RNA–Protein interactions for RNA: ENST00000552545.1

AC055716.2-201, humanhuman

BASIC

Gene AC055716.2, Length 2,441 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055716.2-201ENST00000552545 CTTNBP2Q8WZ74 1663 aa13.97□□□□□ -0.17
AC055716.2-201ENST00000552545 CEP162Q5TB80 1403 aa13.94□□□□□ -0.18
AC055716.2-201ENST00000552545 CEP170Q5SW79 1584 aa13.91□□□□□ -0.18
AC055716.2-201ENST00000552545 CLIP1P30622 1438 aa13.9□□□□□ -0.18
AC055716.2-201ENST00000552545 P3H3Q8IVL6 736 aa13.89□□□□□ -0.19
AC055716.2-201ENST00000552545 IQGAP2Q13576 1575 aa13.88□□□□□ -0.19
AC055716.2-201ENST00000552545 KIAA0586Q9BVV6 1533 aa13.86□□□□□ -0.19
AC055716.2-201ENST00000552545 NUP160Q12769 1436 aa13.86□□□□□ -0.19
AC055716.2-201ENST00000552545 TTBK1Q5TCY1 1321 aaPredicted RBP13.83□□□□□ -0.2
AC055716.2-201ENST00000552545 JPH4Q96JJ6 628 aa13.82□□□□□ -0.2
AC055716.2-201ENST00000552545 OSCARQ8IYS5 282 aa13.82□□□□□ -0.2
AC055716.2-201ENST00000552545 ARHGAP35Q9NRY4 1499 aa13.81□□□□□ -0.2
AC055716.2-201ENST00000552545 FHOD3Q2V2M9 1422 aa13.78□□□□□ -0.2
AC055716.2-201ENST00000552545 EFCAB5A4FU69 1503 aa13.77□□□□□ -0.2
AC055716.2-201ENST00000552545 ARAP1Q96P48 1450 aa13.77□□□□□ -0.2
AC055716.2-201ENST00000552545 UGGT2Q9NYU1 1516 aa13.77□□□□□ -0.21
AC055716.2-201ENST00000552545 SAMD9Q5K651 1589 aa13.76□□□□□ -0.21
AC055716.2-201ENST00000552545 CLASP1Q7Z460 1538 aa13.75□□□□□ -0.21
AC055716.2-201ENST00000552545 ATP1B4Q9UN42 357 aaPredicted RBP13.75□□□□□ -0.21
AC055716.2-201ENST00000552545 PRG4Q92954 1404 aaPredicted RBP13.75□□□□□ -0.21
AC055716.2-201ENST00000552545 CARMIL2Q6F5E8 1435 aa13.74□□□□□ -0.21
AC055716.2-201ENST00000552545 KIAA0556O60303 1618 aa13.73□□□□□ -0.21
AC055716.2-201ENST00000552545 DISP1Q96F81 1524 aa13.73□□□□□ -0.21
AC055716.2-201ENST00000552545 VPS8Q8N3P4 1428 aa13.71□□□□□ -0.21
AC055716.2-201ENST00000552545 SHROOM2Q13796 1616 aa13.71□□□□□ -0.21
AC055716.2-201ENST00000552545 ERCC6L2Q5T890 1561 aa13.69□□□□□ -0.22
AC055716.2-201ENST00000552545 PPARGC1BQ86YN6 1023 aaKnown RBP13.69□□□□□ -0.22
AC055716.2-201ENST00000552545 APLP2Q06481 763 aa13.68□□□□□ -0.22
AC055716.2-201ENST00000552545 FMN1Q68DA7 1419 aa13.68□□□□□ -0.22
AC055716.2-201ENST00000552545 ARID3CA6NKF2 412 aa13.64□□□□□ -0.23
AC055716.2-201ENST00000552545 PCF11O94913 1555 aaKnown RBP13.64□□□□□ -0.23
AC055716.2-201ENST00000552545 PTPRGP23470 1445 aa13.63□□□□□ -0.23
AC055716.2-201ENST00000552545 CASKIN1Q8WXD9 1431 aa13.6□□□□□ -0.23
AC055716.2-201ENST00000552545 PLB1Q6P1J6 1458 aa13.59□□□□□ -0.23
AC055716.2-201ENST00000552545 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.59□□□□□ -0.23
AC055716.2-201ENST00000552545 HNRNPUL2Q1KMD3 747 aaKnown RBP13.59□□□□□ -0.23
AC055716.2-201ENST00000552545 FYCO1Q9BQS8 1478 aa13.59□□□□□ -0.23
AC055716.2-201ENST00000552545 RAPGEF6Q8TEU7 1601 aa13.59□□□□□ -0.23
AC055716.2-201ENST00000552545 HECW1Q76N89 1606 aa13.57□□□□□ -0.24
AC055716.2-201ENST00000552545 LRRIQ1Q96JM4 1722 aa13.56□□□□□ -0.24
AC055716.2-201ENST00000552545 ARHGEF11O15085 1522 aa13.56□□□□□ -0.24
AC055716.2-201ENST00000552545 SLC24A1O60721 1099 aa13.54□□□□□ -0.24
AC055716.2-201ENST00000552545 ABCA8O94911 1581 aa13.53□□□□□ -0.24
AC055716.2-201ENST00000552545 UACAQ9BZF9 1416 aa13.53□□□□□ -0.24
AC055716.2-201ENST00000552545 KANK4Q5T7N3 995 aaPredicted RBP13.53□□□□□ -0.24
AC055716.2-201ENST00000552545 RIMBP3CA6NJZ7 1639 aa13.53□□□□□ -0.24
AC055716.2-201ENST00000552545 RIMBP3BA6NNM3 1639 aa13.53□□□□□ -0.24
AC055716.2-201ENST00000552545 RIMBP3Q9UFD9 1639 aa13.53□□□□□ -0.24
AC055716.2-201ENST00000552545 TIAM1Q13009 1591 aa13.53□□□□□ -0.24
AC055716.2-201ENST00000552545 CDK13Q14004 1512 aaKnown RBP13.52□□□□□ -0.24
AC055716.2-201ENST00000552545 NUP153P49790 1475 aaKnown RBP13.52□□□□□ -0.24
AC055716.2-201ENST00000552545 EPRSP07814 1512 aaKnown RBP13.52□□□□□ -0.25
AC055716.2-201ENST00000552545 CFAP43Q8NDM7 1665 aa13.51□□□□□ -0.25
AC055716.2-201ENST00000552545 CYB5RLQ6IPT4 315 aa13.51□□□□□ -0.25
AC055716.2-201ENST00000552545 CCDC18Q5T9S5 1454 aa13.5□□□□□ -0.25
AC055716.2-201ENST00000552545 ABCC2Q92887 1545 aa13.48□□□□□ -0.25
AC055716.2-201ENST00000552545 MTUS2Q5JR59 1369 aa13.48□□□□□ -0.25
AC055716.2-201ENST00000552545 MAP3K1Q13233 1512 aa13.47□□□□□ -0.25
AC055716.2-201ENST00000552545 LRRC9Q6ZRR7 1453 aa13.46□□□□□ -0.25
AC055716.2-201ENST00000552545 CDK11AQ9UQ88 783 aaPredicted RBP13.46□□□□□ -0.25
AC055716.2-201ENST00000552545 ATP10BO94823 1461 aa13.46□□□□□ -0.26
AC055716.2-201ENST00000552545 ADCY10Q96PN6 1610 aa13.45□□□□□ -0.26
AC055716.2-201ENST00000552545 PLEKHD1A6NEE1 506 aa13.44□□□□□ -0.26
AC055716.2-201ENST00000552545 NPM1P06748 294 aaKnown RBP eCLIP13.44□□□□□ -0.26
AC055716.2-201ENST00000552545 UHRF1BP1LA0JNW5 1464 aa13.43□□□□□ -0.26
AC055716.2-201ENST00000552545 ZCCHC11Q5TAX3 1644 aaKnown RBP13.43□□□□□ -0.26
AC055716.2-201ENST00000552545 MAGI3Q5TCQ9 1506 aa13.42□□□□□ -0.26
AC055716.2-201ENST00000552545 EHBP1L1Q8N3D4 1523 aa13.4□□□□□ -0.26
AC055716.2-201ENST00000552545 KCNH8Q96L42 1107 aa13.4□□□□□ -0.26
AC055716.2-201ENST00000552545 SUPT6HQ7KZ85 1726 aaKnown RBP13.39□□□□□ -0.27
AC055716.2-201ENST00000552545 KDM5BQ9UGL1 1544 aa13.39□□□□□ -0.27
AC055716.2-201ENST00000552545 TRIM26Q12899 539 aaPredicted RBP13.38□□□□□ -0.27
AC055716.2-201ENST00000552545 TROQ12816 1431 aaPredicted RBP13.37□□□□□ -0.27
AC055716.2-201ENST00000552545 NCOA2Q15596 1464 aa13.36□□□□□ -0.27
AC055716.2-201ENST00000552545 PCGF6Q9BYE7 350 aa13.35□□□□□ -0.27
AC055716.2-201ENST00000552545 DNAJC5Q9H3Z4 198 aa13.35□□□□□ -0.27
AC055716.2-201ENST00000552545 KIF14Q15058 1648 aa13.35□□□□□ -0.27
AC055716.2-201ENST00000552545 PHLDB1Q86UU1 1377 aa13.34□□□□□ -0.27
AC055716.2-201ENST00000552545 ASXL2Q76L83 1435 aa13.32□□□□□ -0.28
AC055716.2-201ENST00000552545 CCNB3Q8WWL7 1395 aa13.31□□□□□ -0.28
AC055716.2-201ENST00000552545 FAM50AQ14320 339 aaKnown RBP13.3□□□□□ -0.28
AC055716.2-201ENST00000552545 WDR7Q9Y4E6 1490 aa13.3□□□□□ -0.28
AC055716.2-201ENST00000552545 ITGAEP38570 1179 aa13.28□□□□□ -0.28
AC055716.2-201ENST00000552545 ZNF777Q9ULD5 760 aaPredicted RBP13.28□□□□□ -0.28
AC055716.2-201ENST00000552545 MYOM3Q5VTT5 1437 aa13.28□□□□□ -0.28
AC055716.2-201ENST00000552545 CFDP1Q9UEE9 299 aaPredicted RBP13.26□□□□□ -0.29
AC055716.2-201ENST00000552545 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.26□□□□□ -0.29
AC055716.2-201ENST00000552545 TTC37Q6PGP7 1564 aa13.25□□□□□ -0.29
AC055716.2-201ENST00000552545 FGD6Q6ZV73 1430 aa13.25□□□□□ -0.29
AC055716.2-201ENST00000552545 CDC42BPAQ5VT25 1732 aa13.25□□□□□ -0.29
AC055716.2-201ENST00000552545 ABCC10Q5T3U5 1492 aa13.25□□□□□ -0.29
AC055716.2-201ENST00000552545 ITSN2Q9NZM3 1697 aa13.25□□□□□ -0.29
AC055716.2-201ENST00000552545 RRBP1Q9P2E9 1410 aaKnown RBP13.24□□□□□ -0.29
AC055716.2-201ENST00000552545 GPATCH8Q9UKJ3 1502 aaKnown RBP13.24□□□□□ -0.29
AC055716.2-201ENST00000552545 MAPKBP1O60336 1514 aa13.23□□□□□ -0.29
AC055716.2-201ENST00000552545 MYO5CQ9NQX4 1742 aa13.23□□□□□ -0.29
AC055716.2-201ENST00000552545 PTPN23Q9H3S7 1636 aa13.23□□□□□ -0.29
AC055716.2-201ENST00000552545 ZNF644Q9H582 1327 aaPredicted RBP13.22□□□□□ -0.29
AC055716.2-201ENST00000552545 MYT1Q01538 1121 aa13.21□□□□□ -0.29
AC055716.2-201ENST00000552545 CDC42BPBQ9Y5S2 1711 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms