RNA–Protein interactions for RNA: ENST00000554639.5

MEG3-224, Transcript of maternally expressed 3, humanhuman

TSL 1 (best)

Gene MEG3, Length 1,712 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MEG3-224ENST00000554639 AQRO60306 1485 aaKnown RBP eCLIP27.08■■□□□ 1.93
MEG3-224ENST00000554639 TIAM1Q13009 1591 aa27.08■■□□□ 1.92
MEG3-224ENST00000554639 WDR62O43379 1518 aa27.07■■□□□ 1.92
MEG3-224ENST00000554639 RRBP1Q9P2E9 1410 aaKnown RBP27.06■■□□□ 1.92
MEG3-224ENST00000554639 PBRM1Q86U86 1689 aa27.03■■□□□ 1.92
MEG3-224ENST00000554639 IFT140Q96RY7 1462 aa27.03■■□□□ 1.92
MEG3-224ENST00000554639 KANK4Q5T7N3 995 aaPredicted RBP27.02■■□□□ 1.92
MEG3-224ENST00000554639 FYCO1Q9BQS8 1478 aa27.01■■□□□ 1.91
MEG3-224ENST00000554639 CFAP43Q8NDM7 1665 aa27.01■■□□□ 1.91
MEG3-224ENST00000554639 SAMD9Q5K651 1589 aa26.98■■□□□ 1.91
MEG3-224ENST00000554639 FMN1Q68DA7 1419 aa26.98■■□□□ 1.91
MEG3-224ENST00000554639 CASKIN1Q8WXD9 1431 aa26.97■■□□□ 1.91
MEG3-224ENST00000554639 PELP1Q8IZL8 1130 aaKnown RBP26.96■■□□□ 1.91
MEG3-224ENST00000554639 GRIN2BQ13224 1484 aa26.96■■□□□ 1.91
MEG3-224ENST00000554639 PCF11O94913 1555 aaKnown RBP26.96■■□□□ 1.91
MEG3-224ENST00000554639 LRRC9Q6ZRR7 1453 aa26.94■■□□□ 1.9
MEG3-224ENST00000554639 ADAMTS12P58397 1594 aa26.93■■□□□ 1.9
MEG3-224ENST00000554639 HNRNPUL2Q1KMD3 747 aaKnown RBP26.91■■□□□ 1.9
MEG3-224ENST00000554639 FHOD3Q2V2M9 1422 aa26.9■■□□□ 1.9
MEG3-224ENST00000554639 CCNB3Q8WWL7 1395 aa26.89■■□□□ 1.89
MEG3-224ENST00000554639 THOC2Q8NI27 1593 aaKnown RBP26.85■■□□□ 1.89
MEG3-224ENST00000554639 ERCC6Q03468 1493 aa26.83■■□□□ 1.89
MEG3-224ENST00000554639 CLSPNQ9HAW4 1339 aa26.81■■□□□ 1.88
MEG3-224ENST00000554639 SNAPC4Q5SXM2 1469 aa26.81■■□□□ 1.88
MEG3-224ENST00000554639 IQGAP2Q13576 1575 aa26.78■■□□□ 1.88
MEG3-224ENST00000554639 P3H3Q8IVL6 736 aa26.77■■□□□ 1.88
MEG3-224ENST00000554639 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.72■■□□□ 1.87
MEG3-224ENST00000554639 ZNF608Q9ULD9 1512 aaPredicted RBP26.72■■□□□ 1.87
MEG3-224ENST00000554639 EIF4G3O43432 1585 aaKnown RBP26.71■■□□□ 1.87
MEG3-224ENST00000554639 UGGT2Q9NYU1 1516 aa26.7■■□□□ 1.87
MEG3-224ENST00000554639 MAGI1Q96QZ7 1491 aaPredicted RBP26.67■■□□□ 1.86
MEG3-224ENST00000554639 CCDC18Q5T9S5 1454 aa26.66■■□□□ 1.86
MEG3-224ENST00000554639 PHLDB1Q86UU1 1377 aa26.65■■□□□ 1.86
MEG3-224ENST00000554639 KIAA0586Q9BVV6 1533 aa26.65■■□□□ 1.86
MEG3-224ENST00000554639 GRIN2AQ12879 1464 aa26.61■■□□□ 1.85
MEG3-224ENST00000554639 HECW1Q76N89 1606 aa26.6■■□□□ 1.85
MEG3-224ENST00000554639 ATP1B4Q9UN42 357 aaPredicted RBP26.6■■□□□ 1.85
MEG3-224ENST00000554639 DHX57Q6P158 1386 aaKnown RBP26.59■■□□□ 1.85
MEG3-224ENST00000554639 EHBP1L1Q8N3D4 1523 aa26.59■■□□□ 1.85
MEG3-224ENST00000554639 LRRIQ1Q96JM4 1722 aa26.58■■□□□ 1.85
MEG3-224ENST00000554639 MTUS2Q5JR59 1369 aa26.57■■□□□ 1.84
MEG3-224ENST00000554639 SYNJ2O15056 1496 aa26.55■■□□□ 1.84
MEG3-224ENST00000554639 SUPT6HQ7KZ85 1726 aaKnown RBP26.53■■□□□ 1.84
MEG3-224ENST00000554639 FGD6Q6ZV73 1430 aa26.49■■□□□ 1.83
MEG3-224ENST00000554639 SETD5Q9C0A6 1442 aa26.49■■□□□ 1.83
MEG3-224ENST00000554639 KIAA0556O60303 1618 aa26.49■■□□□ 1.83
MEG3-224ENST00000554639 ARHGEF11O15085 1522 aa26.47■■□□□ 1.83
MEG3-224ENST00000554639 NCOA2Q15596 1464 aa26.45■■□□□ 1.82
MEG3-224ENST00000554639 DISP1Q96F81 1524 aa26.44■■□□□ 1.82
MEG3-224ENST00000554639 EPRSP07814 1512 aaKnown RBP26.44■■□□□ 1.82
MEG3-224ENST00000554639 RAB3GAP2Q9H2M9 1393 aa26.43■■□□□ 1.82
MEG3-224ENST00000554639 MYOM3Q5VTT5 1437 aa26.43■■□□□ 1.82
MEG3-224ENST00000554639 FAM50AQ14320 339 aaKnown RBP26.42■■□□□ 1.82
MEG3-224ENST00000554639 NUP160Q12769 1436 aa26.41■■□□□ 1.82
MEG3-224ENST00000554639 ZNF316A6NFI3 1004 aaPredicted RBP26.4■■□□□ 1.82
MEG3-224ENST00000554639 CHMP7Q8WUX9 453 aaPredicted RBP26.39■■□□□ 1.81
MEG3-224ENST00000554639 CEP170Q5SW79 1584 aa26.38■■□□□ 1.81
MEG3-224ENST00000554639 ITGAEP38570 1179 aa26.37■■□□□ 1.81
MEG3-224ENST00000554639 MAGI3Q5TCQ9 1506 aa26.34■■□□□ 1.81
MEG3-224ENST00000554639 RAPGEF6Q8TEU7 1601 aa26.33■■□□□ 1.81
MEG3-224ENST00000554639 TCOF1Q13428 1488 aaKnown RBP26.32■■□□□ 1.8
MEG3-224ENST00000554639 CARMIL2Q6F5E8 1435 aa26.31■■□□□ 1.8
MEG3-224ENST00000554639 MIA2Q96PC5 1412 aa26.3■■□□□ 1.8
MEG3-224ENST00000554639 PTPN23Q9H3S7 1636 aa26.29■■□□□ 1.8
MEG3-224ENST00000554639 DIEXFQ68CQ4 756 aaKnown RBP26.29■■□□□ 1.8
MEG3-224ENST00000554639 HFM1A2PYH4 1435 aa26.25■■□□□ 1.79
MEG3-224ENST00000554639 MAPKBP1O60336 1514 aa26.24■■□□□ 1.79
MEG3-224ENST00000554639 CDK13Q14004 1512 aaKnown RBP26.24■■□□□ 1.79
MEG3-224ENST00000554639 NUP153P49790 1475 aaKnown RBP26.24■■□□□ 1.79
MEG3-224ENST00000554639 CDK11AQ9UQ88 783 aaPredicted RBP26.22■■□□□ 1.79
MEG3-224ENST00000554639 AKNAQ7Z591 1439 aa26.2■■□□□ 1.78
MEG3-224ENST00000554639 TIMELESSQ9UNS1 1208 aa26.19■■□□□ 1.78
MEG3-224ENST00000554639 JPH4Q96JJ6 628 aa26.18■■□□□ 1.78
MEG3-224ENST00000554639 ACIN1Q9UKV3 1341 aaKnown RBP26.15■■□□□ 1.78
MEG3-224ENST00000554639 FBLN2P98095 1184 aa26.14■■□□□ 1.78
MEG3-224ENST00000554639 PTPRKQ15262 1439 aa26.14■■□□□ 1.77
MEG3-224ENST00000554639 NAIPQ13075 1403 aa26.12■■□□□ 1.77
MEG3-224ENST00000554639 UACAQ9BZF9 1416 aa26.11■■□□□ 1.77
MEG3-224ENST00000554639 ADCY10Q96PN6 1610 aa26.1■■□□□ 1.77
MEG3-224ENST00000554639 TROQ12816 1431 aaPredicted RBP26.1■■□□□ 1.77
MEG3-224ENST00000554639 MYT1Q01538 1121 aa26.1■■□□□ 1.77
MEG3-224ENST00000554639 GCC2Q8IWJ2 1684 aa26.09■■□□□ 1.77
MEG3-224ENST00000554639 ABCA8O94911 1581 aa26.08■■□□□ 1.77
MEG3-224ENST00000554639 PLB1Q6P1J6 1458 aa26.05■■□□□ 1.76
MEG3-224ENST00000554639 ITSN2Q9NZM3 1697 aa26.04■■□□□ 1.76
MEG3-224ENST00000554639 ROCK1Q13464 1354 aa26.01■■□□□ 1.75
MEG3-224ENST00000554639 CHD1O14646 1710 aa26■■□□□ 1.75
MEG3-224ENST00000554639 DNMT1P26358 1616 aaKnown RBP26■■□□□ 1.75
MEG3-224ENST00000554639 SHROOM2Q13796 1616 aa25.98■■□□□ 1.75
MEG3-224ENST00000554639 PRG4Q92954 1404 aaPredicted RBP25.94■■□□□ 1.74
MEG3-224ENST00000554639 DAPK1P53355 1430 aa25.94■■□□□ 1.74
MEG3-224ENST00000554639 ARID3CA6NKF2 412 aa25.9■■□□□ 1.74
MEG3-224ENST00000554639 PTPRGP23470 1445 aa25.9■■□□□ 1.74
MEG3-224ENST00000554639 KIF14Q15058 1648 aa25.89■■□□□ 1.74
MEG3-224ENST00000554639 GPATCH8Q9UKJ3 1502 aaKnown RBP25.89■■□□□ 1.74
MEG3-224ENST00000554639 ATP10BO94823 1461 aa25.89■■□□□ 1.73
MEG3-224ENST00000554639 ABCC5O15440 1437 aa25.88■■□□□ 1.73
MEG3-224ENST00000554639 PLEKHD1A6NEE1 506 aa25.87■■□□□ 1.73
MEG3-224ENST00000554639 CAMSAP2Q08AD1 1489 aa25.84■■□□□ 1.73
MEG3-224ENST00000554639 SIN3AQ96ST3 1273 aa25.83■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms