RNA–Protein interactions for RNA: ENST00000553237.5

CDK4-215, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 952 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-215ENST00000553237 CARMIL1Q5VZK9 1371 aa27.29■■□□□ 1.96
CDK4-215ENST00000553237 CUL7Q14999 1698 aa27.29■■□□□ 1.96
CDK4-215ENST00000553237 RUSC2Q8N2Y8 1516 aa27.28■■□□□ 1.96
CDK4-215ENST00000553237 KIAA0586Q9BVV6 1533 aa27.22■■□□□ 1.95
CDK4-215ENST00000553237 TTBK1Q5TCY1 1321 aaPredicted RBP27.04■■□□□ 1.92
CDK4-215ENST00000553237 RAPGEF2Q9Y4G8 1499 aa27.04■■□□□ 1.92
CDK4-215ENST00000553237 NPM1P06748 294 aaKnown RBP eCLIP27.01■■□□□ 1.91
CDK4-215ENST00000553237 IQGAP2Q13576 1575 aa26.98■■□□□ 1.91
CDK4-215ENST00000553237 PTPRGP23470 1445 aa26.97■■□□□ 1.91
CDK4-215ENST00000553237 CARMIL2Q6F5E8 1435 aa26.96■■□□□ 1.91
CDK4-215ENST00000553237 ADCY10Q96PN6 1610 aa26.93■■□□□ 1.9
CDK4-215ENST00000553237 TNIKQ9UKE5 1360 aa26.92■■□□□ 1.9
CDK4-215ENST00000553237 DISP1Q96F81 1524 aa26.85■■□□□ 1.89
CDK4-215ENST00000553237 FAM69CQ0P6D2 419 aa26.85■■□□□ 1.89
CDK4-215ENST00000553237 PRXQ9BXM0 1461 aa26.82■■□□□ 1.88
CDK4-215ENST00000553237 UGGT2Q9NYU1 1516 aa26.82■■□□□ 1.88
CDK4-215ENST00000553237 MAPKBP1O60336 1514 aa26.81■■□□□ 1.88
CDK4-215ENST00000553237 KIF13AQ9H1H9 1805 aa26.81■■□□□ 1.88
CDK4-215ENST00000553237 ABCC10Q5T3U5 1492 aa26.8■■□□□ 1.88
CDK4-215ENST00000553237 CSRNP3Q8WYN3 585 aa26.77■■□□□ 1.88
CDK4-215ENST00000553237 UACAQ9BZF9 1416 aa26.74■■□□□ 1.87
CDK4-215ENST00000553237 ABCC2Q92887 1545 aa26.73■■□□□ 1.87
CDK4-215ENST00000553237 KIAA0556O60303 1618 aa26.72■■□□□ 1.87
CDK4-215ENST00000553237 CTTNBP2Q8WZ74 1663 aa26.72■■□□□ 1.87
CDK4-215ENST00000553237 DIP2BQ9P265 1576 aa26.71■■□□□ 1.87
CDK4-215ENST00000553237 UHRF1BP1LA0JNW5 1464 aa26.69■■□□□ 1.86
CDK4-215ENST00000553237 FAM9AQ8IZU1 332 aaPredicted RBP26.68■■□□□ 1.86
CDK4-215ENST00000553237 GOLGA3Q08378 1498 aa26.64■■□□□ 1.86
CDK4-215ENST00000553237 ASXL2Q76L83 1435 aa26.64■■□□□ 1.85
CDK4-215ENST00000553237 EEA1Q15075 1411 aa26.61■■□□□ 1.85
CDK4-215ENST00000553237 P3H3Q8IVL6 736 aa26.6■■□□□ 1.85
CDK4-215ENST00000553237 PLB1Q6P1J6 1458 aa26.59■■□□□ 1.85
CDK4-215ENST00000553237 KDM5BQ9UGL1 1544 aa26.59■■□□□ 1.85
CDK4-215ENST00000553237 CHIC1Q5VXU3 224 aa26.56■■□□□ 1.84
CDK4-215ENST00000553237 TSPOAP1O95153 1857 aa26.54■■□□□ 1.84
CDK4-215ENST00000553237 ZCCHC11Q5TAX3 1644 aaKnown RBP26.51■■□□□ 1.83
CDK4-215ENST00000553237 RANGAP1P46060 587 aaPredicted RBP26.51■■□□□ 1.83
CDK4-215ENST00000553237 ABCA8O94911 1581 aa26.48■■□□□ 1.83
CDK4-215ENST00000553237 GLI2P10070 1586 aa26.46■■□□□ 1.83
CDK4-215ENST00000553237 EPRSP07814 1512 aaKnown RBP26.46■■□□□ 1.83
CDK4-215ENST00000553237 ARID3CA6NKF2 412 aa26.44■■□□□ 1.82
CDK4-215ENST00000553237 AEBP2Q6ZN18 517 aaPredicted RBP26.43■■□□□ 1.82
CDK4-215ENST00000553237 EHMT2Q96KQ7 1210 aa26.43■■□□□ 1.82
CDK4-215ENST00000553237 KDM6BO15054 1643 aa26.41■■□□□ 1.82
CDK4-215ENST00000553237 WDR7Q9Y4E6 1490 aa26.4■■□□□ 1.82
CDK4-215ENST00000553237 KCNH8Q96L42 1107 aa26.39■■□□□ 1.82
CDK4-215ENST00000553237 SAMD9Q5K651 1589 aa26.38■■□□□ 1.81
CDK4-215ENST00000553237 KIF21BO75037 1637 aa26.36■■□□□ 1.81
CDK4-215ENST00000553237 PPRC1Q5VV67 1664 aaKnown RBP26.35■■□□□ 1.81
CDK4-215ENST00000553237 MAP3K4Q9Y6R4 1608 aa26.32■■□□□ 1.8
CDK4-215ENST00000553237 FHOD3Q2V2M9 1422 aa26.31■■□□□ 1.8
CDK4-215ENST00000553237 ATP10BO94823 1461 aa26.31■■□□□ 1.8
CDK4-215ENST00000553237 UBTFP17480 764 aaKnown RBP26.31■■□□□ 1.8
CDK4-215ENST00000553237 TEX14Q8IWB6 1497 aa26.26■■□□□ 1.79
CDK4-215ENST00000553237 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.26■■□□□ 1.79
CDK4-215ENST00000553237 HNRNPUL2Q1KMD3 747 aaKnown RBP26.26■■□□□ 1.79
CDK4-215ENST00000553237 CD109Q6YHK3 1445 aa26.25■■□□□ 1.79
CDK4-215ENST00000553237 RAPGEF6Q8TEU7 1601 aa26.25■■□□□ 1.79
CDK4-215ENST00000553237 COL17A1Q9UMD9 1497 aaPredicted RBP26.24■■□□□ 1.79
CDK4-215ENST00000553237 NUP153P49790 1475 aaKnown RBP26.18■■□□□ 1.78
CDK4-215ENST00000553237 EFCAB5A4FU69 1503 aa26.18■■□□□ 1.78
CDK4-215ENST00000553237 CFAP43Q8NDM7 1665 aa26.16■■□□□ 1.78
CDK4-215ENST00000553237 MAGI3Q5TCQ9 1506 aa26.16■■□□□ 1.78
CDK4-215ENST00000553237 KDM4FA0A1W2PPD8 638 aa26.11■■□□□ 1.77
CDK4-215ENST00000553237 PLEKHD1A6NEE1 506 aa26.08■■□□□ 1.77
CDK4-215ENST00000553237 ATP1B4Q9UN42 357 aaPredicted RBP26.06■■□□□ 1.76
CDK4-215ENST00000553237 ARHGAP35Q9NRY4 1499 aa26.05■■□□□ 1.76
CDK4-215ENST00000553237 ABCA9Q8IUA7 1624 aa26.03■■□□□ 1.76
CDK4-215ENST00000553237 FMN1Q68DA7 1419 aa25.99■■□□□ 1.75
CDK4-215ENST00000553237 CDK13Q14004 1512 aaKnown RBP25.98■■□□□ 1.75
CDK4-215ENST00000553237 ARAP3Q8WWN8 1544 aa25.94■■□□□ 1.74
CDK4-215ENST00000553237 PHLDB1Q86UU1 1377 aa25.93■■□□□ 1.74
CDK4-215ENST00000553237 ADGRL1O94910 1474 aa25.92■■□□□ 1.74
CDK4-215ENST00000553237 RAPGEF3O95398 923 aa25.92■■□□□ 1.74
CDK4-215ENST00000553237 NEO1Q92859 1461 aa25.9■■□□□ 1.74
CDK4-215ENST00000553237 HECW1Q76N89 1606 aa25.88■■□□□ 1.73
CDK4-215ENST00000553237 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.88■■□□□ 1.732e-6■■■■□ 26.7
CDK4-215ENST00000553237 CDK11AQ9UQ88 783 aaPredicted RBP25.85■■□□□ 1.73
CDK4-215ENST00000553237 TTC37Q6PGP7 1564 aa25.82■■□□□ 1.72
CDK4-215ENST00000553237 AKNAQ7Z591 1439 aa25.8■■□□□ 1.72
CDK4-215ENST00000553237 FANCAO15360 1455 aa25.8■■□□□ 1.72
CDK4-215ENST00000553237 CLIP1P30622 1438 aa25.77■■□□□ 1.72
CDK4-215ENST00000553237 DENND4BO75064 1496 aaPredicted RBP25.75■■□□□ 1.71
CDK4-215ENST00000553237 CASKIN1Q8WXD9 1431 aa25.75■■□□□ 1.71
CDK4-215ENST00000553237 FRMPD1Q5SYB0 1578 aa25.74■■□□□ 1.71
CDK4-215ENST00000553237 PLCH2O75038 1416 aa25.74■■□□□ 1.71
CDK4-215ENST00000553237 TROQ12816 1431 aaPredicted RBP25.74■■□□□ 1.71
CDK4-215ENST00000553237 LRRIQ1Q96JM4 1722 aa25.72■■□□□ 1.71
CDK4-215ENST00000553237 PCF11O94913 1555 aaKnown RBP25.72■■□□□ 1.71
CDK4-215ENST00000553237 CFAP74Q9C0B2 1584 aa25.71■■□□□ 1.71
CDK4-215ENST00000553237 KIF14Q15058 1648 aa25.7■■□□□ 1.71
CDK4-215ENST00000553237 EFCAB2Q5VUJ9 269 aa25.68■■□□□ 1.7
CDK4-215ENST00000553237 ARID4BQ4LE39 1312 aaPredicted RBP25.66■■□□□ 1.7
CDK4-215ENST00000553237 SCAPERQ9BY12 1400 aa25.66■■□□□ 1.7
CDK4-215ENST00000553237 CCDC18Q5T9S5 1454 aa25.66■■□□□ 1.7
CDK4-215ENST00000553237 RICTORQ6R327 1708 aa25.65■■□□□ 1.7
CDK4-215ENST00000553237 FYCO1Q9BQS8 1478 aa25.63■■□□□ 1.69
CDK4-215ENST00000553237 MYO5CQ9NQX4 1742 aa25.62■■□□□ 1.69
CDK4-215ENST00000553237 ARHGAP5Q13017 1502 aa25.58■■□□□ 1.69
CDK4-215ENST00000553237 POGZQ7Z3K3 1410 aa25.58■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 109.6 ms