RNA–Protein interactions for RNA: ENST00000555301.1

CHD8-208, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-208ENST00000555301 DNAJC5Q9H3Z4 198 aa23.36■■□□□ 1.33
CHD8-208ENST00000555301 JPH4Q96JJ6 628 aa23.32■■□□□ 1.32
CHD8-208ENST00000555301 UBTFP17480 764 aaKnown RBP23.31■■□□□ 1.32
CHD8-208ENST00000555301 EHMT2Q96KQ7 1210 aa23.31■■□□□ 1.32
CHD8-208ENST00000555301 IQGAP2Q13576 1575 aa23.28■■□□□ 1.32
CHD8-208ENST00000555301 SHROOM2Q13796 1616 aa23.23■■□□□ 1.31
CHD8-208ENST00000555301 CTTNBP2Q8WZ74 1663 aa23.22■■□□□ 1.31
CHD8-208ENST00000555301 PRG4Q92954 1404 aaPredicted RBP23.21■■□□□ 1.31
CHD8-208ENST00000555301 ARHGEF11O15085 1522 aa23.19■■□□□ 1.3
CHD8-208ENST00000555301 UGGT2Q9NYU1 1516 aa23.18■■□□□ 1.3
CHD8-208ENST00000555301 CARMIL2Q6F5E8 1435 aa23.16■■□□□ 1.3
CHD8-208ENST00000555301 TNIKQ9UKE5 1360 aa23.16■■□□□ 1.3
CHD8-208ENST00000555301 LOC105371045A0A1W2PR82 267 aa23.13■■□□□ 1.29
CHD8-208ENST00000555301 RIMBP3CA6NJZ7 1639 aa23.11■■□□□ 1.29
CHD8-208ENST00000555301 RIMBP3BA6NNM3 1639 aa23.11■■□□□ 1.29
CHD8-208ENST00000555301 RIMBP3Q9UFD9 1639 aa23.11■■□□□ 1.29
CHD8-208ENST00000555301 DISP1Q96F81 1524 aa23.1■■□□□ 1.29
CHD8-208ENST00000555301 ERCC6L2Q5T890 1561 aa23.1■■□□□ 1.29
CHD8-208ENST00000555301 RANGAP1P46060 587 aaPredicted RBP23.09■■□□□ 1.29
CHD8-208ENST00000555301 KIAA0556O60303 1618 aa23.04■■□□□ 1.28
CHD8-208ENST00000555301 ARAP1Q96P48 1450 aa23.03■■□□□ 1.28
CHD8-208ENST00000555301 EFCAB5A4FU69 1503 aa23.03■■□□□ 1.28
CHD8-208ENST00000555301 SAMD9Q5K651 1589 aa23.01■■□□□ 1.27
CHD8-208ENST00000555301 PTPRGP23470 1445 aa23■■□□□ 1.27
CHD8-208ENST00000555301 CYB5RLQ6IPT4 315 aa23■■□□□ 1.27
CHD8-208ENST00000555301 P3H3Q8IVL6 736 aa22.99■■□□□ 1.27
CHD8-208ENST00000555301 CLIP1P30622 1438 aa22.97■■□□□ 1.27
CHD8-208ENST00000555301 TTBK1Q5TCY1 1321 aaPredicted RBP22.95■■□□□ 1.26
CHD8-208ENST00000555301 ARHGAP35Q9NRY4 1499 aa22.95■■□□□ 1.26
CHD8-208ENST00000555301 CEP162Q5TB80 1403 aa22.94■■□□□ 1.26
CHD8-208ENST00000555301 FHOD3Q2V2M9 1422 aa22.93■■□□□ 1.26
CHD8-208ENST00000555301 UACAQ9BZF9 1416 aa22.86■■□□□ 1.25
CHD8-208ENST00000555301 FMN1Q68DA7 1419 aa22.84■■□□□ 1.25
CHD8-208ENST00000555301 UHRF1BP1LA0JNW5 1464 aa22.8■■□□□ 1.24
CHD8-208ENST00000555301 PLB1Q6P1J6 1458 aa22.8■■□□□ 1.24
CHD8-208ENST00000555301 ABCC2Q92887 1545 aa22.78■■□□□ 1.24
CHD8-208ENST00000555301 ABCA8O94911 1581 aa22.78■■□□□ 1.24
CHD8-208ENST00000555301 NPM1P06748 294 aaKnown RBP eCLIP22.77■■□□□ 1.24
CHD8-208ENST00000555301 ADCY10Q96PN6 1610 aa22.74■■□□□ 1.23
CHD8-208ENST00000555301 RAPGEF6Q8TEU7 1601 aa22.71■■□□□ 1.23
CHD8-208ENST00000555301 KDM5BQ9UGL1 1544 aa22.68■■□□□ 1.22
CHD8-208ENST00000555301 CASKIN1Q8WXD9 1431 aa22.68■■□□□ 1.22
CHD8-208ENST00000555301 ATP1B4Q9UN42 357 aaPredicted RBP22.67■■□□□ 1.22
CHD8-208ENST00000555301 NUP153P49790 1475 aaKnown RBP22.66■■□□□ 1.22
CHD8-208ENST00000555301 VPS8Q8N3P4 1428 aa22.65■■□□□ 1.22
CHD8-208ENST00000555301 FYCO1Q9BQS8 1478 aa22.64■■□□□ 1.21
CHD8-208ENST00000555301 HECW1Q76N89 1606 aa22.64■■□□□ 1.21
CHD8-208ENST00000555301 ATP10BO94823 1461 aa22.62■■□□□ 1.21
CHD8-208ENST00000555301 ARID3CA6NKF2 412 aa22.62■■□□□ 1.21
CHD8-208ENST00000555301 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.61■■□□□ 1.21
CHD8-208ENST00000555301 PCF11O94913 1555 aaKnown RBP22.61■■□□□ 1.21
CHD8-208ENST00000555301 HNRNPUL2Q1KMD3 747 aaKnown RBP22.61■■□□□ 1.21
CHD8-208ENST00000555301 MAPKBP1O60336 1514 aa22.58■■□□□ 1.21
CHD8-208ENST00000555301 EPRSP07814 1512 aaKnown RBP22.58■■□□□ 1.21
CHD8-208ENST00000555301 ZCCHC11Q5TAX3 1644 aaKnown RBP22.57■■□□□ 1.2
CHD8-208ENST00000555301 CCDC18Q5T9S5 1454 aa22.56■■□□□ 1.2
CHD8-208ENST00000555301 ASXL2Q76L83 1435 aa22.55■■□□□ 1.2
CHD8-208ENST00000555301 CDK11AQ9UQ88 783 aaPredicted RBP22.54■■□□□ 1.2
CHD8-208ENST00000555301 CDK13Q14004 1512 aaKnown RBP22.52■■□□□ 1.2
CHD8-208ENST00000555301 PLEKHD1A6NEE1 506 aa22.52■■□□□ 1.2
CHD8-208ENST00000555301 WDR7Q9Y4E6 1490 aa22.49■■□□□ 1.19
CHD8-208ENST00000555301 APLP2Q06481 763 aa22.46■■□□□ 1.19
CHD8-208ENST00000555301 ABCC10Q5T3U5 1492 aa22.44■■□□□ 1.18
CHD8-208ENST00000555301 TRHP20396 242 aaPredicted RBP22.42■■□□□ 1.18
CHD8-208ENST00000555301 KCNH8Q96L42 1107 aa22.42■■□□□ 1.18
CHD8-208ENST00000555301 MAP3K1Q13233 1512 aa22.41■■□□□ 1.18
CHD8-208ENST00000555301 LRRIQ1Q96JM4 1722 aa22.41■■□□□ 1.18
CHD8-208ENST00000555301 FAM69CQ0P6D2 419 aa22.41■■□□□ 1.18
CHD8-208ENST00000555301 TROQ12816 1431 aaPredicted RBP22.4■■□□□ 1.18
CHD8-208ENST00000555301 MTUS2Q5JR59 1369 aa22.38■■□□□ 1.17
CHD8-208ENST00000555301 TIAM1Q13009 1591 aa22.38■■□□□ 1.17
CHD8-208ENST00000555301 DIP2BQ9P265 1576 aa22.37■■□□□ 1.17
CHD8-208ENST00000555301 GLI2P10070 1586 aa22.35■■□□□ 1.17
CHD8-208ENST00000555301 CFAP43Q8NDM7 1665 aa22.33■■□□□ 1.17
CHD8-208ENST00000555301 MAGI3Q5TCQ9 1506 aa22.33■■□□□ 1.17
CHD8-208ENST00000555301 EHBP1L1Q8N3D4 1523 aa22.31■■□□□ 1.16
CHD8-208ENST00000555301 LRRC9Q6ZRR7 1453 aa22.31■■□□□ 1.16
CHD8-208ENST00000555301 KIF14Q15058 1648 aa22.28■■□□□ 1.16
CHD8-208ENST00000555301 KANK4Q5T7N3 995 aaPredicted RBP22.28■■□□□ 1.16
CHD8-208ENST00000555301 CD109Q6YHK3 1445 aa22.26■■□□□ 1.15
CHD8-208ENST00000555301 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.26■■□□□ 1.15
CHD8-208ENST00000555301 ABCA9Q8IUA7 1624 aa22.25■■□□□ 1.15
CHD8-208ENST00000555301 KIF13AQ9H1H9 1805 aa22.24■■□□□ 1.15
CHD8-208ENST00000555301 MAP3K4Q9Y6R4 1608 aa22.21■■□□□ 1.15
CHD8-208ENST00000555301 TTC37Q6PGP7 1564 aa22.2■■□□□ 1.14
CHD8-208ENST00000555301 NCOA2Q15596 1464 aa22.19■■□□□ 1.14
CHD8-208ENST00000555301 PLCH2O75038 1416 aa22.18■■□□□ 1.14
CHD8-208ENST00000555301 CCNB3Q8WWL7 1395 aa22.18■■□□□ 1.14
CHD8-208ENST00000555301 TEX14Q8IWB6 1497 aa22.17■■□□□ 1.14
CHD8-208ENST00000555301 SUPT6HQ7KZ85 1726 aaKnown RBP22.17■■□□□ 1.14
CHD8-208ENST00000555301 ARAP3Q8WWN8 1544 aa22.13■■□□□ 1.13
CHD8-208ENST00000555301 GPATCH8Q9UKJ3 1502 aaKnown RBP22.13■■□□□ 1.13
CHD8-208ENST00000555301 EFCAB2Q5VUJ9 269 aa22.13■■□□□ 1.13
CHD8-208ENST00000555301 PHLDB1Q86UU1 1377 aa22.11■■□□□ 1.13
CHD8-208ENST00000555301 CFDP1Q9UEE9 299 aaPredicted RBP22.1■■□□□ 1.13
CHD8-208ENST00000555301 FANCAO15360 1455 aa22.09■■□□□ 1.13
CHD8-208ENST00000555301 NEO1Q92859 1461 aa22.09■■□□□ 1.13
CHD8-208ENST00000555301 PPARGC1BQ86YN6 1023 aaKnown RBP22.09■■□□□ 1.13
CHD8-208ENST00000555301 ARHGAP5Q13017 1502 aa22.09■■□□□ 1.13
CHD8-208ENST00000555301 MYO5CQ9NQX4 1742 aa22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms