RNA–Protein interactions for RNA: ENST00000554508.5

ACTN1-213, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 585 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-213ENST00000554508 CARMIL1Q5VZK9 1371 aa14.93□□□□□ -0.02
ACTN1-213ENST00000554508 PRG4Q92954 1404 aaPredicted RBP14.92□□□□□ -0.02
ACTN1-213ENST00000554508 TRHP20396 242 aaPredicted RBP14.92□□□□□ -0.02
ACTN1-213ENST00000554508 KIAA0586Q9BVV6 1533 aa14.91□□□□□ -0.02
ACTN1-213ENST00000554508 RAPGEF2Q9Y4G8 1499 aa14.82□□□□□ -0.04
ACTN1-213ENST00000554508 IQGAP2Q13576 1575 aa14.78□□□□□ -0.04
ACTN1-213ENST00000554508 CARMIL2Q6F5E8 1435 aa14.77□□□□□ -0.04
ACTN1-213ENST00000554508 NPM1P06748 294 aaKnown RBP eCLIP14.75□□□□□ -0.05
ACTN1-213ENST00000554508 PTPRGP23470 1445 aa14.73□□□□□ -0.05
ACTN1-213ENST00000554508 TNIKQ9UKE5 1360 aa14.73□□□□□ -0.05
ACTN1-213ENST00000554508 CTTNBP2Q8WZ74 1663 aa14.71□□□□□ -0.05
ACTN1-213ENST00000554508 ADCY10Q96PN6 1610 aa14.71□□□□□ -0.05
ACTN1-213ENST00000554508 UGGT2Q9NYU1 1516 aa14.71□□□□□ -0.06
ACTN1-213ENST00000554508 PRXQ9BXM0 1461 aa14.7□□□□□ -0.06
ACTN1-213ENST00000554508 KIF13AQ9H1H9 1805 aa14.69□□□□□ -0.06
ACTN1-213ENST00000554508 DISP1Q96F81 1524 aa14.68□□□□□ -0.06
ACTN1-213ENST00000554508 MAPKBP1O60336 1514 aa14.67□□□□□ -0.06
ACTN1-213ENST00000554508 CSRNP3Q8WYN3 585 aa14.67□□□□□ -0.06
ACTN1-213ENST00000554508 EEA1Q15075 1411 aa14.66□□□□□ -0.06
ACTN1-213ENST00000554508 TTBK1Q5TCY1 1321 aaPredicted RBP14.66□□□□□ -0.06
ACTN1-213ENST00000554508 KIAA0556O60303 1618 aa14.64□□□□□ -0.07
ACTN1-213ENST00000554508 ABCC10Q5T3U5 1492 aa14.63□□□□□ -0.07
ACTN1-213ENST00000554508 UHRF1BP1LA0JNW5 1464 aa14.63□□□□□ -0.07
ACTN1-213ENST00000554508 GOLGA3Q08378 1498 aa14.63□□□□□ -0.07
ACTN1-213ENST00000554508 UACAQ9BZF9 1416 aa14.62□□□□□ -0.07
ACTN1-213ENST00000554508 ABCC2Q92887 1545 aa14.61□□□□□ -0.07
ACTN1-213ENST00000554508 FAM69CQ0P6D2 419 aa14.61□□□□□ -0.07
ACTN1-213ENST00000554508 DIP2BQ9P265 1576 aa14.6□□□□□ -0.07
ACTN1-213ENST00000554508 CHIC1Q5VXU3 224 aa14.56□□□□□ -0.08
ACTN1-213ENST00000554508 PLB1Q6P1J6 1458 aa14.56□□□□□ -0.08
ACTN1-213ENST00000554508 FAM9AQ8IZU1 332 aaPredicted RBP14.55□□□□□ -0.08
ACTN1-213ENST00000554508 KDM5BQ9UGL1 1544 aa14.55□□□□□ -0.08
ACTN1-213ENST00000554508 ASXL2Q76L83 1435 aa14.54□□□□□ -0.08
ACTN1-213ENST00000554508 TSPOAP1O95153 1857 aa14.52□□□□□ -0.08
ACTN1-213ENST00000554508 ZCCHC11Q5TAX3 1644 aaKnown RBP14.52□□□□□ -0.09
ACTN1-213ENST00000554508 GLI2P10070 1586 aa14.51□□□□□ -0.09
ACTN1-213ENST00000554508 KIF21BO75037 1637 aa14.5□□□□□ -0.09
ACTN1-213ENST00000554508 ABCA8O94911 1581 aa14.5□□□□□ -0.09
ACTN1-213ENST00000554508 SAMD9Q5K651 1589 aa14.48□□□□□ -0.09
ACTN1-213ENST00000554508 P3H3Q8IVL6 736 aa14.47□□□□□ -0.09
ACTN1-213ENST00000554508 EPRSP07814 1512 aaKnown RBP14.46□□□□□ -0.1
ACTN1-213ENST00000554508 WDR7Q9Y4E6 1490 aa14.44□□□□□ -0.1
ACTN1-213ENST00000554508 KDM6BO15054 1643 aa14.42□□□□□ -0.1
ACTN1-213ENST00000554508 MAP3K4Q9Y6R4 1608 aa14.42□□□□□ -0.1
ACTN1-213ENST00000554508 PPRC1Q5VV67 1664 aaKnown RBP14.42□□□□□ -0.1
ACTN1-213ENST00000554508 EFCAB5A4FU69 1503 aa14.4□□□□□ -0.1
ACTN1-213ENST00000554508 UBTFP17480 764 aaKnown RBP14.39□□□□□ -0.11
ACTN1-213ENST00000554508 RANGAP1P46060 587 aaPredicted RBP14.39□□□□□ -0.11
ACTN1-213ENST00000554508 RAPGEF6Q8TEU7 1601 aa14.39□□□□□ -0.11
ACTN1-213ENST00000554508 ATP10BO94823 1461 aa14.38□□□□□ -0.11
ACTN1-213ENST00000554508 CFAP43Q8NDM7 1665 aa14.38□□□□□ -0.11
ACTN1-213ENST00000554508 TEX14Q8IWB6 1497 aa14.38□□□□□ -0.11
ACTN1-213ENST00000554508 KCNH8Q96L42 1107 aa14.37□□□□□ -0.11
ACTN1-213ENST00000554508 FHOD3Q2V2M9 1422 aa14.36□□□□□ -0.11
ACTN1-213ENST00000554508 AEBP2Q6ZN18 517 aaPredicted RBP14.34□□□□□ -0.11
ACTN1-213ENST00000554508 CD109Q6YHK3 1445 aa14.33□□□□□ -0.11
ACTN1-213ENST00000554508 ARID3CA6NKF2 412 aa14.33□□□□□ -0.12
ACTN1-213ENST00000554508 EHMT2Q96KQ7 1210 aa14.33□□□□□ -0.12
ACTN1-213ENST00000554508 MAGI3Q5TCQ9 1506 aa14.32□□□□□ -0.12
ACTN1-213ENST00000554508 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.32□□□□□ -0.12
ACTN1-213ENST00000554508 HNRNPUL2Q1KMD3 747 aaKnown RBP14.32□□□□□ -0.12
ACTN1-213ENST00000554508 NUP153P49790 1475 aaKnown RBP14.31□□□□□ -0.12
ACTN1-213ENST00000554508 ABCA9Q8IUA7 1624 aa14.28□□□□□ -0.12
ACTN1-213ENST00000554508 ARHGAP35Q9NRY4 1499 aa14.27□□□□□ -0.12
ACTN1-213ENST00000554508 COL17A1Q9UMD9 1497 aaPredicted RBP14.27□□□□□ -0.12
ACTN1-213ENST00000554508 PLEKHD1A6NEE1 506 aa14.27□□□□□ -0.13
ACTN1-213ENST00000554508 FMN1Q68DA7 1419 aa14.26□□□□□ -0.13
ACTN1-213ENST00000554508 PHLDB1Q86UU1 1377 aa14.24□□□□□ -0.13
ACTN1-213ENST00000554508 HECW1Q76N89 1606 aa14.22□□□□□ -0.13
ACTN1-213ENST00000554508 ARAP3Q8WWN8 1544 aa14.2□□□□□ -0.14
ACTN1-213ENST00000554508 ATP1B4Q9UN42 357 aaPredicted RBP14.2□□□□□ -0.14
ACTN1-213ENST00000554508 CDK11AQ9UQ88 783 aaPredicted RBP14.19□□□□□ -0.14
ACTN1-213ENST00000554508 CDK13Q14004 1512 aaKnown RBP14.19□□□□□ -0.14
ACTN1-213ENST00000554508 NEO1Q92859 1461 aa14.18□□□□□ -0.14
ACTN1-213ENST00000554508 KDM4FA0A1W2PPD8 638 aa14.17□□□□□ -0.14
ACTN1-213ENST00000554508 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.15□□□□□ -0.14
ACTN1-213ENST00000554508 CFAP74Q9C0B2 1584 aa14.13□□□□□ -0.15
ACTN1-213ENST00000554508 LRRIQ1Q96JM4 1722 aa14.13□□□□□ -0.15
ACTN1-213ENST00000554508 TTC37Q6PGP7 1564 aa14.13□□□□□ -0.15
ACTN1-213ENST00000554508 CLIP1P30622 1438 aa14.12□□□□□ -0.15
ACTN1-213ENST00000554508 CASKIN1Q8WXD9 1431 aa14.12□□□□□ -0.15
ACTN1-213ENST00000554508 FANCAO15360 1455 aa14.11□□□□□ -0.15
ACTN1-213ENST00000554508 AKNAQ7Z591 1439 aa14.1□□□□□ -0.15
ACTN1-213ENST00000554508 RAPGEF3O95398 923 aa14.1□□□□□ -0.15
ACTN1-213ENST00000554508 ADGRL1O94910 1474 aa14.1□□□□□ -0.15
ACTN1-213ENST00000554508 CCDC18Q5T9S5 1454 aa14.1□□□□□ -0.15
ACTN1-213ENST00000554508 PLCH2O75038 1416 aa14.09□□□□□ -0.15
ACTN1-213ENST00000554508 TROQ12816 1431 aaPredicted RBP14.09□□□□□ -0.15
ACTN1-213ENST00000554508 MYO5CQ9NQX4 1742 aa14.09□□□□□ -0.15
ACTN1-213ENST00000554508 PCF11O94913 1555 aaKnown RBP14.09□□□□□ -0.15
ACTN1-213ENST00000554508 KIF14Q15058 1648 aa14.08□□□□□ -0.16
ACTN1-213ENST00000554508 RICTORQ6R327 1708 aa14.07□□□□□ -0.16
ACTN1-213ENST00000554508 DENND4BO75064 1496 aaPredicted RBP14.07□□□□□ -0.16
ACTN1-213ENST00000554508 FYCO1Q9BQS8 1478 aa14.07□□□□□ -0.16
ACTN1-213ENST00000554508 FRMPD1Q5SYB0 1578 aa14.06□□□□□ -0.16
ACTN1-213ENST00000554508 EFCAB2Q5VUJ9 269 aa14.06□□□□□ -0.16
ACTN1-213ENST00000554508 SCAPERQ9BY12 1400 aa14.02□□□□□ -0.16
ACTN1-213ENST00000554508 CDC42BPBQ9Y5S2 1711 aa14.01□□□□□ -0.17
ACTN1-213ENST00000554508 ZMYM4Q5VZL5 1548 aa14□□□□□ -0.17
ACTN1-213ENST00000554508 MAGI2Q86UL8 1455 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms