RNA–Protein interactions for RNA: ENST00000555235.1

MARK3-209, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 2

Gene MARK3, Length 2,282 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-209ENST00000555235 CADPSQ9ULU8 1353 aa22.88■■□□□ 1.25
MARK3-209ENST00000555235 MAPKBP1O60336 1514 aa22.88■■□□□ 1.25
MARK3-209ENST00000555235 LRRC9Q6ZRR7 1453 aa22.86■■□□□ 1.25
MARK3-209ENST00000555235 FGD5Q6ZNL6 1462 aa22.85■■□□□ 1.25
MARK3-209ENST00000555235 SETD5Q9C0A6 1442 aa22.83■■□□□ 1.24
MARK3-209ENST00000555235 PHLDB1Q86UU1 1377 aa22.8■■□□□ 1.24
MARK3-209ENST00000555235 FHAD1B1AJZ9 1412 aa22.79■■□□□ 1.24
MARK3-209ENST00000555235 NESP48681 1621 aa22.76■■□□□ 1.23
MARK3-209ENST00000555235 CFAP43Q8NDM7 1665 aa22.76■■□□□ 1.23
MARK3-209ENST00000555235 KCNH8Q96L42 1107 aa22.74■■□□□ 1.23
MARK3-209ENST00000555235 PCF11O94913 1555 aaKnown RBP22.72■■□□□ 1.23
MARK3-209ENST00000555235 FKBP8Q14318 412 aa22.72■■□□□ 1.23
MARK3-209ENST00000555235 BCANQ96GW7 911 aa22.69■■□□□ 1.22
MARK3-209ENST00000555235 BCL11AQ9H165 835 aa22.68■■□□□ 1.22
MARK3-209ENST00000555235 NEFLP07196 543 aa22.68■■□□□ 1.22
MARK3-209ENST00000555235 FAM50AQ14320 339 aaKnown RBP22.66■■□□□ 1.22
MARK3-209ENST00000555235 WDR97A6NE52 1622 aa22.65■■□□□ 1.22
MARK3-209ENST00000555235 FANCD2Q9BXW9 1451 aa22.65■■□□□ 1.22
MARK3-209ENST00000555235 LAMC3Q9Y6N6 1575 aa22.64■■□□□ 1.21
MARK3-209ENST00000555235 SIN3AQ96ST3 1273 aa22.64■■□□□ 1.21
MARK3-209ENST00000555235 FYCO1Q9BQS8 1478 aa22.63■■□□□ 1.21
MARK3-209ENST00000555235 P3H3Q8IVL6 736 aa22.63■■□□□ 1.21
MARK3-209ENST00000555235 TIMELESSQ9UNS1 1208 aa22.63■■□□□ 1.21
MARK3-209ENST00000555235 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.63■■□□□ 1.21
MARK3-209ENST00000555235 EFCAB5A4FU69 1503 aa22.62■■□□□ 1.21
MARK3-209ENST00000555235 ABCA10Q8WWZ4 1543 aa22.62■■□□□ 1.21
MARK3-209ENST00000555235 AQRO60306 1485 aaKnown RBP eCLIP22.62■■□□□ 1.21
MARK3-209ENST00000555235 FHOD3Q2V2M9 1422 aa22.62■■□□□ 1.21
MARK3-209ENST00000555235 DNMBPQ6XZF7 1577 aa22.61■■□□□ 1.21
MARK3-209ENST00000555235 CASKIN1Q8WXD9 1431 aa22.61■■□□□ 1.21
MARK3-209ENST00000555235 DDX10Q13206 875 aaKnown RBP22.61■■□□□ 1.21
MARK3-209ENST00000555235 CCER2I3L3R5 266 aa22.6■■□□□ 1.21
MARK3-209ENST00000555235 RBM19Q9Y4C8 960 aaKnown RBP22.6■■□□□ 1.21
MARK3-209ENST00000555235 RAD54L2Q9Y4B4 1467 aa22.59■■□□□ 1.21
MARK3-209ENST00000555235 PPP1R15AO75807 674 aaPredicted RBP22.58■■□□□ 1.21
MARK3-209ENST00000555235 PDS5BQ9NTI5 1447 aa22.56■■□□□ 1.2
MARK3-209ENST00000555235 ATP1B4Q9UN42 357 aaPredicted RBP22.55■■□□□ 1.2
MARK3-209ENST00000555235 POLA1P09884 1462 aaPredicted RBP22.55■■□□□ 1.2
MARK3-209ENST00000555235 TOPBP1Q92547 1522 aa22.54■■□□□ 1.2
MARK3-209ENST00000555235 CUL7Q14999 1698 aa22.54■■□□□ 1.2
MARK3-209ENST00000555235 CTTNBP2Q8WZ74 1663 aa22.51■■□□□ 1.19
MARK3-209ENST00000555235 ANP32CO43423 234 aa22.5■■□□□ 1.19
MARK3-209ENST00000555235 ERCC6Q03468 1493 aa22.49■■□□□ 1.19
MARK3-209ENST00000555235 FMN1Q68DA7 1419 aa22.47■■□□□ 1.19
MARK3-209ENST00000555235 FGD6Q6ZV73 1430 aa22.47■■□□□ 1.19
MARK3-209ENST00000555235 SNAPC4Q5SXM2 1469 aa22.46■■□□□ 1.19
MARK3-209ENST00000555235 TRIM52Q96A61 297 aa22.43■■□□□ 1.18
MARK3-209ENST00000555235 CCDC18Q5T9S5 1454 aa22.4■■□□□ 1.18
MARK3-209ENST00000555235 HFM1A2PYH4 1435 aa22.39■■□□□ 1.17
MARK3-209ENST00000555235 PTPRKQ15262 1439 aa22.38■■□□□ 1.17
MARK3-209ENST00000555235 SAMD9Q5K651 1589 aa22.38■■□□□ 1.17
MARK3-209ENST00000555235 KIF21AQ7Z4S6 1674 aa22.38■■□□□ 1.17
MARK3-209ENST00000555235 UACAQ9BZF9 1416 aa22.37■■□□□ 1.17
MARK3-209ENST00000555235 MTUS2Q5JR59 1369 aa22.37■■□□□ 1.17
MARK3-209ENST00000555235 HIRIP3Q9BW71 556 aaPredicted RBP22.36■■□□□ 1.17
MARK3-209ENST00000555235 PTPN23Q9H3S7 1636 aa22.36■■□□□ 1.17
MARK3-209ENST00000555235 FANCIQ9NVI1 1328 aa22.35■■□□□ 1.17
MARK3-209ENST00000555235 TONSLQ96HA7 1378 aa22.35■■□□□ 1.17
MARK3-209ENST00000555235 GRIN2BQ13224 1484 aa22.33■■□□□ 1.16
MARK3-209ENST00000555235 LRRIQ1Q96JM4 1722 aa22.33■■□□□ 1.16
MARK3-209ENST00000555235 URB2Q14146 1524 aaKnown RBP22.33■■□□□ 1.16
MARK3-209ENST00000555235 MYOM3Q5VTT5 1437 aa22.31■■□□□ 1.16
MARK3-209ENST00000555235 NCOA2Q15596 1464 aa22.31■■□□□ 1.16
MARK3-209ENST00000555235 ABCA5Q8WWZ7 1642 aa22.31■■□□□ 1.16
MARK3-209ENST00000555235 NAIPQ13075 1403 aa22.31■■□□□ 1.16
MARK3-209ENST00000555235 THOC2Q8NI27 1593 aaKnown RBP22.3■■□□□ 1.16
MARK3-209ENST00000555235 MSH5O43196 834 aa22.29■■□□□ 1.16
MARK3-209ENST00000555235 CDK11AQ9UQ88 783 aaPredicted RBP22.27■■□□□ 1.16
MARK3-209ENST00000555235 MRC2Q9UBG0 1479 aa22.27■■□□□ 1.15
MARK3-209ENST00000555235 TDRD9Q8NDG6 1382 aaKnown RBP22.26■■□□□ 1.15
MARK3-209ENST00000555235 SUPT6HQ7KZ85 1726 aaKnown RBP22.26■■□□□ 1.15
MARK3-209ENST00000555235 EHBP1L1Q8N3D4 1523 aa22.26■■□□□ 1.15
MARK3-209ENST00000555235 GAPVD1Q14C86 1478 aa22.25■■□□□ 1.15
MARK3-209ENST00000555235 KDM5BQ9UGL1 1544 aa22.24■■□□□ 1.15
MARK3-209ENST00000555235 ERICH6BQ5W0A0 696 aa22.23■■□□□ 1.15
MARK3-209ENST00000555235 ARHGEF11O15085 1522 aa22.23■■□□□ 1.15
MARK3-209ENST00000555235 UGGT2Q9NYU1 1516 aa22.22■■□□□ 1.15
MARK3-209ENST00000555235 ERICH6Q7L0X2 663 aa22.21■■□□□ 1.15
MARK3-209ENST00000555235 MYT1LQ9UL68 1186 aa22.18■■□□□ 1.14
MARK3-209ENST00000555235 HNRNPUQ00839 825 aaKnown RBP eCLIP22.18■■□□□ 1.14
MARK3-209ENST00000555235 MAGI3Q5TCQ9 1506 aa22.17■■□□□ 1.14
MARK3-209ENST00000555235 TCOF1Q13428 1488 aaKnown RBP22.16■■□□□ 1.14
MARK3-209ENST00000555235 WDR62O43379 1518 aa22.14■■□□□ 1.13
MARK3-209ENST00000555235 GCC2Q8IWJ2 1684 aa22.12■■□□□ 1.13
MARK3-209ENST00000555235 DENND4BO75064 1496 aaPredicted RBP22.11■■□□□ 1.13
MARK3-209ENST00000555235 AKNAQ7Z591 1439 aa22.1■■□□□ 1.13
MARK3-209ENST00000555235 HECW1Q76N89 1606 aa22.1■■□□□ 1.13
MARK3-209ENST00000555235 RRP7BPQ9NSQ0 103 aa22.08■■□□□ 1.13
MARK3-209ENST00000555235 PPP4R2Q9NY27 417 aa22.08■■□□□ 1.13
MARK3-209ENST00000555235 TARBP1Q13395 1621 aaKnown RBP22.07■■□□□ 1.12
MARK3-209ENST00000555235 HSPA5P11021 654 aaKnown RBP22.05■■□□□ 1.12
MARK3-209ENST00000555235 IRX6P78412 446 aaPredicted RBP22.05■■□□□ 1.12
MARK3-209ENST00000555235 CHIC2Q9UKJ5 165 aa22.04■■□□□ 1.12
MARK3-209ENST00000555235 WASHC2AQ641Q2 1341 aa22.04■■□□□ 1.12
MARK3-209ENST00000555235 KDM6BO15054 1643 aa22.03■■□□□ 1.12
MARK3-209ENST00000555235 MIA2Q96PC5 1412 aa22.03■■□□□ 1.12
MARK3-209ENST00000555235 EPRSP07814 1512 aaKnown RBP22.03■■□□□ 1.12
MARK3-209ENST00000555235 IQGAP2Q13576 1575 aa21.99■■□□□ 1.11
MARK3-209ENST00000555235 MPHOSPH9Q99550 1183 aa21.98■■□□□ 1.11
MARK3-209ENST00000555235 PBRM1Q86U86 1689 aa21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms