RNA–Protein interactions for RNA: ENST00000555677.5

IFT43-211, Transcript of intraflagellar transport 43, humanhuman

TSL 4

Gene IFT43, Length 487 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-211ENST00000555677 JPH4Q96JJ6 628 aa25.74■■□□□ 1.71
IFT43-211ENST00000555677 PRG4Q92954 1404 aaPredicted RBP25.68■■□□□ 1.7
IFT43-211ENST00000555677 KIAA0586Q9BVV6 1533 aa25.66■■□□□ 1.7
IFT43-211ENST00000555677 TRHP20396 242 aaPredicted RBP25.57■■□□□ 1.68
IFT43-211ENST00000555677 RAPGEF2Q9Y4G8 1499 aa25.57■■□□□ 1.68
IFT43-211ENST00000555677 IQGAP2Q13576 1575 aa25.49■■□□□ 1.67
IFT43-211ENST00000555677 PRXQ9BXM0 1461 aa25.41■■□□□ 1.66
IFT43-211ENST00000555677 CTTNBP2Q8WZ74 1663 aa25.41■■□□□ 1.66
IFT43-211ENST00000555677 CARMIL2Q6F5E8 1435 aa25.37■■□□□ 1.65
IFT43-211ENST00000555677 CSRNP3Q8WYN3 585 aa25.36■■□□□ 1.65
IFT43-211ENST00000555677 ADCY10Q96PN6 1610 aa25.36■■□□□ 1.65
IFT43-211ENST00000555677 DISP1Q96F81 1524 aa25.34■■□□□ 1.65
IFT43-211ENST00000555677 UGGT2Q9NYU1 1516 aa25.34■■□□□ 1.65
IFT43-211ENST00000555677 PTPRGP23470 1445 aa25.33■■□□□ 1.65
IFT43-211ENST00000555677 TNIKQ9UKE5 1360 aa25.32■■□□□ 1.64
IFT43-211ENST00000555677 TTBK1Q5TCY1 1321 aaPredicted RBP25.32■■□□□ 1.64
IFT43-211ENST00000555677 CHIC1Q5VXU3 224 aa25.31■■□□□ 1.64
IFT43-211ENST00000555677 EEA1Q15075 1411 aa25.29■■□□□ 1.64
IFT43-211ENST00000555677 NPM1P06748 294 aaKnown RBP eCLIP25.28■■□□□ 1.64
IFT43-211ENST00000555677 KIF13AQ9H1H9 1805 aa25.26■■□□□ 1.63
IFT43-211ENST00000555677 KIAA0556O60303 1618 aa25.26■■□□□ 1.63
IFT43-211ENST00000555677 FAM9AQ8IZU1 332 aaPredicted RBP25.23■■□□□ 1.63
IFT43-211ENST00000555677 MAPKBP1O60336 1514 aa25.2■■□□□ 1.62
IFT43-211ENST00000555677 UACAQ9BZF9 1416 aa25.16■■□□□ 1.62
IFT43-211ENST00000555677 GOLGA3Q08378 1498 aa25.15■■□□□ 1.62
IFT43-211ENST00000555677 UHRF1BP1LA0JNW5 1464 aa25.15■■□□□ 1.62
IFT43-211ENST00000555677 ABCC2Q92887 1545 aa25.13■■□□□ 1.61
IFT43-211ENST00000555677 ABCC10Q5T3U5 1492 aa25.13■■□□□ 1.61
IFT43-211ENST00000555677 FAM69CQ0P6D2 419 aa25.1■■□□□ 1.61
IFT43-211ENST00000555677 DIP2BQ9P265 1576 aa25.09■■□□□ 1.61
IFT43-211ENST00000555677 KIF21BO75037 1637 aa25.08■■□□□ 1.61
IFT43-211ENST00000555677 KDM5BQ9UGL1 1544 aa25.04■■□□□ 1.6
IFT43-211ENST00000555677 P3H3Q8IVL6 736 aa25.04■■□□□ 1.6
IFT43-211ENST00000555677 PLB1Q6P1J6 1458 aa25.03■■□□□ 1.6
IFT43-211ENST00000555677 ZCCHC11Q5TAX3 1644 aaKnown RBP25.03■■□□□ 1.6
IFT43-211ENST00000555677 SAMD9Q5K651 1589 aa25.01■■□□□ 1.59
IFT43-211ENST00000555677 ASXL2Q76L83 1435 aa25.01■■□□□ 1.59
IFT43-211ENST00000555677 ABCA8O94911 1581 aa25.01■■□□□ 1.59
IFT43-211ENST00000555677 TSPOAP1O95153 1857 aa25■■□□□ 1.59
IFT43-211ENST00000555677 RANGAP1P46060 587 aaPredicted RBP24.97■■□□□ 1.59
IFT43-211ENST00000555677 EHMT2Q96KQ7 1210 aa24.95■■□□□ 1.58
IFT43-211ENST00000555677 GLI2P10070 1586 aa24.9■■□□□ 1.58
IFT43-211ENST00000555677 UBTFP17480 764 aaKnown RBP24.89■■□□□ 1.58
IFT43-211ENST00000555677 EPRSP07814 1512 aaKnown RBP24.86■■□□□ 1.57
IFT43-211ENST00000555677 PPRC1Q5VV67 1664 aaKnown RBP24.84■■□□□ 1.57
IFT43-211ENST00000555677 RAPGEF6Q8TEU7 1601 aa24.83■■□□□ 1.57
IFT43-211ENST00000555677 FHOD3Q2V2M9 1422 aa24.83■■□□□ 1.57
IFT43-211ENST00000555677 WDR7Q9Y4E6 1490 aa24.83■■□□□ 1.56
IFT43-211ENST00000555677 MAP3K4Q9Y6R4 1608 aa24.82■■□□□ 1.56
IFT43-211ENST00000555677 EFCAB5A4FU69 1503 aa24.81■■□□□ 1.56
IFT43-211ENST00000555677 ATP10BO94823 1461 aa24.81■■□□□ 1.56
IFT43-211ENST00000555677 ARID3CA6NKF2 412 aa24.8■■□□□ 1.56
IFT43-211ENST00000555677 KCNH8Q96L42 1107 aa24.77■■□□□ 1.56
IFT43-211ENST00000555677 KDM6BO15054 1643 aa24.75■■□□□ 1.55
IFT43-211ENST00000555677 NUP153P49790 1475 aaKnown RBP24.71■■□□□ 1.55
IFT43-211ENST00000555677 CFAP43Q8NDM7 1665 aa24.71■■□□□ 1.55
IFT43-211ENST00000555677 ARHGAP35Q9NRY4 1499 aa24.69■■□□□ 1.54
IFT43-211ENST00000555677 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.68■■□□□ 1.54
IFT43-211ENST00000555677 HNRNPUL2Q1KMD3 747 aaKnown RBP24.68■■□□□ 1.54
IFT43-211ENST00000555677 CD109Q6YHK3 1445 aa24.65■■□□□ 1.54
IFT43-211ENST00000555677 TEX14Q8IWB6 1497 aa24.64■■□□□ 1.54
IFT43-211ENST00000555677 MAGI3Q5TCQ9 1506 aa24.6■■□□□ 1.53
IFT43-211ENST00000555677 FMN1Q68DA7 1419 aa24.6■■□□□ 1.53
IFT43-211ENST00000555677 COL17A1Q9UMD9 1497 aaPredicted RBP24.59■■□□□ 1.53
IFT43-211ENST00000555677 ABCA9Q8IUA7 1624 aa24.59■■□□□ 1.53
IFT43-211ENST00000555677 PLEKHD1A6NEE1 506 aa24.56■■□□□ 1.52
IFT43-211ENST00000555677 ATP1B4Q9UN42 357 aaPredicted RBP24.54■■□□□ 1.52
IFT43-211ENST00000555677 CDK13Q14004 1512 aaKnown RBP24.53■■□□□ 1.52
IFT43-211ENST00000555677 HECW1Q76N89 1606 aa24.52■■□□□ 1.52
IFT43-211ENST00000555677 LRRIQ1Q96JM4 1722 aa24.51■■□□□ 1.51
IFT43-211ENST00000555677 AEBP2Q6ZN18 517 aaPredicted RBP24.44■■□□□ 1.5
IFT43-211ENST00000555677 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.44■■□□□ 1.5
IFT43-211ENST00000555677 CLIP1P30622 1438 aa24.44■■□□□ 1.5
IFT43-211ENST00000555677 ARAP3Q8WWN8 1544 aa24.41■■□□□ 1.5
IFT43-211ENST00000555677 PCF11O94913 1555 aaKnown RBP24.4■■□□□ 1.5
IFT43-211ENST00000555677 TTC37Q6PGP7 1564 aa24.39■■□□□ 1.5
IFT43-211ENST00000555677 PHLDB1Q86UU1 1377 aa24.39■■□□□ 1.49
IFT43-211ENST00000555677 CASKIN1Q8WXD9 1431 aa24.38■■□□□ 1.49
IFT43-211ENST00000555677 CDK11AQ9UQ88 783 aaPredicted RBP24.38■■□□□ 1.49
IFT43-211ENST00000555677 NEO1Q92859 1461 aa24.37■■□□□ 1.49
IFT43-211ENST00000555677 KDM4FA0A1W2PPD8 638 aa24.33■■□□□ 1.49
IFT43-211ENST00000555677 LOC105371045A0A1W2PR82 267 aa24.32■■□□□ 1.48
IFT43-211ENST00000555677 KIF14Q15058 1648 aa24.31■■□□□ 1.48
IFT43-211ENST00000555677 FYCO1Q9BQS8 1478 aa24.31■■□□□ 1.48
IFT43-211ENST00000555677 TROQ12816 1431 aaPredicted RBP24.3■■□□□ 1.48
IFT43-211ENST00000555677 RAPGEF3O95398 923 aa24.3■■□□□ 1.48
IFT43-211ENST00000555677 CCDC18Q5T9S5 1454 aa24.3■■□□□ 1.48
IFT43-211ENST00000555677 MYO5CQ9NQX4 1742 aa24.3■■□□□ 1.48
IFT43-211ENST00000555677 CFAP74Q9C0B2 1584 aa24.29■■□□□ 1.48
IFT43-211ENST00000555677 FANCAO15360 1455 aa24.29■■□□□ 1.48
IFT43-211ENST00000555677 PLCH2O75038 1416 aa24.27■■□□□ 1.48
IFT43-211ENST00000555677 CEP162Q5TB80 1403 aa24.27■■□□□ 1.48
IFT43-211ENST00000555677 AKNAQ7Z591 1439 aa24.27■■□□□ 1.48
IFT43-211ENST00000555677 FRMPD1Q5SYB0 1578 aa24.25■■□□□ 1.47
IFT43-211ENST00000555677 RICTORQ6R327 1708 aa24.24■■□□□ 1.47
IFT43-211ENST00000555677 DENND4BO75064 1496 aaPredicted RBP24.2■■□□□ 1.47
IFT43-211ENST00000555677 ADGRL1O94910 1474 aa24.2■■□□□ 1.47
IFT43-211ENST00000555677 CDC42BPBQ9Y5S2 1711 aa24.2■■□□□ 1.46
IFT43-211ENST00000555677 EFCAB2Q5VUJ9 269 aa24.17■■□□□ 1.46
IFT43-211ENST00000555677 SCAPERQ9BY12 1400 aa24.14■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms