RNA–Protein interactions for RNA: ENST00000556284.1

MTHFD1-213, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 5

Gene MTHFD1, Length 932 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-213ENST00000556284 CARMIL1Q5VZK9 1371 aa16.51■□□□□ 0.23
MTHFD1-213ENST00000556284 MAGI1Q96QZ7 1491 aaPredicted RBP16.49■□□□□ 0.23
MTHFD1-213ENST00000556284 SNAPC4Q5SXM2 1469 aa16.48■□□□□ 0.23
MTHFD1-213ENST00000556284 FHAD1B1AJZ9 1412 aa16.48■□□□□ 0.23
MTHFD1-213ENST00000556284 PBRM1Q86U86 1689 aa16.48■□□□□ 0.23
MTHFD1-213ENST00000556284 PRXQ9BXM0 1461 aa16.46■□□□□ 0.23
MTHFD1-213ENST00000556284 CUL7Q14999 1698 aa16.44■□□□□ 0.22
MTHFD1-213ENST00000556284 CHMP7Q8WUX9 453 aaPredicted RBP16.44■□□□□ 0.22
MTHFD1-213ENST00000556284 DCAF8L1A6NGE4 600 aa16.43■□□□□ 0.22
MTHFD1-213ENST00000556284 SYNJ2O15056 1496 aa16.42■□□□□ 0.22
MTHFD1-213ENST00000556284 RAPGEF2Q9Y4G8 1499 aa16.42■□□□□ 0.22
MTHFD1-213ENST00000556284 ADAMTS12P58397 1594 aa16.42■□□□□ 0.22
MTHFD1-213ENST00000556284 FBLN2P98095 1184 aa16.4■□□□□ 0.22
MTHFD1-213ENST00000556284 KIF21BO75037 1637 aa16.37■□□□□ 0.21
MTHFD1-213ENST00000556284 GRIN2AQ12879 1464 aa16.36■□□□□ 0.21
MTHFD1-213ENST00000556284 GOLGA3Q08378 1498 aa16.35■□□□□ 0.21
MTHFD1-213ENST00000556284 UBTFP17480 764 aaKnown RBP16.32■□□□□ 0.2
MTHFD1-213ENST00000556284 LOC105371045A0A1W2PR82 267 aa16.3■□□□□ 0.2
MTHFD1-213ENST00000556284 POTEDQ86YR6 584 aa16.3■□□□□ 0.2
MTHFD1-213ENST00000556284 OSCARQ8IYS5 282 aa16.29■□□□□ 0.2
MTHFD1-213ENST00000556284 NUP160Q12769 1436 aa16.28■□□□□ 0.2
MTHFD1-213ENST00000556284 ZBTB22O15209 634 aa16.28■□□□□ 0.2
MTHFD1-213ENST00000556284 FOXD4L1Q9NU39 408 aa16.27■□□□□ 0.2
MTHFD1-213ENST00000556284 CHD1O14646 1710 aa16.26■□□□□ 0.19
MTHFD1-213ENST00000556284 TNIKQ9UKE5 1360 aa16.25■□□□□ 0.19
MTHFD1-213ENST00000556284 KIAA0586Q9BVV6 1533 aa16.24■□□□□ 0.19
MTHFD1-213ENST00000556284 SLC4A2P04920 1241 aa16.22■□□□□ 0.19
MTHFD1-213ENST00000556284 CEP170Q5SW79 1584 aa16.21■□□□□ 0.19
MTHFD1-213ENST00000556284 JPH4Q96JJ6 628 aa16.17■□□□□ 0.18
MTHFD1-213ENST00000556284 IQGAP2Q13576 1575 aa16.16■□□□□ 0.18
MTHFD1-213ENST00000556284 CLASP1Q7Z460 1538 aa16.15■□□□□ 0.18
MTHFD1-213ENST00000556284 CTTNBP2Q8WZ74 1663 aa16.14■□□□□ 0.17
MTHFD1-213ENST00000556284 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.12■□□□□ 0.17
MTHFD1-213ENST00000556284 UGGT2Q9NYU1 1516 aa16.1■□□□□ 0.17
MTHFD1-213ENST00000556284 RANGAP1P46060 587 aaPredicted RBP16.1■□□□□ 0.17
MTHFD1-213ENST00000556284 CLIP1P30622 1438 aa16.08■□□□□ 0.16
MTHFD1-213ENST00000556284 CEP162Q5TB80 1403 aa16.08■□□□□ 0.16
MTHFD1-213ENST00000556284 CARMIL2Q6F5E8 1435 aa16.07■□□□□ 0.16
MTHFD1-213ENST00000556284 PRG4Q92954 1404 aaPredicted RBP16.07■□□□□ 0.16
MTHFD1-213ENST00000556284 SHROOM2Q13796 1616 aa16.06■□□□□ 0.16
MTHFD1-213ENST00000556284 EFCAB5A4FU69 1503 aa16.04■□□□□ 0.16
MTHFD1-213ENST00000556284 DISP1Q96F81 1524 aa16.04■□□□□ 0.16
MTHFD1-213ENST00000556284 ARHGAP35Q9NRY4 1499 aa16.02■□□□□ 0.15
MTHFD1-213ENST00000556284 P3H3Q8IVL6 736 aa16.01■□□□□ 0.15
MTHFD1-213ENST00000556284 SAMD9Q5K651 1589 aa16■□□□□ 0.15
MTHFD1-213ENST00000556284 KIAA0556O60303 1618 aa15.98■□□□□ 0.15
MTHFD1-213ENST00000556284 FHOD3Q2V2M9 1422 aa15.96■□□□□ 0.15
MTHFD1-213ENST00000556284 MYCNP04198 464 aaPredicted RBP15.96■□□□□ 0.15
MTHFD1-213ENST00000556284 PTPRGP23470 1445 aa15.95■□□□□ 0.14
MTHFD1-213ENST00000556284 ARAP1Q96P48 1450 aa15.95■□□□□ 0.14
MTHFD1-213ENST00000556284 ERCC6L2Q5T890 1561 aa15.95■□□□□ 0.14
MTHFD1-213ENST00000556284 ARHGEF11O15085 1522 aa15.94■□□□□ 0.14
MTHFD1-213ENST00000556284 DNAJC5Q9H3Z4 198 aa15.93■□□□□ 0.14
MTHFD1-213ENST00000556284 FMN1Q68DA7 1419 aa15.93■□□□□ 0.14
MTHFD1-213ENST00000556284 TTBK1Q5TCY1 1321 aaPredicted RBP15.9■□□□□ 0.14
MTHFD1-213ENST00000556284 VPS8Q8N3P4 1428 aa15.87■□□□□ 0.13
MTHFD1-213ENST00000556284 RIMBP3CA6NJZ7 1639 aa15.86■□□□□ 0.13
MTHFD1-213ENST00000556284 RIMBP3BA6NNM3 1639 aa15.86■□□□□ 0.13
MTHFD1-213ENST00000556284 RIMBP3Q9UFD9 1639 aa15.86■□□□□ 0.13
MTHFD1-213ENST00000556284 U3KPZ7 1027 aaPredicted RBP15.84■□□□□ 0.13
MTHFD1-213ENST00000556284 CASKIN1Q8WXD9 1431 aa15.84■□□□□ 0.13
MTHFD1-213ENST00000556284 UACAQ9BZF9 1416 aa15.84■□□□□ 0.13
MTHFD1-213ENST00000556284 CYB5RLQ6IPT4 315 aa15.83■□□□□ 0.12
MTHFD1-213ENST00000556284 PLB1Q6P1J6 1458 aa15.82■□□□□ 0.12
MTHFD1-213ENST00000556284 ABCA8O94911 1581 aa15.8■□□□□ 0.12
MTHFD1-213ENST00000556284 UHRF1BP1LA0JNW5 1464 aa15.8■□□□□ 0.12
MTHFD1-213ENST00000556284 ATP1B4Q9UN42 357 aaPredicted RBP15.8■□□□□ 0.12
MTHFD1-213ENST00000556284 FYCO1Q9BQS8 1478 aa15.79■□□□□ 0.12
MTHFD1-213ENST00000556284 ABCC2Q92887 1545 aa15.78■□□□□ 0.12
MTHFD1-213ENST00000556284 RAPGEF6Q8TEU7 1601 aa15.77■□□□□ 0.12
MTHFD1-213ENST00000556284 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.76■□□□□ 0.11
MTHFD1-213ENST00000556284 HNRNPUL2Q1KMD3 747 aaKnown RBP15.76■□□□□ 0.11
MTHFD1-213ENST00000556284 NUP153P49790 1475 aaKnown RBP15.76■□□□□ 0.11
MTHFD1-213ENST00000556284 APLP2Q06481 763 aa15.75■□□□□ 0.11
MTHFD1-213ENST00000556284 PCF11O94913 1555 aaKnown RBP15.75■□□□□ 0.11
MTHFD1-213ENST00000556284 NPM1P06748 294 aaKnown RBP eCLIP15.74■□□□□ 0.11
MTHFD1-213ENST00000556284 HECW1Q76N89 1606 aa15.74■□□□□ 0.11
MTHFD1-213ENST00000556284 EPRSP07814 1512 aaKnown RBP15.72■□□□□ 0.11
MTHFD1-213ENST00000556284 ATP10BO94823 1461 aa15.71■□□□□ 0.11
MTHFD1-213ENST00000556284 CCDC18Q5T9S5 1454 aa15.71■□□□□ 0.11
MTHFD1-213ENST00000556284 ATXN8OSP0DMR3 200 aa15.71■□□□□ 0.11
MTHFD1-213ENST00000556284 CDK11AQ9UQ88 783 aaPredicted RBP15.71■□□□□ 0.11
MTHFD1-213ENST00000556284 KDM5BQ9UGL1 1544 aa15.71■□□□□ 0.11
MTHFD1-213ENST00000556284 ADCY10Q96PN6 1610 aa15.71■□□□□ 0.11
MTHFD1-213ENST00000556284 ARID3CA6NKF2 412 aa15.7■□□□□ 0.1
MTHFD1-213ENST00000556284 SAMD1Q6SPF0 538 aaPredicted RBP15.7■□□□□ 0.1
MTHFD1-213ENST00000556284 MAP3K1Q13233 1512 aa15.69■□□□□ 0.1
MTHFD1-213ENST00000556284 RNF39Q9H2S5 420 aa15.68■□□□□ 0.1
MTHFD1-213ENST00000556284 PLEKHD1A6NEE1 506 aa15.67■□□□□ 0.1
MTHFD1-213ENST00000556284 CDK13Q14004 1512 aaKnown RBP15.65■□□□□ 0.1
MTHFD1-213ENST00000556284 TIAM1Q13009 1591 aa15.63■□□□□ 0.09
MTHFD1-213ENST00000556284 KANK4Q5T7N3 995 aaPredicted RBP15.62■□□□□ 0.09
MTHFD1-213ENST00000556284 ZCCHC11Q5TAX3 1644 aaKnown RBP15.61■□□□□ 0.09
MTHFD1-213ENST00000556284 MTUS2Q5JR59 1369 aa15.61■□□□□ 0.09
MTHFD1-213ENST00000556284 LRRIQ1Q96JM4 1722 aa15.6■□□□□ 0.09
MTHFD1-213ENST00000556284 TROQ12816 1431 aaPredicted RBP15.6■□□□□ 0.09
MTHFD1-213ENST00000556284 ASXL2Q76L83 1435 aa15.6■□□□□ 0.09
MTHFD1-213ENST00000556284 LRRC9Q6ZRR7 1453 aa15.59■□□□□ 0.09
MTHFD1-213ENST00000556284 CFAP43Q8NDM7 1665 aa15.59■□□□□ 0.09
MTHFD1-213ENST00000556284 WDR7Q9Y4E6 1490 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms