RNA–Protein interactions for RNA: ENST00000555585.5

HNRNPC-220, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 682 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-220ENST00000555585 SCAF1Q9H7N4 1312 aaKnown RBP15.5■□□□□ 0.07
HNRNPC-220ENST00000555585 ADAMTS12P58397 1594 aa15.48■□□□□ 0.07
HNRNPC-220ENST00000555585 SNAPC4Q5SXM2 1469 aa15.46■□□□□ 0.07
HNRNPC-220ENST00000555585 FHAD1B1AJZ9 1412 aa15.46■□□□□ 0.07
HNRNPC-220ENST00000555585 MAPK8IP2Q13387 824 aaPredicted RBP15.45■□□□□ 0.06
HNRNPC-220ENST00000555585 MAGI1Q96QZ7 1491 aaPredicted RBP15.43■□□□□ 0.06
HNRNPC-220ENST00000555585 CEP162Q5TB80 1403 aa15.43■□□□□ 0.06
HNRNPC-220ENST00000555585 RANGAP1P46060 587 aaPredicted RBP15.4■□□□□ 0.06
HNRNPC-220ENST00000555585 CTTNBP2Q8WZ74 1663 aa15.4■□□□□ 0.06
HNRNPC-220ENST00000555585 DMRT2Q9Y5R5 561 aa15.38■□□□□ 0.05
HNRNPC-220ENST00000555585 FBLN2P98095 1184 aa15.37■□□□□ 0.05
HNRNPC-220ENST00000555585 CHMP7Q8WUX9 453 aaPredicted RBP15.37■□□□□ 0.05
HNRNPC-220ENST00000555585 SYNJ2O15056 1496 aa15.37■□□□□ 0.05
HNRNPC-220ENST00000555585 CLIP1P30622 1438 aa15.36■□□□□ 0.05
HNRNPC-220ENST00000555585 GRIN2AQ12879 1464 aa15.34■□□□□ 0.05
HNRNPC-220ENST00000555585 CHD1O14646 1710 aa15.3■□□□□ 0.04
HNRNPC-220ENST00000555585 IQGAP2Q13576 1575 aa15.26■□□□□ 0.03
HNRNPC-220ENST00000555585 CEP170Q5SW79 1584 aa15.26■□□□□ 0.03
HNRNPC-220ENST00000555585 ARHGAP35Q9NRY4 1499 aa15.25■□□□□ 0.03
HNRNPC-220ENST00000555585 KIAA0586Q9BVV6 1533 aa15.24■□□□□ 0.03
HNRNPC-220ENST00000555585 EFCAB5A4FU69 1503 aa15.22■□□□□ 0.03
HNRNPC-220ENST00000555585 ARAP1Q96P48 1450 aa15.22■□□□□ 0.03
HNRNPC-220ENST00000555585 NUP160Q12769 1436 aa15.22■□□□□ 0.03
HNRNPC-220ENST00000555585 P3H3Q8IVL6 736 aa15.21■□□□□ 0.03
HNRNPC-220ENST00000555585 VPS8Q8N3P4 1428 aa15.18■□□□□ 0.02
HNRNPC-220ENST00000555585 SAMD9Q5K651 1589 aa15.18■□□□□ 0.02
HNRNPC-220ENST00000555585 UGGT2Q9NYU1 1516 aa15.17■□□□□ 0.02
HNRNPC-220ENST00000555585 PPP4R3CPQ6ZMV5 832 aa15.17■□□□□ 0.02
HNRNPC-220ENST00000555585 FHOD3Q2V2M9 1422 aa15.16■□□□□ 0.02
HNRNPC-220ENST00000555585 JPH4Q96JJ6 628 aa15.13■□□□□ 0.01
HNRNPC-220ENST00000555585 KIAA0556O60303 1618 aa15.1■□□□□ 0.01
HNRNPC-220ENST00000555585 APLP2Q06481 763 aa15.1■□□□□ 0.01
HNRNPC-220ENST00000555585 DISP1Q96F81 1524 aa15.09■□□□□ 0.01
HNRNPC-220ENST00000555585 CARMIL2Q6F5E8 1435 aa15.09■□□□□ 0.01
HNRNPC-220ENST00000555585 CLASP1Q7Z460 1538 aa15.08■□□□□ 0.01
HNRNPC-220ENST00000555585 FMN1Q68DA7 1419 aa15.08■□□□□ 0
HNRNPC-220ENST00000555585 PPARGC1BQ86YN6 1023 aaKnown RBP15.07■□□□□ 0
HNRNPC-220ENST00000555585 ATP1B4Q9UN42 357 aaPredicted RBP15.07■□□□□ 0
HNRNPC-220ENST00000555585 TTBK1Q5TCY1 1321 aaPredicted RBP15.07■□□□□ 0
HNRNPC-220ENST00000555585 PCF11O94913 1555 aaKnown RBP15.06■□□□□ 0
HNRNPC-220ENST00000555585 SHROOM2Q13796 1616 aa15.06■□□□□ 0
HNRNPC-220ENST00000555585 PRG4Q92954 1404 aaPredicted RBP15.05■□□□□ -0
HNRNPC-220ENST00000555585 OSCARQ8IYS5 282 aa15.03■□□□□ -0
HNRNPC-220ENST00000555585 CASKIN1Q8WXD9 1431 aa15.02■□□□□ -0
HNRNPC-220ENST00000555585 FYCO1Q9BQS8 1478 aa15.01□□□□□ -0.01
HNRNPC-220ENST00000555585 HECW1Q76N89 1606 aa14.97□□□□□ -0.01
HNRNPC-220ENST00000555585 ERCC6L2Q5T890 1561 aa14.97□□□□□ -0.01
HNRNPC-220ENST00000555585 TIAM1Q13009 1591 aa14.96□□□□□ -0.01
HNRNPC-220ENST00000555585 CFAP43Q8NDM7 1665 aa14.96□□□□□ -0.01
HNRNPC-220ENST00000555585 RAPGEF6Q8TEU7 1601 aa14.95□□□□□ -0.02
HNRNPC-220ENST00000555585 LRRIQ1Q96JM4 1722 aa14.95□□□□□ -0.02
HNRNPC-220ENST00000555585 PTPRGP23470 1445 aa14.94□□□□□ -0.02
HNRNPC-220ENST00000555585 MAP3K1Q13233 1512 aa14.94□□□□□ -0.02
HNRNPC-220ENST00000555585 CCDC18Q5T9S5 1454 aa14.91□□□□□ -0.02
HNRNPC-220ENST00000555585 PLB1Q6P1J6 1458 aa14.91□□□□□ -0.02
HNRNPC-220ENST00000555585 KANK4Q5T7N3 995 aaPredicted RBP14.91□□□□□ -0.02
HNRNPC-220ENST00000555585 TRIM26Q12899 539 aaPredicted RBP14.9□□□□□ -0.02
HNRNPC-220ENST00000555585 CNKSR2Q8WXI2 1034 aa14.9□□□□□ -0.02
HNRNPC-220ENST00000555585 ABCA8O94911 1581 aa14.9□□□□□ -0.02
HNRNPC-220ENST00000555585 EPRSP07814 1512 aaKnown RBP14.89□□□□□ -0.03
HNRNPC-220ENST00000555585 ARID3CA6NKF2 412 aa14.89□□□□□ -0.03
HNRNPC-220ENST00000555585 NUP153P49790 1475 aaKnown RBP14.88□□□□□ -0.03
HNRNPC-220ENST00000555585 LRRC9Q6ZRR7 1453 aa14.88□□□□□ -0.03
HNRNPC-220ENST00000555585 CDK13Q14004 1512 aaKnown RBP14.87□□□□□ -0.03
HNRNPC-220ENST00000555585 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.87□□□□□ -0.03
HNRNPC-220ENST00000555585 HNRNPUL2Q1KMD3 747 aaKnown RBP14.87□□□□□ -0.03
HNRNPC-220ENST00000555585 PCGF6Q9BYE7 350 aa14.85□□□□□ -0.03
HNRNPC-220ENST00000555585 MTUS2Q5JR59 1369 aa14.85□□□□□ -0.03
HNRNPC-220ENST00000555585 UACAQ9BZF9 1416 aa14.84□□□□□ -0.03
HNRNPC-220ENST00000555585 HOXD11P31277 338 aaPredicted RBP14.82□□□□□ -0.04
HNRNPC-220ENST00000555585 EHBP1L1Q8N3D4 1523 aa14.82□□□□□ -0.04
HNRNPC-220ENST00000555585 CDK11AQ9UQ88 783 aaPredicted RBP14.81□□□□□ -0.04
HNRNPC-220ENST00000555585 ABCC2Q92887 1545 aa14.81□□□□□ -0.04
HNRNPC-220ENST00000555585 DCAF8L1A6NGE4 600 aa14.8□□□□□ -0.04
HNRNPC-220ENST00000555585 ATP10BO94823 1461 aa14.79□□□□□ -0.04
HNRNPC-220ENST00000555585 MAGI3Q5TCQ9 1506 aa14.79□□□□□ -0.04
HNRNPC-220ENST00000555585 SUPT6HQ7KZ85 1726 aaKnown RBP14.79□□□□□ -0.04
HNRNPC-220ENST00000555585 ARHGEF11O15085 1522 aa14.77□□□□□ -0.04
HNRNPC-220ENST00000555585 UHRF1BP1LA0JNW5 1464 aa14.77□□□□□ -0.04
HNRNPC-220ENST00000555585 RIMBP3CA6NJZ7 1639 aa14.74□□□□□ -0.05
HNRNPC-220ENST00000555585 RIMBP3BA6NNM3 1639 aa14.74□□□□□ -0.05
HNRNPC-220ENST00000555585 RIMBP3Q9UFD9 1639 aa14.74□□□□□ -0.05
HNRNPC-220ENST00000555585 PLEKHD1A6NEE1 506 aa14.74□□□□□ -0.05
HNRNPC-220ENST00000555585 RNF216Q9NWF9 866 aaPredicted RBP14.74□□□□□ -0.05
HNRNPC-220ENST00000555585 NCOA2Q15596 1464 aa14.74□□□□□ -0.05
HNRNPC-220ENST00000555585 ZCCHC11Q5TAX3 1644 aaKnown RBP14.74□□□□□ -0.05
HNRNPC-220ENST00000555585 ADCY10Q96PN6 1610 aa14.74□□□□□ -0.05
HNRNPC-220ENST00000555585 TROQ12816 1431 aaPredicted RBP14.73□□□□□ -0.05
HNRNPC-220ENST00000555585 PHLDB1Q86UU1 1377 aa14.73□□□□□ -0.05
HNRNPC-220ENST00000555585 KDM5BQ9UGL1 1544 aa14.7□□□□□ -0.06
HNRNPC-220ENST00000555585 RRBP1Q9P2E9 1410 aaKnown RBP14.69□□□□□ -0.06
HNRNPC-220ENST00000555585 KIF14Q15058 1648 aa14.68□□□□□ -0.06
HNRNPC-220ENST00000555585 NPM1P06748 294 aaKnown RBP eCLIP14.67□□□□□ -0.06
HNRNPC-220ENST00000555585 CCNB3Q8WWL7 1395 aa14.67□□□□□ -0.06
HNRNPC-220ENST00000555585 MYOM3Q5VTT5 1437 aa14.66□□□□□ -0.06
HNRNPC-220ENST00000555585 NCBP3Q53F19 620 aaKnown RBP14.66□□□□□ -0.06
HNRNPC-220ENST00000555585 CYB5RLQ6IPT4 315 aa14.66□□□□□ -0.06
HNRNPC-220ENST00000555585 FAM50AQ14320 339 aaKnown RBP14.65□□□□□ -0.06
HNRNPC-220ENST00000555585 FGD6Q6ZV73 1430 aa14.65□□□□□ -0.06
HNRNPC-220ENST00000555585 ITSN2Q9NZM3 1697 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 6 ms