RNA–Protein interactions for RNA: ENST00000555295.1

PABPN1-205, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 3

Gene PABPN1, Length 406 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-205ENST00000555295 NISCHQ9Y2I1 1504 aa31.76■■■□□ 2.68
PABPN1-205ENST00000555295 CCDC180Q9P1Z9 1646 aa28.47■■■□□ 2.15
PABPN1-205ENST00000555295 ABCC9O60706 1549 aa28.26■■■□□ 2.11
PABPN1-205ENST00000555295 RB1CC1Q8TDY2 1594 aa27.04■■□□□ 1.92
PABPN1-205ENST00000555295 NACADO15069 1562 aa26.88■■□□□ 1.89
PABPN1-205ENST00000555295 DCAF8L2P0C7V8 631 aa26.78■■□□□ 1.88
PABPN1-205ENST00000555295 MYO15BQ96JP2 1530 aa26.56■■□□□ 1.84
PABPN1-205ENST00000555295 ZCCHC6Q5VYS8 1495 aaKnown RBP26.36■■□□□ 1.81
PABPN1-205ENST00000555295 PABPN1Q86U42 306 aaKnown RBP eCLIP26.31■■□□□ 1.8
PABPN1-205ENST00000555295 UNC13AQ9UPW8 1703 aa26.29■■□□□ 1.8
PABPN1-205ENST00000555295 DCAF1Q9Y4B6 1507 aa26.28■■□□□ 1.8
PABPN1-205ENST00000555295 DNAJC5BQ9UF47 199 aa26.21■■□□□ 1.79
PABPN1-205ENST00000555295 BICRAQ9NZM4 1560 aa26.12■■□□□ 1.77
PABPN1-205ENST00000555295 SHROOM4Q9ULL8 1493 aa25.95■■□□□ 1.74
PABPN1-205ENST00000555295 SCRIBQ14160 1630 aa25.92■■□□□ 1.74
PABPN1-205ENST00000555295 EIF4G1Q04637 1599 aaKnown RBP25.53■■□□□ 1.68
PABPN1-205ENST00000555295 CC2D2AQ9P2K1 1620 aa25.53■■□□□ 1.68
PABPN1-205ENST00000555295 CECR2Q9BXF3 1484 aa25.46■■□□□ 1.67
PABPN1-205ENST00000555295 NCAPD3P42695 1498 aa24.77■■□□□ 1.56
PABPN1-205ENST00000555295 SMARCA4P51532 1647 aa24.75■■□□□ 1.55
PABPN1-205ENST00000555295 SMARCA2P51531 1590 aa24.73■■□□□ 1.55
PABPN1-205ENST00000555295 ATAD2BQ9ULI0 1458 aa24.71■■□□□ 1.55
PABPN1-205ENST00000555295 BAZ1AQ9NRL2 1556 aaPredicted RBP24.7■■□□□ 1.54
PABPN1-205ENST00000555295 HMGXB3Q12766 1538 aa24.64■■□□□ 1.53
PABPN1-205ENST00000555295 BAZ1BQ9UIG0 1483 aaKnown RBP24.55■■□□□ 1.52
PABPN1-205ENST00000555295 PEG3Q9GZU2 1588 aa24.5■■□□□ 1.51
PABPN1-205ENST00000555295 ERCC6Q03468 1493 aa24.47■■□□□ 1.51
PABPN1-205ENST00000555295 MROH2BQ7Z745 1585 aa24.44■■□□□ 1.5
PABPN1-205ENST00000555295 CUX2O14529 1486 aa24.34■■□□□ 1.49
PABPN1-205ENST00000555295 NESP48681 1621 aa24.28■■□□□ 1.48
PABPN1-205ENST00000555295 LAMC3Q9Y6N6 1575 aa24.23■■□□□ 1.47
PABPN1-205ENST00000555295 WIZO95785 1651 aa24.15■■□□□ 1.46
PABPN1-205ENST00000555295 PDS5BQ9NTI5 1447 aa24.11■■□□□ 1.45
PABPN1-205ENST00000555295 DNAJC5Q9H3Z4 198 aa24.05■■□□□ 1.44
PABPN1-205ENST00000555295 CADPSQ9ULU8 1353 aa24.04■■□□□ 1.44
PABPN1-205ENST00000555295 THOC2Q8NI27 1593 aaKnown RBP24.03■■□□□ 1.44
PABPN1-205ENST00000555295 RSF1Q96T23 1441 aaPredicted RBP24.01■■□□□ 1.43
PABPN1-205ENST00000555295 KIF21AQ7Z4S6 1674 aa23.99■■□□□ 1.43
PABPN1-205ENST00000555295 TOP2AP11388 1531 aaKnown RBP23.93■■□□□ 1.42
PABPN1-205ENST00000555295 MRC2Q9UBG0 1479 aa23.87■■□□□ 1.41
PABPN1-205ENST00000555295 CEP164Q9UPV0 1460 aa23.83■■□□□ 1.41
PABPN1-205ENST00000555295 CFTRP13569 1480 aa23.8■■□□□ 1.4
PABPN1-205ENST00000555295 FANCD2Q9BXW9 1451 aa23.78■■□□□ 1.4
PABPN1-205ENST00000555295 WDR62O43379 1518 aa23.78■■□□□ 1.4
PABPN1-205ENST00000555295 CCDC88BA6NC98 1476 aa23.61■■□□□ 1.37
PABPN1-205ENST00000555295 PRDM2Q13029 1718 aa23.59■■□□□ 1.37
PABPN1-205ENST00000555295 URB2Q14146 1524 aaKnown RBP23.52■■□□□ 1.36
PABPN1-205ENST00000555295 ABCC8Q09428 1581 aa23.38■■□□□ 1.33
PABPN1-205ENST00000555295 TOPBP1Q92547 1522 aa23.33■■□□□ 1.33
PABPN1-205ENST00000555295 IFT140Q96RY7 1462 aa23.33■■□□□ 1.33
PABPN1-205ENST00000555295 DNMBPQ6XZF7 1577 aa23.29■■□□□ 1.32
PABPN1-205ENST00000555295 OSCARQ8IYS5 282 aa23.25■■□□□ 1.31
PABPN1-205ENST00000555295 ZNF608Q9ULD9 1512 aaPredicted RBP23.19■■□□□ 1.3
PABPN1-205ENST00000555295 SUPT5HO00267 1087 aaKnown RBP23.13■■□□□ 1.29
PABPN1-205ENST00000555295 EIF4G3O43432 1585 aaKnown RBP23.13■■□□□ 1.29
PABPN1-205ENST00000555295 TRIM41Q8WV44 630 aa23.12■■□□□ 1.29
PABPN1-205ENST00000555295 POLA1P09884 1462 aaPredicted RBP23.1■■□□□ 1.29
PABPN1-205ENST00000555295 TARBP1Q13395 1621 aaKnown RBP23.08■■□□□ 1.28
PABPN1-205ENST00000555295 AQRO60306 1485 aaKnown RBP eCLIP23.03■■□□□ 1.285e-7■■■■□ 19.7
PABPN1-205ENST00000555295 SOGA1O94964 1423 aa23.02■■□□□ 1.28
PABPN1-205ENST00000555295 FGD5Q6ZNL6 1462 aa22.99■■□□□ 1.27
PABPN1-205ENST00000555295 RAD54L2Q9Y4B4 1467 aa22.98■■□□□ 1.27
PABPN1-205ENST00000555295 CUX1P39880 1505 aa22.97■■□□□ 1.27
PABPN1-205ENST00000555295 WDR97A6NE52 1622 aa22.97■■□□□ 1.27
PABPN1-205ENST00000555295 TDRD9Q8NDG6 1382 aaKnown RBP22.92■■□□□ 1.26
PABPN1-205ENST00000555295 FBLN2P98095 1184 aa22.92■■□□□ 1.26
PABPN1-205ENST00000555295 CHD1O14646 1710 aa22.9■■□□□ 1.26
PABPN1-205ENST00000555295 RIMBP3CA6NJZ7 1639 aa22.87■■□□□ 1.25
PABPN1-205ENST00000555295 RIMBP3BA6NNM3 1639 aa22.87■■□□□ 1.25
PABPN1-205ENST00000555295 RIMBP3Q9UFD9 1639 aa22.87■■□□□ 1.25
PABPN1-205ENST00000555295 ARHGEF11O15085 1522 aa22.84■■□□□ 1.25
PABPN1-205ENST00000555295 SNAPC4Q5SXM2 1469 aa22.84■■□□□ 1.25
PABPN1-205ENST00000555295 GRIN2BQ13224 1484 aa22.83■■□□□ 1.25
PABPN1-205ENST00000555295 MAGI1Q96QZ7 1491 aaPredicted RBP22.82■■□□□ 1.24
PABPN1-205ENST00000555295 CHMP7Q8WUX9 453 aaPredicted RBP22.78■■□□□ 1.24
PABPN1-205ENST00000555295 GAPVD1Q14C86 1478 aa22.75■■□□□ 1.23
PABPN1-205ENST00000555295 ABCA10Q8WWZ4 1543 aa22.75■■□□□ 1.23
PABPN1-205ENST00000555295 WRNQ14191 1432 aaPredicted RBP eCLIP22.74■■□□□ 1.23
PABPN1-205ENST00000555295 SYNJ1O43426 1573 aa22.73■■□□□ 1.23
PABPN1-205ENST00000555295 SYNJ2O15056 1496 aa22.73■■□□□ 1.23
PABPN1-205ENST00000555295 PBRM1Q86U86 1689 aa22.71■■□□□ 1.23
PABPN1-205ENST00000555295 TOP2BQ02880 1626 aa22.68■■□□□ 1.22
PABPN1-205ENST00000555295 ABCA5Q8WWZ7 1642 aa22.68■■□□□ 1.22
PABPN1-205ENST00000555295 BIVM-ERCC5R4GMW8 1640 aa22.68■■□□□ 1.22
PABPN1-205ENST00000555295 CYB5RLQ6IPT4 315 aa22.67■■□□□ 1.22
PABPN1-205ENST00000555295 CLASP1Q7Z460 1538 aa22.64■■□□□ 1.21
PABPN1-205ENST00000555295 ARAP1Q96P48 1450 aa22.6■■□□□ 1.21
PABPN1-205ENST00000555295 ADAMTS12P58397 1594 aa22.52■■□□□ 1.2
PABPN1-205ENST00000555295 GRIN2AQ12879 1464 aa22.52■■□□□ 1.2
PABPN1-205ENST00000555295 ERICH3Q5RHP9 1530 aa22.49■■□□□ 1.19
PABPN1-205ENST00000555295 FHAD1B1AJZ9 1412 aa22.48■■□□□ 1.19
PABPN1-205ENST00000555295 TRHP20396 242 aaPredicted RBP22.42■■□□□ 1.18
PABPN1-205ENST00000555295 NUP160Q12769 1436 aa22.41■■□□□ 1.18
PABPN1-205ENST00000555295 CEP170Q5SW79 1584 aa22.38■■□□□ 1.17
PABPN1-205ENST00000555295 KIF27Q86VH2 1401 aa22.31■■□□□ 1.16
PABPN1-205ENST00000555295 SHROOM2Q13796 1616 aa22.28■■□□□ 1.16
PABPN1-205ENST00000555295 ERCC6L2Q5T890 1561 aa22.24■■□□□ 1.15
PABPN1-205ENST00000555295 CUL7Q14999 1698 aa22.22■■□□□ 1.15
PABPN1-205ENST00000555295 PRG4Q92954 1404 aaPredicted RBP22.2■■□□□ 1.14
PABPN1-205ENST00000555295 RUSC2Q8N2Y8 1516 aa22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms