RNA–Protein interactions for RNA: ENST00000554325.1

APEX1-207, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 5

Gene APEX1, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-207ENST00000554325 RIMBP3CA6NJZ7 1639 aa20.95■□□□□ 0.94
APEX1-207ENST00000554325 RIMBP3BA6NNM3 1639 aa20.95■□□□□ 0.94
APEX1-207ENST00000554325 RIMBP3Q9UFD9 1639 aa20.95■□□□□ 0.94
APEX1-207ENST00000554325 KIF21BO75037 1637 aa20.92■□□□□ 0.94
APEX1-207ENST00000554325 CTTNBP2Q8WZ74 1663 aa20.92■□□□□ 0.94
APEX1-207ENST00000554325 IQGAP2Q13576 1575 aa20.91■□□□□ 0.94
APEX1-207ENST00000554325 SHROOM2Q13796 1616 aa20.9■□□□□ 0.94
APEX1-207ENST00000554325 JPH4Q96JJ6 628 aa20.9■□□□□ 0.94
APEX1-207ENST00000554325 EHMT2Q96KQ7 1210 aa20.87■□□□□ 0.93
APEX1-207ENST00000554325 PRG4Q92954 1404 aaPredicted RBP20.87■□□□□ 0.93
APEX1-207ENST00000554325 GOLGA3Q08378 1498 aa20.84■□□□□ 0.93
APEX1-207ENST00000554325 UBTFP17480 764 aaKnown RBP20.82■□□□□ 0.92
APEX1-207ENST00000554325 CARMIL2Q6F5E8 1435 aa20.8■□□□□ 0.92
APEX1-207ENST00000554325 ERCC6L2Q5T890 1561 aa20.8■□□□□ 0.92
APEX1-207ENST00000554325 CYB5RLQ6IPT4 315 aa20.79■□□□□ 0.92
APEX1-207ENST00000554325 ARAP1Q96P48 1450 aa20.79■□□□□ 0.92
APEX1-207ENST00000554325 UGGT2Q9NYU1 1516 aa20.76■□□□□ 0.91
APEX1-207ENST00000554325 RANGAP1P46060 587 aaPredicted RBP20.72■□□□□ 0.91
APEX1-207ENST00000554325 TTBK1Q5TCY1 1321 aaPredicted RBP20.71■□□□□ 0.91
APEX1-207ENST00000554325 KIAA0556O60303 1618 aa20.69■□□□□ 0.9
APEX1-207ENST00000554325 TNIKQ9UKE5 1360 aa20.68■□□□□ 0.9
APEX1-207ENST00000554325 DISP1Q96F81 1524 aa20.68■□□□□ 0.9
APEX1-207ENST00000554325 PTPRGP23470 1445 aa20.65■□□□□ 0.9
APEX1-207ENST00000554325 EFCAB5A4FU69 1503 aa20.6■□□□□ 0.89
APEX1-207ENST00000554325 P3H3Q8IVL6 736 aa20.6■□□□□ 0.89
APEX1-207ENST00000554325 SAMD9Q5K651 1589 aa20.59■□□□□ 0.89
APEX1-207ENST00000554325 NPM1P06748 294 aaKnown RBP eCLIP20.54■□□□□ 0.88
APEX1-207ENST00000554325 FHOD3Q2V2M9 1422 aa20.52■□□□□ 0.87
APEX1-207ENST00000554325 UACAQ9BZF9 1416 aa20.51■□□□□ 0.87
APEX1-207ENST00000554325 ADCY10Q96PN6 1610 aa20.5■□□□□ 0.87
APEX1-207ENST00000554325 LOC105371045A0A1W2PR82 267 aa20.49■□□□□ 0.87
APEX1-207ENST00000554325 ABCC2Q92887 1545 aa20.47■□□□□ 0.87
APEX1-207ENST00000554325 CLIP1P30622 1438 aa20.46■□□□□ 0.87
APEX1-207ENST00000554325 ARHGAP35Q9NRY4 1499 aa20.46■□□□□ 0.87
APEX1-207ENST00000554325 UHRF1BP1LA0JNW5 1464 aa20.45■□□□□ 0.86
APEX1-207ENST00000554325 PLB1Q6P1J6 1458 aa20.44■□□□□ 0.86
APEX1-207ENST00000554325 ABCA8O94911 1581 aa20.42■□□□□ 0.86
APEX1-207ENST00000554325 FMN1Q68DA7 1419 aa20.42■□□□□ 0.86
APEX1-207ENST00000554325 CEP162Q5TB80 1403 aa20.41■□□□□ 0.86
APEX1-207ENST00000554325 RAPGEF6Q8TEU7 1601 aa20.41■□□□□ 0.86
APEX1-207ENST00000554325 TRHP20396 242 aaPredicted RBP20.37■□□□□ 0.85
APEX1-207ENST00000554325 ATP1B4Q9UN42 357 aaPredicted RBP20.36■□□□□ 0.85
APEX1-207ENST00000554325 ZCCHC11Q5TAX3 1644 aaKnown RBP20.35■□□□□ 0.85
APEX1-207ENST00000554325 ARID3CA6NKF2 412 aa20.35■□□□□ 0.85
APEX1-207ENST00000554325 MAPKBP1O60336 1514 aa20.34■□□□□ 0.85
APEX1-207ENST00000554325 KDM5BQ9UGL1 1544 aa20.34■□□□□ 0.85
APEX1-207ENST00000554325 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.34■□□□□ 0.85
APEX1-207ENST00000554325 HNRNPUL2Q1KMD3 747 aaKnown RBP20.34■□□□□ 0.85
APEX1-207ENST00000554325 HECW1Q76N89 1606 aa20.31■□□□□ 0.84
APEX1-207ENST00000554325 NUP153P49790 1475 aaKnown RBP20.28■□□□□ 0.84
APEX1-207ENST00000554325 ASXL2Q76L83 1435 aa20.27■□□□□ 0.84
APEX1-207ENST00000554325 PCF11O94913 1555 aaKnown RBP20.25■□□□□ 0.83
APEX1-207ENST00000554325 ATP10BO94823 1461 aa20.24■□□□□ 0.83
APEX1-207ENST00000554325 CASKIN1Q8WXD9 1431 aa20.23■□□□□ 0.83
APEX1-207ENST00000554325 FYCO1Q9BQS8 1478 aa20.23■□□□□ 0.83
APEX1-207ENST00000554325 WDR7Q9Y4E6 1490 aa20.22■□□□□ 0.83
APEX1-207ENST00000554325 FAM69CQ0P6D2 419 aa20.21■□□□□ 0.83
APEX1-207ENST00000554325 ABCC10Q5T3U5 1492 aa20.21■□□□□ 0.83
APEX1-207ENST00000554325 EPRSP07814 1512 aaKnown RBP20.19■□□□□ 0.82
APEX1-207ENST00000554325 CDK13Q14004 1512 aaKnown RBP20.19■□□□□ 0.82
APEX1-207ENST00000554325 DIP2BQ9P265 1576 aa20.19■□□□□ 0.82
APEX1-207ENST00000554325 CCDC18Q5T9S5 1454 aa20.18■□□□□ 0.82
APEX1-207ENST00000554325 PLEKHD1A6NEE1 506 aa20.18■□□□□ 0.82
APEX1-207ENST00000554325 CDK11AQ9UQ88 783 aaPredicted RBP20.18■□□□□ 0.82
APEX1-207ENST00000554325 KCNH8Q96L42 1107 aa20.17■□□□□ 0.82
APEX1-207ENST00000554325 KIF13AQ9H1H9 1805 aa20.17■□□□□ 0.82
APEX1-207ENST00000554325 VPS8Q8N3P4 1428 aa20.15■□□□□ 0.82
APEX1-207ENST00000554325 LRRIQ1Q96JM4 1722 aa20.12■□□□□ 0.81
APEX1-207ENST00000554325 GLI2P10070 1586 aa20.11■□□□□ 0.81
APEX1-207ENST00000554325 TSPOAP1O95153 1857 aa20.08■□□□□ 0.81
APEX1-207ENST00000554325 APLP2Q06481 763 aa20.06■□□□□ 0.8
APEX1-207ENST00000554325 CFAP43Q8NDM7 1665 aa20.05■□□□□ 0.8
APEX1-207ENST00000554325 TROQ12816 1431 aaPredicted RBP20.04■□□□□ 0.8
APEX1-207ENST00000554325 KIF14Q15058 1648 aa20.04■□□□□ 0.8
APEX1-207ENST00000554325 MAP3K4Q9Y6R4 1608 aa20.04■□□□□ 0.8
APEX1-207ENST00000554325 MTUS2Q5JR59 1369 aa20.02■□□□□ 0.8
APEX1-207ENST00000554325 CD109Q6YHK3 1445 aa20.02■□□□□ 0.79
APEX1-207ENST00000554325 ABCA9Q8IUA7 1624 aa20.01■□□□□ 0.79
APEX1-207ENST00000554325 TEX14Q8IWB6 1497 aa20■□□□□ 0.79
APEX1-207ENST00000554325 TIAM1Q13009 1591 aa19.98■□□□□ 0.79
APEX1-207ENST00000554325 EHBP1L1Q8N3D4 1523 aa19.96■□□□□ 0.79
APEX1-207ENST00000554325 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.96■□□□□ 0.79
APEX1-207ENST00000554325 TTC37Q6PGP7 1564 aa19.95■□□□□ 0.78
APEX1-207ENST00000554325 MAGI3Q5TCQ9 1506 aa19.94■□□□□ 0.78
APEX1-207ENST00000554325 PPRC1Q5VV67 1664 aaKnown RBP19.94■□□□□ 0.78
APEX1-207ENST00000554325 MAP3K1Q13233 1512 aa19.92■□□□□ 0.78
APEX1-207ENST00000554325 MYO5CQ9NQX4 1742 aa19.92■□□□□ 0.78
APEX1-207ENST00000554325 CFAP74Q9C0B2 1584 aa19.9■□□□□ 0.78
APEX1-207ENST00000554325 SUPT6HQ7KZ85 1726 aaKnown RBP19.88■□□□□ 0.77
APEX1-207ENST00000554325 KDM6BO15054 1643 aa19.88■□□□□ 0.77
APEX1-207ENST00000554325 LRRC9Q6ZRR7 1453 aa19.87■□□□□ 0.77
APEX1-207ENST00000554325 ARHGAP5Q13017 1502 aa19.86■□□□□ 0.77
APEX1-207ENST00000554325 CCNB3Q8WWL7 1395 aa19.85■□□□□ 0.77
APEX1-207ENST00000554325 FANCAO15360 1455 aa19.85■□□□□ 0.77
APEX1-207ENST00000554325 PLCH2O75038 1416 aa19.85■□□□□ 0.77
APEX1-207ENST00000554325 NEO1Q92859 1461 aa19.84■□□□□ 0.77
APEX1-207ENST00000554325 PHLDB1Q86UU1 1377 aa19.83■□□□□ 0.77
APEX1-207ENST00000554325 EFCAB2Q5VUJ9 269 aa19.83■□□□□ 0.77
APEX1-207ENST00000554325 ARAP3Q8WWN8 1544 aa19.82■□□□□ 0.76
APEX1-207ENST00000554325 PREX2Q70Z35 1606 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms