RNA–Protein interactions for RNA: ENST00000555295.1

PABPN1-205, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 3

Gene PABPN1, Length 406 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-205ENST00000555295 JPH4Q96JJ6 628 aa22.19■■□□□ 1.14
PABPN1-205ENST00000555295 IGF1RP08069 1367 aa22.18■■□□□ 1.14
PABPN1-205ENST00000555295 KIAA0586Q9BVV6 1533 aa22.11■■□□□ 1.13
PABPN1-205ENST00000555295 CARMIL1Q5VZK9 1371 aa22.09■■□□□ 1.13
PABPN1-205ENST00000555295 NPM1P06748 294 aaKnown RBP eCLIP22.02■■□□□ 1.12
PABPN1-205ENST00000555295 CARMIL2Q6F5E8 1435 aa21.96■■□□□ 1.11
PABPN1-205ENST00000555295 IQGAP2Q13576 1575 aa21.94■■□□□ 1.1
PABPN1-205ENST00000555295 RAPGEF2Q9Y4G8 1499 aa21.92■■□□□ 1.1
PABPN1-205ENST00000555295 PTPRGP23470 1445 aa21.89■■□□□ 1.1
PABPN1-205ENST00000555295 ADCY10Q96PN6 1610 aa21.89■■□□□ 1.09
PABPN1-205ENST00000555295 MAPKBP1O60336 1514 aa21.88■■□□□ 1.09
PABPN1-205ENST00000555295 TNIKQ9UKE5 1360 aa21.87■■□□□ 1.09
PABPN1-205ENST00000555295 TTBK1Q5TCY1 1321 aaPredicted RBP21.84■■□□□ 1.09
PABPN1-205ENST00000555295 KIF13AQ9H1H9 1805 aa21.83■■□□□ 1.09
PABPN1-205ENST00000555295 ABCC10Q5T3U5 1492 aa21.83■■□□□ 1.08
PABPN1-205ENST00000555295 FAM69CQ0P6D2 419 aa21.82■■□□□ 1.08
PABPN1-205ENST00000555295 UGGT2Q9NYU1 1516 aa21.78■■□□□ 1.08
PABPN1-205ENST00000555295 DIP2BQ9P265 1576 aa21.77■■□□□ 1.08
PABPN1-205ENST00000555295 ABCC2Q92887 1545 aa21.75■■□□□ 1.07
PABPN1-205ENST00000555295 DISP1Q96F81 1524 aa21.75■■□□□ 1.07
PABPN1-205ENST00000555295 CTTNBP2Q8WZ74 1663 aa21.72■■□□□ 1.07
PABPN1-205ENST00000555295 UACAQ9BZF9 1416 aa21.72■■□□□ 1.07
PABPN1-205ENST00000555295 UHRF1BP1LA0JNW5 1464 aa21.72■■□□□ 1.07
PABPN1-205ENST00000555295 KIAA0556O60303 1618 aa21.72■■□□□ 1.07
PABPN1-205ENST00000555295 GOLGA3Q08378 1498 aa21.7■■□□□ 1.06
PABPN1-205ENST00000555295 PRXQ9BXM0 1461 aa21.69■■□□□ 1.06
PABPN1-205ENST00000555295 AEBP2Q6ZN18 517 aaPredicted RBP21.68■■□□□ 1.06
PABPN1-205ENST00000555295 PLB1Q6P1J6 1458 aa21.68■■□□□ 1.06
PABPN1-205ENST00000555295 ASXL2Q76L83 1435 aa21.64■■□□□ 1.06
PABPN1-205ENST00000555295 FAM9AQ8IZU1 332 aaPredicted RBP21.64■■□□□ 1.05
PABPN1-205ENST00000555295 KDM5BQ9UGL1 1544 aa21.6■■□□□ 1.05
PABPN1-205ENST00000555295 EEA1Q15075 1411 aa21.6■■□□□ 1.05
PABPN1-205ENST00000555295 CSRNP3Q8WYN3 585 aa21.59■■□□□ 1.05
PABPN1-205ENST00000555295 KDM6BO15054 1643 aa21.58■■□□□ 1.05
PABPN1-205ENST00000555295 TSPOAP1O95153 1857 aa21.58■■□□□ 1.05
PABPN1-205ENST00000555295 GLI2P10070 1586 aa21.57■■□□□ 1.04
PABPN1-205ENST00000555295 ZCCHC11Q5TAX3 1644 aaKnown RBP21.55■■□□□ 1.04
PABPN1-205ENST00000555295 EPRSP07814 1512 aaKnown RBP21.51■■□□□ 1.03
PABPN1-205ENST00000555295 WDR7Q9Y4E6 1490 aa21.49■■□□□ 1.03
PABPN1-205ENST00000555295 ABCA8O94911 1581 aa21.48■■□□□ 1.03
PABPN1-205ENST00000555295 TEX14Q8IWB6 1497 aa21.47■■□□□ 1.03
PABPN1-205ENST00000555295 MAP3K4Q9Y6R4 1608 aa21.44■■□□□ 1.02
PABPN1-205ENST00000555295 PPRC1Q5VV67 1664 aaKnown RBP21.42■■□□□ 1.02
PABPN1-205ENST00000555295 P3H3Q8IVL6 736 aa21.42■■□□□ 1.02
PABPN1-205ENST00000555295 SAMD9Q5K651 1589 aa21.4■■□□□ 1.02
PABPN1-205ENST00000555295 KCNH8Q96L42 1107 aa21.36■■□□□ 1.01
PABPN1-205ENST00000555295 KIF21BO75037 1637 aa21.36■■□□□ 1.01
PABPN1-205ENST00000555295 RANGAP1P46060 587 aaPredicted RBP21.34■■□□□ 1.01
PABPN1-205ENST00000555295 CFAP43Q8NDM7 1665 aa21.34■■□□□ 1.01
PABPN1-205ENST00000555295 CD109Q6YHK3 1445 aa21.33■■□□□ 1.01
PABPN1-205ENST00000555295 ARID3CA6NKF2 412 aa21.32■■□□□ 1
PABPN1-205ENST00000555295 RAPGEF6Q8TEU7 1601 aa21.32■■□□□ 1
PABPN1-205ENST00000555295 MAGI3Q5TCQ9 1506 aa21.3■■□□□ 1
PABPN1-205ENST00000555295 EFCAB5A4FU69 1503 aa21.29■■□□□ 1
PABPN1-205ENST00000555295 ATP10BO94823 1461 aa21.29■■□□□ 1
PABPN1-205ENST00000555295 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.29■■□□□ 1
PABPN1-205ENST00000555295 HNRNPUL2Q1KMD3 747 aaKnown RBP21.29■■□□□ 1
PABPN1-205ENST00000555295 FHOD3Q2V2M9 1422 aa21.27■■□□□ 1
PABPN1-205ENST00000555295 CHIC1Q5VXU3 224 aa21.26■□□□□ 0.99
PABPN1-205ENST00000555295 COL17A1Q9UMD9 1497 aaPredicted RBP21.25■□□□□ 0.99
PABPN1-205ENST00000555295 UBTFP17480 764 aaKnown RBP21.23■□□□□ 0.99
PABPN1-205ENST00000555295 NUP153P49790 1475 aaKnown RBP21.2■□□□□ 0.98
PABPN1-205ENST00000555295 KDM4FA0A1W2PPD8 638 aa21.2■□□□□ 0.98
PABPN1-205ENST00000555295 ABCA9Q8IUA7 1624 aa21.18■□□□□ 0.98
PABPN1-205ENST00000555295 EHMT2Q96KQ7 1210 aa21.17■□□□□ 0.98
PABPN1-205ENST00000555295 PHLDB1Q86UU1 1377 aa21.17■□□□□ 0.98
PABPN1-205ENST00000555295 ADGRL1O94910 1474 aa21.15■□□□□ 0.98
PABPN1-205ENST00000555295 PLEKHD1A6NEE1 506 aa21.15■□□□□ 0.98
PABPN1-205ENST00000555295 ARAP3Q8WWN8 1544 aa21.13■□□□□ 0.97
PABPN1-205ENST00000555295 FMN1Q68DA7 1419 aa21.11■□□□□ 0.97
PABPN1-205ENST00000555295 NEO1Q92859 1461 aa21.1■□□□□ 0.97
PABPN1-205ENST00000555295 HECW1Q76N89 1606 aa21.05■□□□□ 0.96
PABPN1-205ENST00000555295 ATP1B4Q9UN42 357 aaPredicted RBP21.05■□□□□ 0.96
PABPN1-205ENST00000555295 ARHGAP35Q9NRY4 1499 aa21.03■□□□□ 0.96
PABPN1-205ENST00000555295 CFAP74Q9C0B2 1584 aa21.02■□□□□ 0.96
PABPN1-205ENST00000555295 CDK11AQ9UQ88 783 aaPredicted RBP21.02■□□□□ 0.96
PABPN1-205ENST00000555295 CDK13Q14004 1512 aaKnown RBP21.01■□□□□ 0.95
PABPN1-205ENST00000555295 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.99■□□□□ 0.95
PABPN1-205ENST00000555295 RAPGEF3O95398 923 aa20.98■□□□□ 0.95
PABPN1-205ENST00000555295 FANCAO15360 1455 aa20.98■□□□□ 0.95
PABPN1-205ENST00000555295 DENND4BO75064 1496 aaPredicted RBP20.95■□□□□ 0.94
PABPN1-205ENST00000555295 TTC37Q6PGP7 1564 aa20.95■□□□□ 0.94
PABPN1-205ENST00000555295 AKNAQ7Z591 1439 aa20.95■□□□□ 0.94
PABPN1-205ENST00000555295 CLIP1P30622 1438 aa20.92■□□□□ 0.94
PABPN1-205ENST00000555295 FRMPD1Q5SYB0 1578 aa20.91■□□□□ 0.94
PABPN1-205ENST00000555295 KIF14Q15058 1648 aa20.89■□□□□ 0.94
PABPN1-205ENST00000555295 PLCH2O75038 1416 aa20.88■□□□□ 0.93
PABPN1-205ENST00000555295 ARID4BQ4LE39 1312 aaPredicted RBP20.88■□□□□ 0.93
PABPN1-205ENST00000555295 TROQ12816 1431 aaPredicted RBP20.87■□□□□ 0.93
PABPN1-205ENST00000555295 ARHGEF40Q8TER5 1519 aa20.87■□□□□ 0.93
PABPN1-205ENST00000555295 CCDC18Q5T9S5 1454 aa20.87■□□□□ 0.93
PABPN1-205ENST00000555295 RICTORQ6R327 1708 aa20.86■□□□□ 0.93
PABPN1-205ENST00000555295 MYO5CQ9NQX4 1742 aa20.85■□□□□ 0.93
PABPN1-205ENST00000555295 EFCAB2Q5VUJ9 269 aa20.85■□□□□ 0.93
PABPN1-205ENST00000555295 CASKIN1Q8WXD9 1431 aa20.85■□□□□ 0.93
PABPN1-205ENST00000555295 ZMYM4Q5VZL5 1548 aa20.83■□□□□ 0.93
PABPN1-205ENST00000555295 PCF11O94913 1555 aaKnown RBP20.83■□□□□ 0.92
PABPN1-205ENST00000555295 MAGI2Q86UL8 1455 aa20.82■□□□□ 0.92
PABPN1-205ENST00000555295 ZFYVE16Q7Z3T8 1539 aa20.82■□□□□ 0.92
PABPN1-205ENST00000555295 SCAPERQ9BY12 1400 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms