RNA–Protein interactions for RNA: ENST00000555677.5

IFT43-211, Transcript of intraflagellar transport 43, humanhuman

TSL 4

Gene IFT43, Length 487 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-211ENST00000555677 NISCHQ9Y2I1 1504 aa37.03■■■■□ 3.52
IFT43-211ENST00000555677 CCDC180Q9P1Z9 1646 aa33.03■■■□□ 2.88
IFT43-211ENST00000555677 ABCC9O60706 1549 aa32.54■■■□□ 2.8
IFT43-211ENST00000555677 RB1CC1Q8TDY2 1594 aa31.19■■■□□ 2.58
IFT43-211ENST00000555677 NACADO15069 1562 aa31.09■■■□□ 2.57
IFT43-211ENST00000555677 DCAF8L2P0C7V8 631 aa31.08■■■□□ 2.57
IFT43-211ENST00000555677 MYO15BQ96JP2 1530 aa30.81■■■□□ 2.52
IFT43-211ENST00000555677 ZCCHC6Q5VYS8 1495 aaKnown RBP30.76■■■□□ 2.52
IFT43-211ENST00000555677 UNC13AQ9UPW8 1703 aa30.62■■■□□ 2.49
IFT43-211ENST00000555677 DCAF1Q9Y4B6 1507 aa30.6■■■□□ 2.49
IFT43-211ENST00000555677 PABPN1Q86U42 306 aaKnown RBP eCLIP30.39■■■□□ 2.46
IFT43-211ENST00000555677 BICRAQ9NZM4 1560 aa30.3■■■□□ 2.44
IFT43-211ENST00000555677 DNAJC5BQ9UF47 199 aa30.14■■■□□ 2.42
IFT43-211ENST00000555677 SCRIBQ14160 1630 aa30.13■■■□□ 2.41
IFT43-211ENST00000555677 SHROOM4Q9ULL8 1493 aa29.85■■■□□ 2.37
IFT43-211ENST00000555677 EIF4G1Q04637 1599 aaKnown RBP29.48■■■□□ 2.31
IFT43-211ENST00000555677 CC2D2AQ9P2K1 1620 aa29.45■■■□□ 2.31
IFT43-211ENST00000555677 CECR2Q9BXF3 1484 aa29.24■■■□□ 2.27
IFT43-211ENST00000555677 SMARCA4P51532 1647 aa28.8■■■□□ 2.2
IFT43-211ENST00000555677 BAZ1AQ9NRL2 1556 aaPredicted RBP28.7■■■□□ 2.18
IFT43-211ENST00000555677 NCAPD3P42695 1498 aa28.69■■■□□ 2.18
IFT43-211ENST00000555677 ATAD2BQ9ULI0 1458 aa28.67■■■□□ 2.18
IFT43-211ENST00000555677 SMARCA2P51531 1590 aa28.62■■■□□ 2.17
IFT43-211ENST00000555677 MROH2BQ7Z745 1585 aa28.55■■■□□ 2.16
IFT43-211ENST00000555677 HMGXB3Q12766 1538 aa28.51■■■□□ 2.15
IFT43-211ENST00000555677 PEG3Q9GZU2 1588 aa28.5■■■□□ 2.15
IFT43-211ENST00000555677 BAZ1BQ9UIG0 1483 aaKnown RBP28.41■■■□□ 2.14
IFT43-211ENST00000555677 WIZO95785 1651 aa28.28■■■□□ 2.12
IFT43-211ENST00000555677 RSF1Q96T23 1441 aaPredicted RBP28.12■■■□□ 2.09
IFT43-211ENST00000555677 NESP48681 1621 aa28.11■■■□□ 2.09
IFT43-211ENST00000555677 ERCC6Q03468 1493 aa28.03■■■□□ 2.08
IFT43-211ENST00000555677 LAMC3Q9Y6N6 1575 aa27.99■■■□□ 2.07
IFT43-211ENST00000555677 TOP2AP11388 1531 aaKnown RBP27.88■■■□□ 2.05
IFT43-211ENST00000555677 CADPSQ9ULU8 1353 aa27.84■■■□□ 2.05
IFT43-211ENST00000555677 KIF21AQ7Z4S6 1674 aa27.82■■■□□ 2.04
IFT43-211ENST00000555677 CUX2O14529 1486 aa27.82■■■□□ 2.04
IFT43-211ENST00000555677 PDS5BQ9NTI5 1447 aa27.77■■■□□ 2.04
IFT43-211ENST00000555677 THOC2Q8NI27 1593 aaKnown RBP27.72■■■□□ 2.03
IFT43-211ENST00000555677 CFTRP13569 1480 aa27.63■■■□□ 2.01
IFT43-211ENST00000555677 CCDC88BA6NC98 1476 aa27.59■■■□□ 2.01
IFT43-211ENST00000555677 FANCD2Q9BXW9 1451 aa27.52■■■□□ 2
IFT43-211ENST00000555677 MRC2Q9UBG0 1479 aa27.5■■□□□ 1.99
IFT43-211ENST00000555677 CEP164Q9UPV0 1460 aa27.5■■□□□ 1.99
IFT43-211ENST00000555677 PRDM2Q13029 1718 aa27.5■■□□□ 1.99
IFT43-211ENST00000555677 WDR62O43379 1518 aa27.43■■□□□ 1.98
IFT43-211ENST00000555677 DNAJC5Q9H3Z4 198 aa27.29■■□□□ 1.96
IFT43-211ENST00000555677 URB2Q14146 1524 aaKnown RBP27.28■■□□□ 1.96
IFT43-211ENST00000555677 SUPT5HO00267 1087 aaKnown RBP27.27■■□□□ 1.96
IFT43-211ENST00000555677 TOPBP1Q92547 1522 aa27.07■■□□□ 1.92
IFT43-211ENST00000555677 ABCC8Q09428 1581 aa27.04■■□□□ 1.92
IFT43-211ENST00000555677 DNMBPQ6XZF7 1577 aa27.01■■□□□ 1.91
IFT43-211ENST00000555677 IFT140Q96RY7 1462 aa26.93■■□□□ 1.9
IFT43-211ENST00000555677 ZNF608Q9ULD9 1512 aaPredicted RBP26.86■■□□□ 1.89
IFT43-211ENST00000555677 TARBP1Q13395 1621 aaKnown RBP26.83■■□□□ 1.88
IFT43-211ENST00000555677 POLA1P09884 1462 aaPredicted RBP26.81■■□□□ 1.88
IFT43-211ENST00000555677 CUX1P39880 1505 aa26.79■■□□□ 1.88
IFT43-211ENST00000555677 EIF4G3O43432 1585 aaKnown RBP26.75■■□□□ 1.87
IFT43-211ENST00000555677 RAD54L2Q9Y4B4 1467 aa26.73■■□□□ 1.87
IFT43-211ENST00000555677 FGD5Q6ZNL6 1462 aa26.72■■□□□ 1.87
IFT43-211ENST00000555677 SOGA1O94964 1423 aa26.72■■□□□ 1.87
IFT43-211ENST00000555677 AQRO60306 1485 aaKnown RBP eCLIP26.69■■□□□ 1.86
IFT43-211ENST00000555677 OSCARQ8IYS5 282 aa26.67■■□□□ 1.86
IFT43-211ENST00000555677 TDRD9Q8NDG6 1382 aaKnown RBP26.6■■□□□ 1.85
IFT43-211ENST00000555677 WDR97A6NE52 1622 aa26.56■■□□□ 1.84
IFT43-211ENST00000555677 BIVM-ERCC5R4GMW8 1640 aa26.52■■□□□ 1.84
IFT43-211ENST00000555677 CHD1O14646 1710 aa26.51■■□□□ 1.83
IFT43-211ENST00000555677 WRNQ14191 1432 aaPredicted RBP eCLIP26.5■■□□□ 1.83
IFT43-211ENST00000555677 TOP2BQ02880 1626 aa26.5■■□□□ 1.83
IFT43-211ENST00000555677 SYNJ1O43426 1573 aa26.49■■□□□ 1.83
IFT43-211ENST00000555677 ABCA10Q8WWZ4 1543 aa26.44■■□□□ 1.82
IFT43-211ENST00000555677 FBLN2P98095 1184 aa26.42■■□□□ 1.82
IFT43-211ENST00000555677 PBRM1Q86U86 1689 aa26.41■■□□□ 1.82
IFT43-211ENST00000555677 GRIN2BQ13224 1484 aa26.4■■□□□ 1.82
IFT43-211ENST00000555677 GAPVD1Q14C86 1478 aa26.4■■□□□ 1.82
IFT43-211ENST00000555677 SNAPC4Q5SXM2 1469 aa26.4■■□□□ 1.82
IFT43-211ENST00000555677 ABCA5Q8WWZ7 1642 aa26.38■■□□□ 1.81
IFT43-211ENST00000555677 MAGI1Q96QZ7 1491 aaPredicted RBP26.35■■□□□ 1.81
IFT43-211ENST00000555677 CHMP7Q8WUX9 453 aaPredicted RBP26.3■■□□□ 1.8
IFT43-211ENST00000555677 RIMBP3CA6NJZ7 1639 aa26.29■■□□□ 1.8
IFT43-211ENST00000555677 RIMBP3BA6NNM3 1639 aa26.29■■□□□ 1.8
IFT43-211ENST00000555677 RIMBP3Q9UFD9 1639 aa26.29■■□□□ 1.8
IFT43-211ENST00000555677 TRIM41Q8WV44 630 aa26.28■■□□□ 1.8
IFT43-211ENST00000555677 SYNJ2O15056 1496 aa26.26■■□□□ 1.79
IFT43-211ENST00000555677 ARHGEF11O15085 1522 aa26.21■■□□□ 1.79
IFT43-211ENST00000555677 CLASP1Q7Z460 1538 aa26.15■■□□□ 1.78
IFT43-211ENST00000555677 ERICH3Q5RHP9 1530 aa26.13■■□□□ 1.77
IFT43-211ENST00000555677 ADAMTS12P58397 1594 aa26.12■■□□□ 1.77
IFT43-211ENST00000555677 GRIN2AQ12879 1464 aa26.07■■□□□ 1.76
IFT43-211ENST00000555677 FHAD1B1AJZ9 1412 aa26.06■■□□□ 1.76
IFT43-211ENST00000555677 CYB5RLQ6IPT4 315 aa26.02■■□□□ 1.76
IFT43-211ENST00000555677 ARAP1Q96P48 1450 aa25.98■■□□□ 1.75
IFT43-211ENST00000555677 CEP170Q5SW79 1584 aa25.98■■□□□ 1.75
IFT43-211ENST00000555677 NUP160Q12769 1436 aa25.96■■□□□ 1.75
IFT43-211ENST00000555677 KIF27Q86VH2 1401 aa25.96■■□□□ 1.75
IFT43-211ENST00000555677 IGF1RP08069 1367 aa25.93■■□□□ 1.74
IFT43-211ENST00000555677 CUL7Q14999 1698 aa25.86■■□□□ 1.73
IFT43-211ENST00000555677 SHROOM2Q13796 1616 aa25.83■■□□□ 1.73
IFT43-211ENST00000555677 ERCC6L2Q5T890 1561 aa25.82■■□□□ 1.72
IFT43-211ENST00000555677 CARMIL1Q5VZK9 1371 aa25.75■■□□□ 1.71
IFT43-211ENST00000555677 RUSC2Q8N2Y8 1516 aa25.74■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms