RNA–Protein interactions for RNA: ENST00000553370.5

ACTN1-208, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 605 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-208ENST00000553370 FHAD1B1AJZ9 1412 aa17.51■□□□□ 0.39
ACTN1-208ENST00000553370 ERCC6L2Q5T890 1561 aa17.49■□□□□ 0.39
ACTN1-208ENST00000553370 NUP160Q12769 1436 aa17.47■□□□□ 0.39
ACTN1-208ENST00000553370 SHROOM2Q13796 1616 aa17.47■□□□□ 0.39
ACTN1-208ENST00000553370 KCNA4P22459 653 aa17.46■□□□□ 0.39
ACTN1-208ENST00000553370 RUSC2Q8N2Y8 1516 aa17.38■□□□□ 0.37
ACTN1-208ENST00000553370 PIAS4Q8N2W9 510 aaPredicted RBP17.37■□□□□ 0.37
ACTN1-208ENST00000553370 PRG4Q92954 1404 aaPredicted RBP17.36■□□□□ 0.37
ACTN1-208ENST00000553370 CUL7Q14999 1698 aa17.36■□□□□ 0.37
ACTN1-208ENST00000553370 KIF13AQ9H1H9 1805 aa17.35■□□□□ 0.37
ACTN1-208ENST00000553370 KIF27Q86VH2 1401 aa17.29■□□□□ 0.36
ACTN1-208ENST00000553370 JPH4Q96JJ6 628 aa17.28■□□□□ 0.36
ACTN1-208ENST00000553370 NPM1P06748 294 aaKnown RBP eCLIP17.25■□□□□ 0.35
ACTN1-208ENST00000553370 EHMT2Q96KQ7 1210 aa17.24■□□□□ 0.35
ACTN1-208ENST00000553370 ADCY10Q96PN6 1610 aa17.21■□□□□ 0.35
ACTN1-208ENST00000553370 TSPOAP1O95153 1857 aa17.21■□□□□ 0.35
ACTN1-208ENST00000553370 KIAA0586Q9BVV6 1533 aa17.21■□□□□ 0.34
ACTN1-208ENST00000553370 MAPKBP1O60336 1514 aa17.16■□□□□ 0.34
ACTN1-208ENST00000553370 IGF1RP08069 1367 aa17.16■□□□□ 0.34
ACTN1-208ENST00000553370 TTBK1Q5TCY1 1321 aaPredicted RBP17.16■□□□□ 0.34
ACTN1-208ENST00000553370 DIP2BQ9P265 1576 aa17.15■□□□□ 0.34
ACTN1-208ENST00000553370 FAM69CQ0P6D2 419 aa17.14■□□□□ 0.33
ACTN1-208ENST00000553370 IQGAP2Q13576 1575 aa17.14■□□□□ 0.33
ACTN1-208ENST00000553370 CARMIL1Q5VZK9 1371 aa17.13■□□□□ 0.33
ACTN1-208ENST00000553370 ABCC10Q5T3U5 1492 aa17.12■□□□□ 0.33
ACTN1-208ENST00000553370 CARMIL2Q6F5E8 1435 aa17.12■□□□□ 0.33
ACTN1-208ENST00000553370 KDM6BO15054 1643 aa17.08■□□□□ 0.32
ACTN1-208ENST00000553370 PTPRGP23470 1445 aa17.08■□□□□ 0.32
ACTN1-208ENST00000553370 TNIKQ9UKE5 1360 aa17.04■□□□□ 0.32
ACTN1-208ENST00000553370 CTTNBP2Q8WZ74 1663 aa17.04■□□□□ 0.32
ACTN1-208ENST00000553370 ABCC2Q92887 1545 aa17.01■□□□□ 0.31
ACTN1-208ENST00000553370 RAPGEF2Q9Y4G8 1499 aa17■□□□□ 0.31
ACTN1-208ENST00000553370 MSH5O43196 834 aa17■□□□□ 0.31
ACTN1-208ENST00000553370 KIAA0556O60303 1618 aa16.96■□□□□ 0.31
ACTN1-208ENST00000553370 PPP4R3CPQ6ZMV5 832 aa16.96■□□□□ 0.31
ACTN1-208ENST00000553370 PLB1Q6P1J6 1458 aa16.95■□□□□ 0.3
ACTN1-208ENST00000553370 ASXL2Q76L83 1435 aa16.95■□□□□ 0.3
ACTN1-208ENST00000553370 ZCCHC11Q5TAX3 1644 aaKnown RBP16.94■□□□□ 0.3
ACTN1-208ENST00000553370 DISP1Q96F81 1524 aa16.94■□□□□ 0.3
ACTN1-208ENST00000553370 UGGT2Q9NYU1 1516 aa16.94■□□□□ 0.3
ACTN1-208ENST00000553370 UACAQ9BZF9 1416 aa16.94■□□□□ 0.3
ACTN1-208ENST00000553370 UHRF1BP1LA0JNW5 1464 aa16.93■□□□□ 0.3
ACTN1-208ENST00000553370 PPRC1Q5VV67 1664 aaKnown RBP16.91■□□□□ 0.3
ACTN1-208ENST00000553370 GLI2P10070 1586 aa16.9■□□□□ 0.3
ACTN1-208ENST00000553370 GOLGA3Q08378 1498 aa16.87■□□□□ 0.29
ACTN1-208ENST00000553370 MAP3K4Q9Y6R4 1608 aa16.87■□□□□ 0.29
ACTN1-208ENST00000553370 KDM5BQ9UGL1 1544 aa16.85■□□□□ 0.29
ACTN1-208ENST00000553370 TEX14Q8IWB6 1497 aa16.84■□□□□ 0.29
ACTN1-208ENST00000553370 EPRSP07814 1512 aaKnown RBP16.83■□□□□ 0.28
ACTN1-208ENST00000553370 FAM9AQ8IZU1 332 aaPredicted RBP16.82■□□□□ 0.28
ACTN1-208ENST00000553370 WDR7Q9Y4E6 1490 aa16.8■□□□□ 0.28
ACTN1-208ENST00000553370 CFAP43Q8NDM7 1665 aa16.79■□□□□ 0.28
ACTN1-208ENST00000553370 SLC4A1APQ9BWU0 796 aaKnown RBP16.79■□□□□ 0.28
ACTN1-208ENST00000553370 NCBP3Q53F19 620 aaKnown RBP16.77■□□□□ 0.28
ACTN1-208ENST00000553370 ABCA8O94911 1581 aa16.75■□□□□ 0.27
ACTN1-208ENST00000553370 PRXQ9BXM0 1461 aa16.74■□□□□ 0.27
ACTN1-208ENST00000553370 ADGRL1O94910 1474 aa16.73■□□□□ 0.27
ACTN1-208ENST00000553370 KDM4FA0A1W2PPD8 638 aa16.72■□□□□ 0.27
ACTN1-208ENST00000553370 KCNH8Q96L42 1107 aa16.72■□□□□ 0.27
ACTN1-208ENST00000553370 ARID3CA6NKF2 412 aa16.69■□□□□ 0.26
ACTN1-208ENST00000553370 CD109Q6YHK3 1445 aa16.69■□□□□ 0.26
ACTN1-208ENST00000553370 P3H3Q8IVL6 736 aa16.68■□□□□ 0.26
ACTN1-208ENST00000553370 RAPGEF6Q8TEU7 1601 aa16.66■□□□□ 0.26
ACTN1-208ENST00000553370 SAMD9Q5K651 1589 aa16.65■□□□□ 0.26
ACTN1-208ENST00000553370 COL17A1Q9UMD9 1497 aaPredicted RBP16.65■□□□□ 0.26
ACTN1-208ENST00000553370 MAGI3Q5TCQ9 1506 aa16.65■□□□□ 0.26
ACTN1-208ENST00000553370 CSRNP3Q8WYN3 585 aa16.64■□□□□ 0.25
ACTN1-208ENST00000553370 RANGAP1P46060 587 aaPredicted RBP16.63■□□□□ 0.25
ACTN1-208ENST00000553370 KIF21BO75037 1637 aa16.63■□□□□ 0.25
ACTN1-208ENST00000553370 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.62■□□□□ 0.25
ACTN1-208ENST00000553370 HNRNPUL2Q1KMD3 747 aaKnown RBP16.62■□□□□ 0.25
ACTN1-208ENST00000553370 EEA1Q15075 1411 aa16.61■□□□□ 0.25
ACTN1-208ENST00000553370 ABCA9Q8IUA7 1624 aa16.59■□□□□ 0.25
ACTN1-208ENST00000553370 ATP10BO94823 1461 aa16.56■□□□□ 0.24
ACTN1-208ENST00000553370 HECW2Q9P2P5 1572 aa16.54■□□□□ 0.24
ACTN1-208ENST00000553370 FHOD3Q2V2M9 1422 aa16.53■□□□□ 0.24
ACTN1-208ENST00000553370 ARAP3Q8WWN8 1544 aa16.51■□□□□ 0.23
ACTN1-208ENST00000553370 EFCAB5A4FU69 1503 aa16.5■□□□□ 0.23
ACTN1-208ENST00000553370 CFAP74Q9C0B2 1584 aa16.5■□□□□ 0.23
ACTN1-208ENST00000553370 NPM3O75607 178 aaKnown RBP16.49■□□□□ 0.23
ACTN1-208ENST00000553370 NUP153P49790 1475 aaKnown RBP16.48■□□□□ 0.23
ACTN1-208ENST00000553370 PHLDB1Q86UU1 1377 aa16.48■□□□□ 0.23
ACTN1-208ENST00000553370 NEO1Q92859 1461 aa16.48■□□□□ 0.23
ACTN1-208ENST00000553370 PLEKHD1A6NEE1 506 aa16.43■□□□□ 0.22
ACTN1-208ENST00000553370 ARID4BQ4LE39 1312 aaPredicted RBP16.43■□□□□ 0.22
ACTN1-208ENST00000553370 FRMPD1Q5SYB0 1578 aa16.42■□□□□ 0.22
ACTN1-208ENST00000553370 RICTORQ6R327 1708 aa16.42■□□□□ 0.22
ACTN1-208ENST00000553370 RAPGEF3O95398 923 aa16.41■□□□□ 0.22
ACTN1-208ENST00000553370 TTC37Q6PGP7 1564 aa16.41■□□□□ 0.22
ACTN1-208ENST00000553370 HECW1Q76N89 1606 aa16.41■□□□□ 0.22
ACTN1-208ENST00000553370 BCORL1Q5H9F3 1711 aa16.4■□□□□ 0.22
ACTN1-208ENST00000553370 UBTFP17480 764 aaKnown RBP16.4■□□□□ 0.22
ACTN1-208ENST00000553370 ADAMTSL3P82987 1691 aa16.4■□□□□ 0.22
ACTN1-208ENST00000553370 ARHGEF40Q8TER5 1519 aa16.4■□□□□ 0.22
ACTN1-208ENST00000553370 ATP1B4Q9UN42 357 aaPredicted RBP16.39■□□□□ 0.21
ACTN1-208ENST00000553370 CDK13Q14004 1512 aaKnown RBP16.39■□□□□ 0.21
ACTN1-208ENST00000553370 MYO5CQ9NQX4 1742 aa16.39■□□□□ 0.21
ACTN1-208ENST00000553370 FANCAO15360 1455 aa16.38■□□□□ 0.21
ACTN1-208ENST00000553370 MADDQ8WXG6 1647 aa16.37■□□□□ 0.21
ACTN1-208ENST00000553370 RIMS1Q86UR5 1692 aaKnown RBP16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms