RNA–Protein interactions for RNA: ENST00000556203.1

ACTN1-217, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-217ENST00000556203 ERCC6L2Q5T890 1561 aa25.59■■□□□ 1.69
ACTN1-217ENST00000556203 RAPGEF2Q9Y4G8 1499 aa25.58■■□□□ 1.69
ACTN1-217ENST00000556203 KIAA0586Q9BVV6 1533 aa25.58■■□□□ 1.68
ACTN1-217ENST00000556203 PRG4Q92954 1404 aaPredicted RBP25.55■■□□□ 1.68
ACTN1-217ENST00000556203 CHIC1Q5VXU3 224 aa25.55■■□□□ 1.68
ACTN1-217ENST00000556203 PRXQ9BXM0 1461 aa25.47■■□□□ 1.67
ACTN1-217ENST00000556203 CSRNP3Q8WYN3 585 aa25.45■■□□□ 1.66
ACTN1-217ENST00000556203 EEA1Q15075 1411 aa25.44■■□□□ 1.66
ACTN1-217ENST00000556203 IQGAP2Q13576 1575 aa25.4■■□□□ 1.66
ACTN1-217ENST00000556203 FAM9AQ8IZU1 332 aaPredicted RBP25.39■■□□□ 1.66
ACTN1-217ENST00000556203 CARMIL2Q6F5E8 1435 aa25.31■■□□□ 1.64
ACTN1-217ENST00000556203 UGGT2Q9NYU1 1516 aa25.27■■□□□ 1.64
ACTN1-217ENST00000556203 DISP1Q96F81 1524 aa25.26■■□□□ 1.63
ACTN1-217ENST00000556203 TTBK1Q5TCY1 1321 aaPredicted RBP25.25■■□□□ 1.63
ACTN1-217ENST00000556203 TNIKQ9UKE5 1360 aa25.25■■□□□ 1.63
ACTN1-217ENST00000556203 PTPRGP23470 1445 aa25.25■■□□□ 1.63
ACTN1-217ENST00000556203 TRHP20396 242 aaPredicted RBP25.24■■□□□ 1.63
ACTN1-217ENST00000556203 CTTNBP2Q8WZ74 1663 aa25.23■■□□□ 1.63
ACTN1-217ENST00000556203 KIAA0556O60303 1618 aa25.17■■□□□ 1.62
ACTN1-217ENST00000556203 KIF21BO75037 1637 aa25.15■■□□□ 1.62
ACTN1-217ENST00000556203 GOLGA3Q08378 1498 aa25.14■■□□□ 1.61
ACTN1-217ENST00000556203 ADCY10Q96PN6 1610 aa25.13■■□□□ 1.61
ACTN1-217ENST00000556203 NPM1P06748 294 aaKnown RBP eCLIP25.12■■□□□ 1.61
ACTN1-217ENST00000556203 EHMT2Q96KQ7 1210 aa25.09■■□□□ 1.61
ACTN1-217ENST00000556203 UACAQ9BZF9 1416 aa25.07■■□□□ 1.6
ACTN1-217ENST00000556203 RANGAP1P46060 587 aaPredicted RBP25.04■■□□□ 1.6
ACTN1-217ENST00000556203 P3H3Q8IVL6 736 aa25.03■■□□□ 1.6
ACTN1-217ENST00000556203 UHRF1BP1LA0JNW5 1464 aa25.02■■□□□ 1.6
ACTN1-217ENST00000556203 UBTFP17480 764 aaKnown RBP25.02■■□□□ 1.6
ACTN1-217ENST00000556203 ABCC2Q92887 1545 aa25.01■■□□□ 1.59
ACTN1-217ENST00000556203 MAPKBP1O60336 1514 aa25■■□□□ 1.59
ACTN1-217ENST00000556203 SAMD9Q5K651 1589 aa24.97■■□□□ 1.59
ACTN1-217ENST00000556203 PLB1Q6P1J6 1458 aa24.96■■□□□ 1.59
ACTN1-217ENST00000556203 ABCC10Q5T3U5 1492 aa24.91■■□□□ 1.58
ACTN1-217ENST00000556203 KDM5BQ9UGL1 1544 aa24.91■■□□□ 1.58
ACTN1-217ENST00000556203 ABCA8O94911 1581 aa24.9■■□□□ 1.58
ACTN1-217ENST00000556203 FAM69CQ0P6D2 419 aa24.9■■□□□ 1.58
ACTN1-217ENST00000556203 FHOD3Q2V2M9 1422 aa24.88■■□□□ 1.57
ACTN1-217ENST00000556203 ASXL2Q76L83 1435 aa24.87■■□□□ 1.57
ACTN1-217ENST00000556203 EFCAB5A4FU69 1503 aa24.86■■□□□ 1.57
ACTN1-217ENST00000556203 DIP2BQ9P265 1576 aa24.84■■□□□ 1.57
ACTN1-217ENST00000556203 ZCCHC11Q5TAX3 1644 aaKnown RBP24.83■■□□□ 1.56
ACTN1-217ENST00000556203 KIF13AQ9H1H9 1805 aa24.82■■□□□ 1.56
ACTN1-217ENST00000556203 ARID3CA6NKF2 412 aa24.79■■□□□ 1.56
ACTN1-217ENST00000556203 ARHGAP35Q9NRY4 1499 aa24.75■■□□□ 1.55
ACTN1-217ENST00000556203 RAPGEF6Q8TEU7 1601 aa24.75■■□□□ 1.55
ACTN1-217ENST00000556203 ATP10BO94823 1461 aa24.72■■□□□ 1.55
ACTN1-217ENST00000556203 WDR7Q9Y4E6 1490 aa24.72■■□□□ 1.55
ACTN1-217ENST00000556203 EPRSP07814 1512 aaKnown RBP24.71■■□□□ 1.55
ACTN1-217ENST00000556203 GLI2P10070 1586 aa24.69■■□□□ 1.54
ACTN1-217ENST00000556203 NUP153P49790 1475 aaKnown RBP24.69■■□□□ 1.54
ACTN1-217ENST00000556203 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.66■■□□□ 1.54
ACTN1-217ENST00000556203 HNRNPUL2Q1KMD3 747 aaKnown RBP24.66■■□□□ 1.54
ACTN1-217ENST00000556203 FMN1Q68DA7 1419 aa24.66■■□□□ 1.54
ACTN1-217ENST00000556203 KCNH8Q96L42 1107 aa24.65■■□□□ 1.54
ACTN1-217ENST00000556203 CLIP1P30622 1438 aa24.6■■□□□ 1.53
ACTN1-217ENST00000556203 TSPOAP1O95153 1857 aa24.58■■□□□ 1.53
ACTN1-217ENST00000556203 ATP1B4Q9UN42 357 aaPredicted RBP24.58■■□□□ 1.53
ACTN1-217ENST00000556203 MAP3K4Q9Y6R4 1608 aa24.56■■□□□ 1.52
ACTN1-217ENST00000556203 LOC105371045A0A1W2PR82 267 aa24.53■■□□□ 1.52
ACTN1-217ENST00000556203 PLEKHD1A6NEE1 506 aa24.53■■□□□ 1.52
ACTN1-217ENST00000556203 PPRC1Q5VV67 1664 aaKnown RBP24.52■■□□□ 1.52
ACTN1-217ENST00000556203 CD109Q6YHK3 1445 aa24.52■■□□□ 1.52
ACTN1-217ENST00000556203 CDK13Q14004 1512 aaKnown RBP24.51■■□□□ 1.51
ACTN1-217ENST00000556203 HECW1Q76N89 1606 aa24.51■■□□□ 1.51
ACTN1-217ENST00000556203 TEX14Q8IWB6 1497 aa24.49■■□□□ 1.51
ACTN1-217ENST00000556203 CEP162Q5TB80 1403 aa24.47■■□□□ 1.51
ACTN1-217ENST00000556203 KDM6BO15054 1643 aa24.46■■□□□ 1.51
ACTN1-217ENST00000556203 MAGI3Q5TCQ9 1506 aa24.45■■□□□ 1.51
ACTN1-217ENST00000556203 CASKIN1Q8WXD9 1431 aa24.45■■□□□ 1.51
ACTN1-217ENST00000556203 CFAP43Q8NDM7 1665 aa24.45■■□□□ 1.5
ACTN1-217ENST00000556203 PCF11O94913 1555 aaKnown RBP24.43■■□□□ 1.5
ACTN1-217ENST00000556203 ABCA9Q8IUA7 1624 aa24.41■■□□□ 1.5
ACTN1-217ENST00000556203 CDK11AQ9UQ88 783 aaPredicted RBP24.4■■□□□ 1.5
ACTN1-217ENST00000556203 FYCO1Q9BQS8 1478 aa24.38■■□□□ 1.49
ACTN1-217ENST00000556203 COL17A1Q9UMD9 1497 aaPredicted RBP24.37■■□□□ 1.49
ACTN1-217ENST00000556203 CCDC18Q5T9S5 1454 aa24.35■■□□□ 1.49
ACTN1-217ENST00000556203 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.33■■□□□ 1.49
ACTN1-217ENST00000556203 LRRIQ1Q96JM4 1722 aa24.32■■□□□ 1.48
ACTN1-217ENST00000556203 TROQ12816 1431 aaPredicted RBP24.32■■□□□ 1.48
ACTN1-217ENST00000556203 TTC37Q6PGP7 1564 aa24.29■■□□□ 1.48
ACTN1-217ENST00000556203 PHLDB1Q86UU1 1377 aa24.26■■□□□ 1.47
ACTN1-217ENST00000556203 NEO1Q92859 1461 aa24.26■■□□□ 1.47
ACTN1-217ENST00000556203 KIF14Q15058 1648 aa24.24■■□□□ 1.47
ACTN1-217ENST00000556203 ARAP3Q8WWN8 1544 aa24.23■■□□□ 1.47
ACTN1-217ENST00000556203 FANCAO15360 1455 aa24.21■■□□□ 1.47
ACTN1-217ENST00000556203 PLCH2O75038 1416 aa24.21■■□□□ 1.47
ACTN1-217ENST00000556203 AKNAQ7Z591 1439 aa24.18■■□□□ 1.46
ACTN1-217ENST00000556203 VPS8Q8N3P4 1428 aa24.18■■□□□ 1.46
ACTN1-217ENST00000556203 RAPGEF3O95398 923 aa24.16■■□□□ 1.46
ACTN1-217ENST00000556203 CFAP74Q9C0B2 1584 aa24.13■■□□□ 1.45
ACTN1-217ENST00000556203 EFCAB2Q5VUJ9 269 aa24.13■■□□□ 1.45
ACTN1-217ENST00000556203 MTUS2Q5JR59 1369 aa24.13■■□□□ 1.45
ACTN1-217ENST00000556203 DENND4BO75064 1496 aaPredicted RBP24.11■■□□□ 1.45
ACTN1-217ENST00000556203 MYO5CQ9NQX4 1742 aa24.1■■□□□ 1.45
ACTN1-217ENST00000556203 ARHGAP5Q13017 1502 aa24.1■■□□□ 1.45
ACTN1-217ENST00000556203 ADGRL1O94910 1474 aa24.08■■□□□ 1.45
ACTN1-217ENST00000556203 FRMPD1Q5SYB0 1578 aa24.07■■□□□ 1.44
ACTN1-217ENST00000556203 SCAPERQ9BY12 1400 aa24.06■■□□□ 1.44
ACTN1-217ENST00000556203 EHBP1L1Q8N3D4 1523 aa24.05■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms