RNA–Protein interactions for RNA: ENST00000555985.5

LINC00648-202, long intergenic non-protein coding RNA 648, humanhuman

TSL 2 BASIC

Gene LINC00648, Length 2,885 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-202ENST00000555985 ARHGEF11O15085 1522 aa6.83□□□□□ -1.32
LINC00648-202ENST00000555985 RUSC2Q8N2Y8 1516 aa6.82□□□□□ -1.32
LINC00648-202ENST00000555985 IGF1RP08069 1367 aa6.81□□□□□ -1.32
LINC00648-202ENST00000555985 KIF27Q86VH2 1401 aa6.8□□□□□ -1.32
LINC00648-202ENST00000555985 ARAP1Q96P48 1450 aa6.78□□□□□ -1.32
LINC00648-202ENST00000555985 ERCC6L2Q5T890 1561 aa6.77□□□□□ -1.33
LINC00648-202ENST00000555985 PRXQ9BXM0 1461 aa6.75□□□□□ -1.33
LINC00648-202ENST00000555985 CHMP7Q8WUX9 453 aaPredicted RBP6.74□□□□□ -1.33
LINC00648-202ENST00000555985 KIAA0586Q9BVV6 1533 aa6.74□□□□□ -1.33
LINC00648-202ENST00000555985 CTTNBP2Q8WZ74 1663 aa6.73□□□□□ -1.33
LINC00648-202ENST00000555985 CARMIL1Q5VZK9 1371 aa6.72□□□□□ -1.33
LINC00648-202ENST00000555985 RAPGEF2Q9Y4G8 1499 aa6.72□□□□□ -1.33
LINC00648-202ENST00000555985 UGGT2Q9NYU1 1516 aa6.71□□□□□ -1.34
LINC00648-202ENST00000555985 IQGAP2Q13576 1575 aa6.71□□□□□ -1.34
LINC00648-202ENST00000555985 FBLN2P98095 1184 aa6.7□□□□□ -1.34
LINC00648-202ENST00000555985 KIF21BO75037 1637 aa6.69□□□□□ -1.34
LINC00648-202ENST00000555985 EEA1Q15075 1411 aa6.69□□□□□ -1.34
LINC00648-202ENST00000555985 DISP1Q96F81 1524 aa6.69□□□□□ -1.34
LINC00648-202ENST00000555985 PRG4Q92954 1404 aaPredicted RBP6.68□□□□□ -1.34
LINC00648-202ENST00000555985 ADCY10Q96PN6 1610 aa6.67□□□□□ -1.34
LINC00648-202ENST00000555985 KIAA0556O60303 1618 aa6.67□□□□□ -1.34
LINC00648-202ENST00000555985 SAMD9Q5K651 1589 aa6.67□□□□□ -1.34
LINC00648-202ENST00000555985 TRIM41Q8WV44 630 aa6.67□□□□□ -1.34
LINC00648-202ENST00000555985 JPH4Q96JJ6 628 aa6.65□□□□□ -1.34
LINC00648-202ENST00000555985 UHRF1BP1LA0JNW5 1464 aa6.64□□□□□ -1.35
LINC00648-202ENST00000555985 MAPKBP1O60336 1514 aa6.64□□□□□ -1.35
LINC00648-202ENST00000555985 KIF13AQ9H1H9 1805 aa6.63□□□□□ -1.35
LINC00648-202ENST00000555985 CYB5RLQ6IPT4 315 aa6.62□□□□□ -1.35
LINC00648-202ENST00000555985 ABCA8O94911 1581 aa6.62□□□□□ -1.35
LINC00648-202ENST00000555985 CSRNP3Q8WYN3 585 aa6.61□□□□□ -1.35
LINC00648-202ENST00000555985 TNIKQ9UKE5 1360 aa6.6□□□□□ -1.35
LINC00648-202ENST00000555985 ABCC2Q92887 1545 aa6.6□□□□□ -1.35
LINC00648-202ENST00000555985 KDM5BQ9UGL1 1544 aa6.6□□□□□ -1.35
LINC00648-202ENST00000555985 GOLGA3Q08378 1498 aa6.59□□□□□ -1.35
LINC00648-202ENST00000555985 CARMIL2Q6F5E8 1435 aa6.59□□□□□ -1.35
LINC00648-202ENST00000555985 DIP2BQ9P265 1576 aa6.58□□□□□ -1.36
LINC00648-202ENST00000555985 ZCCHC11Q5TAX3 1644 aaKnown RBP6.58□□□□□ -1.36
LINC00648-202ENST00000555985 EFCAB5A4FU69 1503 aa6.58□□□□□ -1.36
LINC00648-202ENST00000555985 GLI2P10070 1586 aa6.57□□□□□ -1.36
LINC00648-202ENST00000555985 PTPRGP23470 1445 aa6.57□□□□□ -1.36
LINC00648-202ENST00000555985 PPRC1Q5VV67 1664 aaKnown RBP6.57□□□□□ -1.36
LINC00648-202ENST00000555985 UACAQ9BZF9 1416 aa6.57□□□□□ -1.36
LINC00648-202ENST00000555985 ABCC10Q5T3U5 1492 aa6.56□□□□□ -1.36
LINC00648-202ENST00000555985 MAP3K4Q9Y6R4 1608 aa6.55□□□□□ -1.36
LINC00648-202ENST00000555985 RAPGEF6Q8TEU7 1601 aa6.55□□□□□ -1.36
LINC00648-202ENST00000555985 PLB1Q6P1J6 1458 aa6.54□□□□□ -1.36
LINC00648-202ENST00000555985 LRRIQ1Q96JM4 1722 aa6.54□□□□□ -1.36
LINC00648-202ENST00000555985 ARHGAP35Q9NRY4 1499 aa6.53□□□□□ -1.36
LINC00648-202ENST00000555985 NUP153P49790 1475 aaKnown RBP6.52□□□□□ -1.37
LINC00648-202ENST00000555985 ASXL2Q76L83 1435 aa6.51□□□□□ -1.37
LINC00648-202ENST00000555985 EPRSP07814 1512 aaKnown RBP6.51□□□□□ -1.37
LINC00648-202ENST00000555985 ATP10BO94823 1461 aa6.51□□□□□ -1.37
LINC00648-202ENST00000555985 CFAP43Q8NDM7 1665 aa6.5□□□□□ -1.37
LINC00648-202ENST00000555985 WDR7Q9Y4E6 1490 aa6.49□□□□□ -1.37
LINC00648-202ENST00000555985 ABCA9Q8IUA7 1624 aa6.49□□□□□ -1.37
LINC00648-202ENST00000555985 FHOD3Q2V2M9 1422 aa6.49□□□□□ -1.37
LINC00648-202ENST00000555985 HECW1Q76N89 1606 aa6.47□□□□□ -1.37
LINC00648-202ENST00000555985 MAGI3Q5TCQ9 1506 aa6.46□□□□□ -1.37
LINC00648-202ENST00000555985 PCF11O94913 1555 aaKnown RBP6.46□□□□□ -1.37
LINC00648-202ENST00000555985 PPP4R3CPQ6ZMV5 832 aa6.46□□□□□ -1.38
LINC00648-202ENST00000555985 FAM9AQ8IZU1 332 aaPredicted RBP6.46□□□□□ -1.38
LINC00648-202ENST00000555985 FMN1Q68DA7 1419 aa6.45□□□□□ -1.38
LINC00648-202ENST00000555985 TSPOAP1O95153 1857 aa6.44□□□□□ -1.38
LINC00648-202ENST00000555985 CASKIN1Q8WXD9 1431 aa6.44□□□□□ -1.38
LINC00648-202ENST00000555985 SCAF1Q9H7N4 1312 aaKnown RBP6.44□□□□□ -1.38
LINC00648-202ENST00000555985 FYCO1Q9BQS8 1478 aa6.44□□□□□ -1.38
LINC00648-202ENST00000555985 TTC37Q6PGP7 1564 aa6.43□□□□□ -1.38
LINC00648-202ENST00000555985 CDK13Q14004 1512 aaKnown RBP6.43□□□□□ -1.38
LINC00648-202ENST00000555985 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.43□□□□□ -1.38
LINC00648-202ENST00000555985 FRMPD1Q5SYB0 1578 aa6.42□□□□□ -1.38
LINC00648-202ENST00000555985 ARAP3Q8WWN8 1544 aa6.42□□□□□ -1.38
LINC00648-202ENST00000555985 NPM1P06748 294 aaKnown RBP eCLIP6.42□□□□□ -1.38
LINC00648-202ENST00000555985 COL17A1Q9UMD9 1497 aaPredicted RBP6.42□□□□□ -1.38
LINC00648-202ENST00000555985 KDM6BO15054 1643 aa6.42□□□□□ -1.38
LINC00648-202ENST00000555985 FAM69CQ0P6D2 419 aa6.42□□□□□ -1.38
LINC00648-202ENST00000555985 CCDC18Q5T9S5 1454 aa6.41□□□□□ -1.38
LINC00648-202ENST00000555985 KIF14Q15058 1648 aa6.41□□□□□ -1.38
LINC00648-202ENST00000555985 TRHP20396 242 aaPredicted RBP6.41□□□□□ -1.38
LINC00648-202ENST00000555985 P3H3Q8IVL6 736 aa6.41□□□□□ -1.38
LINC00648-202ENST00000555985 CLIP1P30622 1438 aa6.41□□□□□ -1.38
LINC00648-202ENST00000555985 TEX14Q8IWB6 1497 aa6.41□□□□□ -1.38
LINC00648-202ENST00000555985 CEP162Q5TB80 1403 aa6.4□□□□□ -1.38
LINC00648-202ENST00000555985 RICTORQ6R327 1708 aa6.4□□□□□ -1.39
LINC00648-202ENST00000555985 CFAP74Q9C0B2 1584 aa6.4□□□□□ -1.39
LINC00648-202ENST00000555985 MYO5CQ9NQX4 1742 aa6.39□□□□□ -1.39
LINC00648-202ENST00000555985 CDC42BPBQ9Y5S2 1711 aa6.39□□□□□ -1.39
LINC00648-202ENST00000555985 UBTFP17480 764 aaKnown RBP6.39□□□□□ -1.39
LINC00648-202ENST00000555985 NEO1Q92859 1461 aa6.39□□□□□ -1.39
LINC00648-202ENST00000555985 CD109Q6YHK3 1445 aa6.39□□□□□ -1.39
LINC00648-202ENST00000555985 PREX2Q70Z35 1606 aa6.39□□□□□ -1.39
LINC00648-202ENST00000555985 CDC42BPAQ5VT25 1732 aa6.38□□□□□ -1.39
LINC00648-202ENST00000555985 TROQ12816 1431 aaPredicted RBP6.38□□□□□ -1.39
LINC00648-202ENST00000555985 TTBK1Q5TCY1 1321 aaPredicted RBP6.38□□□□□ -1.39
LINC00648-202ENST00000555985 MAP3K1Q13233 1512 aa6.37□□□□□ -1.39
LINC00648-202ENST00000555985 ZMYM4Q5VZL5 1548 aa6.37□□□□□ -1.39
LINC00648-202ENST00000555985 PHLDB1Q86UU1 1377 aa6.37□□□□□ -1.39
LINC00648-202ENST00000555985 PLCH2O75038 1416 aa6.36□□□□□ -1.39
LINC00648-202ENST00000555985 SIGLEC1Q9BZZ2 1709 aa6.35□□□□□ -1.39
LINC00648-202ENST00000555985 KDM5CP41229 1560 aa6.35□□□□□ -1.39
LINC00648-202ENST00000555985 TIAM1Q13009 1591 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms