RNA–Protein interactions for RNA: ENST00000553656.5

TUBB3-202, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 550 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-202ENST00000553656 RIMBP3CA6NJZ7 1639 aa22.8■■□□□ 1.24
TUBB3-202ENST00000553656 RIMBP3BA6NNM3 1639 aa22.8■■□□□ 1.24
TUBB3-202ENST00000553656 KIF21BO75037 1637 aa22.8■■□□□ 1.24
TUBB3-202ENST00000553656 RIMBP3Q9UFD9 1639 aa22.8■■□□□ 1.24
TUBB3-202ENST00000553656 SHROOM2Q13796 1616 aa22.79■■□□□ 1.24
TUBB3-202ENST00000553656 IQGAP2Q13576 1575 aa22.78■■□□□ 1.24
TUBB3-202ENST00000553656 JPH4Q96JJ6 628 aa22.78■■□□□ 1.24
TUBB3-202ENST00000553656 CTTNBP2Q8WZ74 1663 aa22.75■■□□□ 1.23
TUBB3-202ENST00000553656 PRG4Q92954 1404 aaPredicted RBP22.73■■□□□ 1.23
TUBB3-202ENST00000553656 GOLGA3Q08378 1498 aa22.71■■□□□ 1.23
TUBB3-202ENST00000553656 EHMT2Q96KQ7 1210 aa22.68■■□□□ 1.22
TUBB3-202ENST00000553656 ERCC6L2Q5T890 1561 aa22.67■■□□□ 1.22
TUBB3-202ENST00000553656 ARAP1Q96P48 1450 aa22.66■■□□□ 1.22
TUBB3-202ENST00000553656 CARMIL2Q6F5E8 1435 aa22.65■■□□□ 1.22
TUBB3-202ENST00000553656 UBTFP17480 764 aaKnown RBP22.65■■□□□ 1.22
TUBB3-202ENST00000553656 UGGT2Q9NYU1 1516 aa22.64■■□□□ 1.21
TUBB3-202ENST00000553656 CYB5RLQ6IPT4 315 aa22.63■■□□□ 1.21
TUBB3-202ENST00000553656 DISP1Q96F81 1524 aa22.55■■□□□ 1.2
TUBB3-202ENST00000553656 KIAA0556O60303 1618 aa22.54■■□□□ 1.2
TUBB3-202ENST00000553656 TNIKQ9UKE5 1360 aa22.52■■□□□ 1.2
TUBB3-202ENST00000553656 RANGAP1P46060 587 aaPredicted RBP22.52■■□□□ 1.2
TUBB3-202ENST00000553656 PTPRGP23470 1445 aa22.5■■□□□ 1.19
TUBB3-202ENST00000553656 TTBK1Q5TCY1 1321 aaPredicted RBP22.5■■□□□ 1.19
TUBB3-202ENST00000553656 EFCAB5A4FU69 1503 aa22.45■■□□□ 1.18
TUBB3-202ENST00000553656 SAMD9Q5K651 1589 aa22.45■■□□□ 1.18
TUBB3-202ENST00000553656 P3H3Q8IVL6 736 aa22.43■■□□□ 1.18
TUBB3-202ENST00000553656 FHOD3Q2V2M9 1422 aa22.35■■□□□ 1.17
TUBB3-202ENST00000553656 UACAQ9BZF9 1416 aa22.35■■□□□ 1.17
TUBB3-202ENST00000553656 LOC105371045A0A1W2PR82 267 aa22.34■■□□□ 1.17
TUBB3-202ENST00000553656 ADCY10Q96PN6 1610 aa22.33■■□□□ 1.17
TUBB3-202ENST00000553656 NPM1P06748 294 aaKnown RBP eCLIP22.33■■□□□ 1.17
TUBB3-202ENST00000553656 ARHGAP35Q9NRY4 1499 aa22.31■■□□□ 1.16
TUBB3-202ENST00000553656 UHRF1BP1LA0JNW5 1464 aa22.3■■□□□ 1.16
TUBB3-202ENST00000553656 ABCC2Q92887 1545 aa22.3■■□□□ 1.16
TUBB3-202ENST00000553656 CLIP1P30622 1438 aa22.3■■□□□ 1.16
TUBB3-202ENST00000553656 PLB1Q6P1J6 1458 aa22.29■■□□□ 1.16
TUBB3-202ENST00000553656 ABCA8O94911 1581 aa22.26■■□□□ 1.15
TUBB3-202ENST00000553656 CEP162Q5TB80 1403 aa22.24■■□□□ 1.15
TUBB3-202ENST00000553656 FMN1Q68DA7 1419 aa22.23■■□□□ 1.15
TUBB3-202ENST00000553656 RAPGEF6Q8TEU7 1601 aa22.22■■□□□ 1.15
TUBB3-202ENST00000553656 KDM5BQ9UGL1 1544 aa22.18■■□□□ 1.14
TUBB3-202ENST00000553656 MAPKBP1O60336 1514 aa22.16■■□□□ 1.14
TUBB3-202ENST00000553656 ZCCHC11Q5TAX3 1644 aaKnown RBP22.16■■□□□ 1.14
TUBB3-202ENST00000553656 TRHP20396 242 aaPredicted RBP22.14■■□□□ 1.13
TUBB3-202ENST00000553656 ARID3CA6NKF2 412 aa22.13■■□□□ 1.13
TUBB3-202ENST00000553656 ATP1B4Q9UN42 357 aaPredicted RBP22.12■■□□□ 1.13
TUBB3-202ENST00000553656 NUP153P49790 1475 aaKnown RBP22.11■■□□□ 1.13
TUBB3-202ENST00000553656 HECW1Q76N89 1606 aa22.11■■□□□ 1.13
TUBB3-202ENST00000553656 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.1■■□□□ 1.13
TUBB3-202ENST00000553656 HNRNPUL2Q1KMD3 747 aaKnown RBP22.1■■□□□ 1.13
TUBB3-202ENST00000553656 ASXL2Q76L83 1435 aa22.09■■□□□ 1.13
TUBB3-202ENST00000553656 ATP10BO94823 1461 aa22.08■■□□□ 1.12
TUBB3-202ENST00000553656 PCF11O94913 1555 aaKnown RBP22.06■■□□□ 1.12
TUBB3-202ENST00000553656 CASKIN1Q8WXD9 1431 aa22.06■■□□□ 1.12
TUBB3-202ENST00000553656 FYCO1Q9BQS8 1478 aa22.04■■□□□ 1.12
TUBB3-202ENST00000553656 WDR7Q9Y4E6 1490 aa22.03■■□□□ 1.12
TUBB3-202ENST00000553656 ABCC10Q5T3U5 1492 aa22.03■■□□□ 1.12
TUBB3-202ENST00000553656 EPRSP07814 1512 aaKnown RBP22.01■■□□□ 1.11
TUBB3-202ENST00000553656 CDK13Q14004 1512 aaKnown RBP22■■□□□ 1.11
TUBB3-202ENST00000553656 DIP2BQ9P265 1576 aa21.99■■□□□ 1.11
TUBB3-202ENST00000553656 FAM69CQ0P6D2 419 aa21.99■■□□□ 1.11
TUBB3-202ENST00000553656 CCDC18Q5T9S5 1454 aa21.98■■□□□ 1.11
TUBB3-202ENST00000553656 PLEKHD1A6NEE1 506 aa21.97■■□□□ 1.11
TUBB3-202ENST00000553656 VPS8Q8N3P4 1428 aa21.97■■□□□ 1.11
TUBB3-202ENST00000553656 CDK11AQ9UQ88 783 aaPredicted RBP21.96■■□□□ 1.11
TUBB3-202ENST00000553656 KIF13AQ9H1H9 1805 aa21.95■■□□□ 1.1
TUBB3-202ENST00000553656 KCNH8Q96L42 1107 aa21.94■■□□□ 1.1
TUBB3-202ENST00000553656 GLI2P10070 1586 aa21.92■■□□□ 1.1
TUBB3-202ENST00000553656 LRRIQ1Q96JM4 1722 aa21.91■■□□□ 1.1
TUBB3-202ENST00000553656 TROQ12816 1431 aaPredicted RBP21.84■■□□□ 1.09
TUBB3-202ENST00000553656 MAP3K4Q9Y6R4 1608 aa21.83■■□□□ 1.08
TUBB3-202ENST00000553656 CFAP43Q8NDM7 1665 aa21.82■■□□□ 1.08
TUBB3-202ENST00000553656 TSPOAP1O95153 1857 aa21.81■■□□□ 1.08
TUBB3-202ENST00000553656 CD109Q6YHK3 1445 aa21.8■■□□□ 1.08
TUBB3-202ENST00000553656 KIF14Q15058 1648 aa21.8■■□□□ 1.08
TUBB3-202ENST00000553656 ABCA9Q8IUA7 1624 aa21.8■■□□□ 1.08
TUBB3-202ENST00000553656 APLP2Q06481 763 aa21.8■■□□□ 1.08
TUBB3-202ENST00000553656 MTUS2Q5JR59 1369 aa21.79■■□□□ 1.08
TUBB3-202ENST00000553656 TEX14Q8IWB6 1497 aa21.77■■□□□ 1.08
TUBB3-202ENST00000553656 TIAM1Q13009 1591 aa21.77■■□□□ 1.08
TUBB3-202ENST00000553656 MAGI3Q5TCQ9 1506 aa21.75■■□□□ 1.07
TUBB3-202ENST00000553656 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.75■■□□□ 1.07
TUBB3-202ENST00000553656 EHBP1L1Q8N3D4 1523 aa21.74■■□□□ 1.07
TUBB3-202ENST00000553656 MAP3K1Q13233 1512 aa21.73■■□□□ 1.07
TUBB3-202ENST00000553656 TTC37Q6PGP7 1564 aa21.73■■□□□ 1.07
TUBB3-202ENST00000553656 PPRC1Q5VV67 1664 aaKnown RBP21.72■■□□□ 1.07
TUBB3-202ENST00000553656 MYO5CQ9NQX4 1742 aa21.66■■□□□ 1.06
TUBB3-202ENST00000553656 LRRC9Q6ZRR7 1453 aa21.66■■□□□ 1.06
TUBB3-202ENST00000553656 PLCH2O75038 1416 aa21.64■■□□□ 1.06
TUBB3-202ENST00000553656 CFAP74Q9C0B2 1584 aa21.64■■□□□ 1.05
TUBB3-202ENST00000553656 SUPT6HQ7KZ85 1726 aaKnown RBP21.63■■□□□ 1.05
TUBB3-202ENST00000553656 FANCAO15360 1455 aa21.63■■□□□ 1.05
TUBB3-202ENST00000553656 KDM6BO15054 1643 aa21.62■■□□□ 1.05
TUBB3-202ENST00000553656 NEO1Q92859 1461 aa21.62■■□□□ 1.05
TUBB3-202ENST00000553656 PHLDB1Q86UU1 1377 aa21.61■■□□□ 1.05
TUBB3-202ENST00000553656 ARHGAP5Q13017 1502 aa21.61■■□□□ 1.05
TUBB3-202ENST00000553656 ARAP3Q8WWN8 1544 aa21.61■■□□□ 1.05
TUBB3-202ENST00000553656 CCNB3Q8WWL7 1395 aa21.61■■□□□ 1.05
TUBB3-202ENST00000553656 KANK4Q5T7N3 995 aaPredicted RBP21.6■■□□□ 1.05
TUBB3-202ENST00000553656 PREX2Q70Z35 1606 aa21.59■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms