RNA–Protein interactions for RNA: ENST00000556119.5

ABCD4-224, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 5

Gene ABCD4, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-224ENST00000556119 FHAD1B1AJZ9 1412 aa24.6■■□□□ 1.53
ABCD4-224ENST00000556119 TSPOAP1O95153 1857 aa24.58■■□□□ 1.52
ABCD4-224ENST00000556119 NPM1P06748 294 aaKnown RBP eCLIP24.57■■□□□ 1.52
ABCD4-224ENST00000556119 JPH4Q96JJ6 628 aa24.57■■□□□ 1.52
ABCD4-224ENST00000556119 WRNQ14191 1432 aaPredicted RBP eCLIP24.52■■□□□ 1.52
ABCD4-224ENST00000556119 ADCY10Q96PN6 1610 aa24.5■■□□□ 1.51
ABCD4-224ENST00000556119 ERICH3Q5RHP9 1530 aa24.46■■□□□ 1.51
ABCD4-224ENST00000556119 RUSC2Q8N2Y8 1516 aa24.4■■□□□ 1.5
ABCD4-224ENST00000556119 ADGRL1O94910 1474 aa24.38■■□□□ 1.49
ABCD4-224ENST00000556119 BIVM-ERCC5R4GMW8 1640 aa24.37■■□□□ 1.49
ABCD4-224ENST00000556119 TOP2BQ02880 1626 aa24.35■■□□□ 1.49
ABCD4-224ENST00000556119 HECW2Q9P2P5 1572 aa24.34■■□□□ 1.49
ABCD4-224ENST00000556119 PPRC1Q5VV67 1664 aaKnown RBP24.28■■□□□ 1.48
ABCD4-224ENST00000556119 COL17A1Q9UMD9 1497 aaPredicted RBP24.19■■□□□ 1.46
ABCD4-224ENST00000556119 GLI2P10070 1586 aa24.17■■□□□ 1.46
ABCD4-224ENST00000556119 KIAA0586Q9BVV6 1533 aa24.17■■□□□ 1.46
ABCD4-224ENST00000556119 PTPRGP23470 1445 aa24.13■■□□□ 1.45
ABCD4-224ENST00000556119 ASXL2Q76L83 1435 aa24.13■■□□□ 1.45
ABCD4-224ENST00000556119 ABCC2Q92887 1545 aa24.12■■□□□ 1.45
ABCD4-224ENST00000556119 FBXO41Q8TF61 875 aa24.12■■□□□ 1.45
ABCD4-224ENST00000556119 PLB1Q6P1J6 1458 aa24.11■■□□□ 1.45
ABCD4-224ENST00000556119 TTBK1Q5TCY1 1321 aaPredicted RBP24.09■■□□□ 1.45
ABCD4-224ENST00000556119 CUL7Q14999 1698 aa24.06■■□□□ 1.44
ABCD4-224ENST00000556119 MAP3K4Q9Y6R4 1608 aa24.02■■□□□ 1.44
ABCD4-224ENST00000556119 TNIKQ9UKE5 1360 aa24■■□□□ 1.43
ABCD4-224ENST00000556119 IGF1RP08069 1367 aa23.99■■□□□ 1.43
ABCD4-224ENST00000556119 EPRSP07814 1512 aaKnown RBP23.98■■□□□ 1.43
ABCD4-224ENST00000556119 UHRF1BP1LA0JNW5 1464 aa23.96■■□□□ 1.43
ABCD4-224ENST00000556119 TEX14Q8IWB6 1497 aa23.96■■□□□ 1.43
ABCD4-224ENST00000556119 CARMIL2Q6F5E8 1435 aa23.93■■□□□ 1.42
ABCD4-224ENST00000556119 UACAQ9BZF9 1416 aa23.91■■□□□ 1.42
ABCD4-224ENST00000556119 SUPT5HO00267 1087 aaKnown RBP23.89■■□□□ 1.41
ABCD4-224ENST00000556119 KDM5BQ9UGL1 1544 aa23.89■■□□□ 1.41
ABCD4-224ENST00000556119 ZCCHC11Q5TAX3 1644 aaKnown RBP23.84■■□□□ 1.41
ABCD4-224ENST00000556119 KIF27Q86VH2 1401 aa23.82■■□□□ 1.4
ABCD4-224ENST00000556119 IQGAP2Q13576 1575 aa23.81■■□□□ 1.4
ABCD4-224ENST00000556119 DISP1Q96F81 1524 aa23.79■■□□□ 1.4
ABCD4-224ENST00000556119 KIF21BO75037 1637 aa23.78■■□□□ 1.4
ABCD4-224ENST00000556119 CARMIL1Q5VZK9 1371 aa23.78■■□□□ 1.4
ABCD4-224ENST00000556119 LMTK3Q96Q04 1460 aa23.73■■□□□ 1.39
ABCD4-224ENST00000556119 WDR7Q9Y4E6 1490 aa23.73■■□□□ 1.39
ABCD4-224ENST00000556119 MAGI3Q5TCQ9 1506 aa23.72■■□□□ 1.39
ABCD4-224ENST00000556119 CD109Q6YHK3 1445 aa23.7■■□□□ 1.38
ABCD4-224ENST00000556119 CFAP43Q8NDM7 1665 aa23.7■■□□□ 1.38
ABCD4-224ENST00000556119 PTPRMP28827 1452 aa23.68■■□□□ 1.38
ABCD4-224ENST00000556119 ADAMTSL3P82987 1691 aa23.66■■□□□ 1.38
ABCD4-224ENST00000556119 UGGT2Q9NYU1 1516 aa23.64■■□□□ 1.37
ABCD4-224ENST00000556119 KCNH8Q96L42 1107 aa23.63■■□□□ 1.37
ABCD4-224ENST00000556119 KIAA0556O60303 1618 aa23.61■■□□□ 1.37
ABCD4-224ENST00000556119 PCF11O94913 1555 aaKnown RBP23.58■■□□□ 1.37
ABCD4-224ENST00000556119 ARAP3Q8WWN8 1544 aa23.57■■□□□ 1.36
ABCD4-224ENST00000556119 ILDR2Q71H61 639 aa23.55■■□□□ 1.36
ABCD4-224ENST00000556119 SOCS7O14512 581 aa23.51■■□□□ 1.35
ABCD4-224ENST00000556119 BCORL1Q5H9F3 1711 aa23.5■■□□□ 1.35
ABCD4-224ENST00000556119 MADDQ8WXG6 1647 aa23.49■■□□□ 1.35
ABCD4-224ENST00000556119 ABCA8O94911 1581 aa23.47■■□□□ 1.35
ABCD4-224ENST00000556119 CERKQ8TCT0 537 aa23.46■■□□□ 1.35
ABCD4-224ENST00000556119 RAPGEF2Q9Y4G8 1499 aa23.44■■□□□ 1.34
ABCD4-224ENST00000556119 DISP3Q9P2K9 1392 aa23.43■■□□□ 1.34
ABCD4-224ENST00000556119 RAPGEF3O95398 923 aa23.43■■□□□ 1.34
ABCD4-224ENST00000556119 HSPA2P54652 639 aa23.43■■□□□ 1.34
ABCD4-224ENST00000556119 ARID4BQ4LE39 1312 aaPredicted RBP23.39■■□□□ 1.34
ABCD4-224ENST00000556119 PHLDB1Q86UU1 1377 aa23.39■■□□□ 1.33
ABCD4-224ENST00000556119 RIMS1Q86UR5 1692 aaKnown RBP23.38■■□□□ 1.33
ABCD4-224ENST00000556119 ABCA9Q8IUA7 1624 aa23.34■■□□□ 1.33
ABCD4-224ENST00000556119 CTTNBP2Q8WZ74 1663 aa23.34■■□□□ 1.33
ABCD4-224ENST00000556119 FRMPD1Q5SYB0 1578 aa23.33■■□□□ 1.33
ABCD4-224ENST00000556119 GOLGA3Q08378 1498 aa23.32■■□□□ 1.32
ABCD4-224ENST00000556119 ARID3CA6NKF2 412 aa23.29■■□□□ 1.32
ABCD4-224ENST00000556119 ATP10BO94823 1461 aa23.29■■□□□ 1.32
ABCD4-224ENST00000556119 NEO1Q92859 1461 aa23.29■■□□□ 1.32
ABCD4-224ENST00000556119 PLPPR3Q6T4P5 718 aa23.27■■□□□ 1.32
ABCD4-224ENST00000556119 ARHGEF40Q8TER5 1519 aa23.22■■□□□ 1.31
ABCD4-224ENST00000556119 SIGLEC1Q9BZZ2 1709 aa23.19■■□□□ 1.3
ABCD4-224ENST00000556119 RICTORQ6R327 1708 aa23.18■■□□□ 1.3
ABCD4-224ENST00000556119 SPATA31D1Q6ZQQ2 1576 aa23.18■■□□□ 1.3
ABCD4-224ENST00000556119 POGZQ7Z3K3 1410 aa23.13■■□□□ 1.29
ABCD4-224ENST00000556119 DENND4BO75064 1496 aaPredicted RBP23.12■■□□□ 1.29
ABCD4-224ENST00000556119 FANCAO15360 1455 aa23.11■■□□□ 1.29
ABCD4-224ENST00000556119 P3H3Q8IVL6 736 aa23.11■■□□□ 1.29
ABCD4-224ENST00000556119 FER1L4A9Z1Z3 1794 aa23.11■■□□□ 1.29
ABCD4-224ENST00000556119 STRCQ7RTU9 1775 aa23.11■■□□□ 1.29
ABCD4-224ENST00000556119 FHOD3Q2V2M9 1422 aa23.09■■□□□ 1.29
ABCD4-224ENST00000556119 FAM9AQ8IZU1 332 aaPredicted RBP23.09■■□□□ 1.29
ABCD4-224ENST00000556119 TTC37Q6PGP7 1564 aa23.09■■□□□ 1.29
ABCD4-224ENST00000556119 AKNAQ7Z591 1439 aa23.08■■□□□ 1.29
ABCD4-224ENST00000556119 MLECQ14165 292 aa23.08■■□□□ 1.29
ABCD4-224ENST00000556119 PREX1Q8TCU6 1659 aa23.07■■□□□ 1.28
ABCD4-224ENST00000556119 YEATS2Q9ULM3 1422 aa23.07■■□□□ 1.28
ABCD4-224ENST00000556119 ZMYM4Q5VZL5 1548 aa23.04■■□□□ 1.28
ABCD4-224ENST00000556119 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.04■■□□□ 1.28
ABCD4-224ENST00000556119 HNRNPUL2Q1KMD3 747 aaKnown RBP23.04■■□□□ 1.28
ABCD4-224ENST00000556119 DMRT2Q9Y5R5 561 aa23.04■■□□□ 1.28
ABCD4-224ENST00000556119 RAPGEF6Q8TEU7 1601 aa23.04■■□□□ 1.28
ABCD4-224ENST00000556119 ZFYVE16Q7Z3T8 1539 aa23.03■■□□□ 1.28
ABCD4-224ENST00000556119 EFCAB5A4FU69 1503 aa23.01■■□□□ 1.27
ABCD4-224ENST00000556119 PRXQ9BXM0 1461 aa22.99■■□□□ 1.27
ABCD4-224ENST00000556119 CEBPAP49715 358 aaPredicted RBP22.98■■□□□ 1.27
ABCD4-224ENST00000556119 MAGI2Q86UL8 1455 aa22.98■■□□□ 1.27
ABCD4-224ENST00000556119 CFAP74Q9C0B2 1584 aa22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 512 ms