPUL2Q1KMD3 747 aaKnown RBP18.74■□□□□ 0.59
SLIRP-206ENST00000556375 KCNH8Q96L42 1107 aa18.74■□□□□ 0.59
SLIRP-206ENST00000556375 LRRIQ1Q96JM4 1722 aa18.73■□□□□ 0.59
SLIRP-206ENST00000556375 CASKIN1Q8WXD9 1431 aa18.69■□□□□ 0.58
SLIRP-206ENST00000556375 FYCO1Q9BQS8 1478 aa18.68■□□□□ 0.58
SLIRP-206ENST00000556375 PLEKHD1A6NEE1 506 aa18.67■□□□□ 0.58
SLIRP-206ENST00000556375 CEP162Q5TB80 1403 aa18.66■□□□□ 0.58
SLIRP-206ENST00000556375 CCDC18Q5T9S5 1454 aa18.65■□□□□ 0.58
SLIRP-206ENST00000556375 COL17A1Q9UMD9 1497 aaPredicted RBP18.65■□□□□ 0.58
SLIRP-206ENST00000556375 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.65■□□□□ 0.58
SLIRP-206ENST00000556375 TTC37Q6PGP7 1564 aa18.65■□□□□ 0.58
SLIRP-206ENST00000556375 ATP1B4Q9UN42 357 aaPredicted RBP18.64■□□□□ 0.57
SLIRP-206ENST00000556375 KIF14Q15058 1648 aa18.62■□□□□ 0.57
SLIRP-206ENST00000556375 CFAP74Q9C0B2 1584 aa18.61■□□□□ 0.57
SLIRP-206ENST00000556375 NEO1Q92859 1461 aa18.61■□□□□ 0.57
SLIRP-206ENST00000556375 TROQ12816 1431 aaPredicted RBP18.6■□□□□ 0.57
SLIRP-206ENST00000556375 ARAP3Q8WWN8 1544 aa18.59■□□□□ 0.57
SLIRP-206ENST00000556375 PHLDB1Q86UU1 1377 aa18.59■□□□□ 0.57
SLIRP-206ENST00000556375 CDK11AQ9UQ88 783 aaPredicted RBP18.59■□□□□ 0.57
SLIRP-206ENST00000556375 MYO5CQ9NQX4 1742 aa18.58■□□□□ 0.57
SLIRP-206ENST00000556375 FANCAO15360 1455 aa18.53■□□□□ 0.56
SLIRP-206ENST00000556375 LOC105371045A0A1W2PR82 267 aa18.53■□□□□ 0.56
SLIRP-206ENST00000556375 FRMPD1Q5SYB0 1578 aa18.51■□□□□ 0.55
SLIRP-206ENST00000556375 PLCH2O75038 1416 aa18.5■□□□□ 0.55
SLIRP-206ENST00000556375 RICTORQ6R327 1708 aa18.49■□□□□ 0.55
SLIRP-206ENST00000556375 AKNAQ7Z591 1439 aa18.49■□□□□ 0.55
SLIRP-206ENST00000556375 PREX2Q70Z35 1606 aa18.48■□□□□ 0.55
SLIRP-206ENST00000556375 CDC42BPBQ9Y5S2 1711 aa18.46■□□□□ 0.55
SLIRP-206ENST00000556375 VPS8Q8N3P4 1428 aa18.45■□□□□ 0.54
SLIRP-206ENST00000556375 CDC42BPAQ5VT25 1732 aa18.45■□□□□ 0.54
SLIRP-206ENST00000556375 DENND4BO75064 1496 aaPredicted RBP18.45■□□□□ 0.54
SLIRP-206ENST00000556375 ARHGAP5Q13017 1502 aa18.44■□□□□ 0.54
SLIRP-206ENST00000556375 ADGRL1O94910 1474 aa18.44■□□□□ 0.54
SLIRP-206ENST00000556375 EHBP1L1Q8N3D4 1523 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms