RNA–Protein interactions for RNA: ENST00000553300.5

HNRNPC-205, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-205ENST00000553300 ERCC6L2Q5T890 1561 aa22.41■■□□□ 1.18
HNRNPC-205ENST00000553300 KIAA0586Q9BVV6 1533 aa22.41■■□□□ 1.18
HNRNPC-205ENST00000553300 PRG4Q92954 1404 aaPredicted RBP22.4■■□□□ 1.18
HNRNPC-205ENST00000553300 TRHP20396 242 aaPredicted RBP22.35■■□□□ 1.17
HNRNPC-205ENST00000553300 AEBP2Q6ZN18 517 aaPredicted RBP22.32■■□□□ 1.16
HNRNPC-205ENST00000553300 RAPGEF2Q9Y4G8 1499 aa22.29■■□□□ 1.16
HNRNPC-205ENST00000553300 IQGAP2Q13576 1575 aa22.21■■□□□ 1.15
HNRNPC-205ENST00000553300 CARMIL2Q6F5E8 1435 aa22.2■■□□□ 1.14
HNRNPC-205ENST00000553300 NPM1P06748 294 aaKnown RBP eCLIP22.15■■□□□ 1.14
HNRNPC-205ENST00000553300 PRXQ9BXM0 1461 aa22.14■■□□□ 1.13
HNRNPC-205ENST00000553300 PTPRGP23470 1445 aa22.14■■□□□ 1.13
HNRNPC-205ENST00000553300 TNIKQ9UKE5 1360 aa22.13■■□□□ 1.13
HNRNPC-205ENST00000553300 CSRNP3Q8WYN3 585 aa22.1■■□□□ 1.13
HNRNPC-205ENST00000553300 UGGT2Q9NYU1 1516 aa22.09■■□□□ 1.13
HNRNPC-205ENST00000553300 EEA1Q15075 1411 aa22.09■■□□□ 1.13
HNRNPC-205ENST00000553300 DISP1Q96F81 1524 aa22.06■■□□□ 1.12
HNRNPC-205ENST00000553300 ADCY10Q96PN6 1610 aa22.05■■□□□ 1.12
HNRNPC-205ENST00000553300 CTTNBP2Q8WZ74 1663 aa22.04■■□□□ 1.12
HNRNPC-205ENST00000553300 MAPKBP1O60336 1514 aa22.02■■□□□ 1.12
HNRNPC-205ENST00000553300 TTBK1Q5TCY1 1321 aaPredicted RBP22.01■■□□□ 1.11
HNRNPC-205ENST00000553300 GOLGA3Q08378 1498 aa21.99■■□□□ 1.11
HNRNPC-205ENST00000553300 KIAA0556O60303 1618 aa21.98■■□□□ 1.11
HNRNPC-205ENST00000553300 UHRF1BP1LA0JNW5 1464 aa21.97■■□□□ 1.11
HNRNPC-205ENST00000553300 UACAQ9BZF9 1416 aa21.96■■□□□ 1.11
HNRNPC-205ENST00000553300 CHIC1Q5VXU3 224 aa21.96■■□□□ 1.11
HNRNPC-205ENST00000553300 ABCC2Q92887 1545 aa21.96■■□□□ 1.11
HNRNPC-205ENST00000553300 ABCC10Q5T3U5 1492 aa21.95■■□□□ 1.11
HNRNPC-205ENST00000553300 KIF13AQ9H1H9 1805 aa21.94■■□□□ 1.1
HNRNPC-205ENST00000553300 FAM69CQ0P6D2 419 aa21.93■■□□□ 1.1
HNRNPC-205ENST00000553300 FAM9AQ8IZU1 332 aaPredicted RBP21.9■■□□□ 1.1
HNRNPC-205ENST00000553300 DIP2BQ9P265 1576 aa21.87■■□□□ 1.09
HNRNPC-205ENST00000553300 PLB1Q6P1J6 1458 aa21.86■■□□□ 1.09
HNRNPC-205ENST00000553300 KDM5BQ9UGL1 1544 aa21.85■■□□□ 1.09
HNRNPC-205ENST00000553300 ASXL2Q76L83 1435 aa21.82■■□□□ 1.08
HNRNPC-205ENST00000553300 KIF21BO75037 1637 aa21.82■■□□□ 1.08
HNRNPC-205ENST00000553300 ABCA8O94911 1581 aa21.77■■□□□ 1.08
HNRNPC-205ENST00000553300 SAMD9Q5K651 1589 aa21.76■■□□□ 1.07
HNRNPC-205ENST00000553300 ZCCHC11Q5TAX3 1644 aaKnown RBP21.76■■□□□ 1.07
HNRNPC-205ENST00000553300 GLI2P10070 1586 aa21.75■■□□□ 1.07
HNRNPC-205ENST00000553300 P3H3Q8IVL6 736 aa21.74■■□□□ 1.07
HNRNPC-205ENST00000553300 EPRSP07814 1512 aaKnown RBP21.7■■□□□ 1.06
HNRNPC-205ENST00000553300 TSPOAP1O95153 1857 aa21.68■■□□□ 1.06
HNRNPC-205ENST00000553300 WDR7Q9Y4E6 1490 aa21.68■■□□□ 1.06
HNRNPC-205ENST00000553300 UBTFP17480 764 aaKnown RBP21.68■■□□□ 1.06
HNRNPC-205ENST00000553300 RANGAP1P46060 587 aaPredicted RBP21.66■■□□□ 1.06
HNRNPC-205ENST00000553300 EFCAB5A4FU69 1503 aa21.65■■□□□ 1.06
HNRNPC-205ENST00000553300 RAPGEF6Q8TEU7 1601 aa21.61■■□□□ 1.05
HNRNPC-205ENST00000553300 FHOD3Q2V2M9 1422 aa21.6■■□□□ 1.05
HNRNPC-205ENST00000553300 ATP10BO94823 1461 aa21.6■■□□□ 1.05
HNRNPC-205ENST00000553300 KDM6BO15054 1643 aa21.6■■□□□ 1.05
HNRNPC-205ENST00000553300 MAP3K4Q9Y6R4 1608 aa21.6■■□□□ 1.05
HNRNPC-205ENST00000553300 TEX14Q8IWB6 1497 aa21.59■■□□□ 1.05
HNRNPC-205ENST00000553300 KCNH8Q96L42 1107 aa21.58■■□□□ 1.04
HNRNPC-205ENST00000553300 PPRC1Q5VV67 1664 aaKnown RBP21.57■■□□□ 1.04
HNRNPC-205ENST00000553300 EHMT2Q96KQ7 1210 aa21.57■■□□□ 1.04
HNRNPC-205ENST00000553300 ARID3CA6NKF2 412 aa21.54■■□□□ 1.04
HNRNPC-205ENST00000553300 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.53■■□□□ 1.04
HNRNPC-205ENST00000553300 HNRNPUL2Q1KMD3 747 aaKnown RBP21.53■■□□□ 1.04
HNRNPC-205ENST00000553300 CFAP43Q8NDM7 1665 aa21.53■■□□□ 1.04
HNRNPC-205ENST00000553300 CD109Q6YHK3 1445 aa21.52■■□□□ 1.04
HNRNPC-205ENST00000553300 NUP153P49790 1475 aaKnown RBP21.52■■□□□ 1.04
HNRNPC-205ENST00000553300 MAGI3Q5TCQ9 1506 aa21.5■■□□□ 1.03
HNRNPC-205ENST00000553300 FMN1Q68DA7 1419 aa21.49■■□□□ 1.03
HNRNPC-205ENST00000553300 PLEKHD1A6NEE1 506 aa21.47■■□□□ 1.03
HNRNPC-205ENST00000553300 ARHGAP35Q9NRY4 1499 aa21.47■■□□□ 1.03
HNRNPC-205ENST00000553300 ABCA9Q8IUA7 1624 aa21.42■■□□□ 1.02
HNRNPC-205ENST00000553300 COL17A1Q9UMD9 1497 aaPredicted RBP21.41■■□□□ 1.02
HNRNPC-205ENST00000553300 PHLDB1Q86UU1 1377 aa21.39■■□□□ 1.02
HNRNPC-205ENST00000553300 HECW1Q76N89 1606 aa21.36■■□□□ 1.01
HNRNPC-205ENST00000553300 ATP1B4Q9UN42 357 aaPredicted RBP21.36■■□□□ 1.01
HNRNPC-205ENST00000553300 CDK11AQ9UQ88 783 aaPredicted RBP21.36■■□□□ 1.01
HNRNPC-205ENST00000553300 ARAP3Q8WWN8 1544 aa21.33■■□□□ 1
HNRNPC-205ENST00000553300 NEO1Q92859 1461 aa21.31■■□□□ 1
HNRNPC-205ENST00000553300 CDK13Q14004 1512 aaKnown RBP21.31■■□□□ 1
HNRNPC-205ENST00000553300 CLIP1P30622 1438 aa21.28■■□□□ 1
HNRNPC-205ENST00000553300 CASKIN1Q8WXD9 1431 aa21.26■□□□□ 0.99
HNRNPC-205ENST00000553300 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.26■□□□□ 0.991e-13■■■□□ 15.2
HNRNPC-205ENST00000553300 KDM4FA0A1W2PPD8 638 aa21.23■□□□□ 0.99
HNRNPC-205ENST00000553300 CCDC18Q5T9S5 1454 aa21.22■□□□□ 0.99
HNRNPC-205ENST00000553300 CFAP74Q9C0B2 1584 aa21.21■□□□□ 0.99
HNRNPC-205ENST00000553300 FANCAO15360 1455 aa21.2■□□□□ 0.98
HNRNPC-205ENST00000553300 TROQ12816 1431 aaPredicted RBP21.2■□□□□ 0.98
HNRNPC-205ENST00000553300 TTC37Q6PGP7 1564 aa21.19■□□□□ 0.98
HNRNPC-205ENST00000553300 FYCO1Q9BQS8 1478 aa21.18■□□□□ 0.98
HNRNPC-205ENST00000553300 PLCH2O75038 1416 aa21.18■□□□□ 0.98
HNRNPC-205ENST00000553300 AKNAQ7Z591 1439 aa21.18■□□□□ 0.98
HNRNPC-205ENST00000553300 PCF11O94913 1555 aaKnown RBP21.18■□□□□ 0.98
HNRNPC-205ENST00000553300 RAPGEF3O95398 923 aa21.17■□□□□ 0.98
HNRNPC-205ENST00000553300 LRRIQ1Q96JM4 1722 aa21.16■□□□□ 0.98
HNRNPC-205ENST00000553300 KIF14Q15058 1648 aa21.16■□□□□ 0.98
HNRNPC-205ENST00000553300 DENND4BO75064 1496 aaPredicted RBP21.14■□□□□ 0.97
HNRNPC-205ENST00000553300 ADGRL1O94910 1474 aa21.14■□□□□ 0.97
HNRNPC-205ENST00000553300 EFCAB2Q5VUJ9 269 aa21.13■□□□□ 0.97
HNRNPC-205ENST00000553300 MYO5CQ9NQX4 1742 aa21.11■□□□□ 0.97
HNRNPC-205ENST00000553300 CEP162Q5TB80 1403 aa21.11■□□□□ 0.97
HNRNPC-205ENST00000553300 FRMPD1Q5SYB0 1578 aa21.08■□□□□ 0.96
HNRNPC-205ENST00000553300 RICTORQ6R327 1708 aa21.07■□□□□ 0.96
HNRNPC-205ENST00000553300 SCAPERQ9BY12 1400 aa21.06■□□□□ 0.96
HNRNPC-205ENST00000553300 MAGI2Q86UL8 1455 aa21.04■□□□□ 0.96
HNRNPC-205ENST00000553300 ARHGAP5Q13017 1502 aa21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms