RNA–Protein interactions for RNA: ENST00000552483.5

CNOT2-239, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 5

Gene CNOT2, Length 895 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-239ENST00000552483 ARAP1Q96P48 1450 aa18.4■□□□□ 0.54
CNOT2-239ENST00000552483 RAPGEF2Q9Y4G8 1499 aa18.35■□□□□ 0.53
CNOT2-239ENST00000552483 PRXQ9BXM0 1461 aa18.33■□□□□ 0.52
CNOT2-239ENST00000552483 KIAA0586Q9BVV6 1533 aa18.32■□□□□ 0.52
CNOT2-239ENST00000552483 EEA1Q15075 1411 aa18.27■□□□□ 0.52
CNOT2-239ENST00000552483 PRG4Q92954 1404 aaPredicted RBP18.27■□□□□ 0.52
CNOT2-239ENST00000552483 CYB5RLQ6IPT4 315 aa18.27■□□□□ 0.52
CNOT2-239ENST00000552483 CTTNBP2Q8WZ74 1663 aa18.27■□□□□ 0.52
CNOT2-239ENST00000552483 IQGAP2Q13576 1575 aa18.26■□□□□ 0.51
CNOT2-239ENST00000552483 FAM9AQ8IZU1 332 aaPredicted RBP18.26■□□□□ 0.51
CNOT2-239ENST00000552483 JPH4Q96JJ6 628 aa18.26■□□□□ 0.51
CNOT2-239ENST00000552483 CSRNP3Q8WYN3 585 aa18.25■□□□□ 0.51
CNOT2-239ENST00000552483 KIF21BO75037 1637 aa18.18■□□□□ 0.5
CNOT2-239ENST00000552483 UGGT2Q9NYU1 1516 aa18.16■□□□□ 0.5
CNOT2-239ENST00000552483 DISP1Q96F81 1524 aa18.15■□□□□ 0.5
CNOT2-239ENST00000552483 KIAA0556O60303 1618 aa18.12■□□□□ 0.49
CNOT2-239ENST00000552483 ADCY10Q96PN6 1610 aa18.07■□□□□ 0.48
CNOT2-239ENST00000552483 CARMIL2Q6F5E8 1435 aa18.06■□□□□ 0.48
CNOT2-239ENST00000552483 TNIKQ9UKE5 1360 aa18.04■□□□□ 0.48
CNOT2-239ENST00000552483 EHMT2Q96KQ7 1210 aa18.04■□□□□ 0.48
CNOT2-239ENST00000552483 TTBK1Q5TCY1 1321 aaPredicted RBP18.02■□□□□ 0.48
CNOT2-239ENST00000552483 GOLGA3Q08378 1498 aa18.02■□□□□ 0.48
CNOT2-239ENST00000552483 PTPRGP23470 1445 aa18.02■□□□□ 0.48
CNOT2-239ENST00000552483 SAMD9Q5K651 1589 aa18.02■□□□□ 0.48
CNOT2-239ENST00000552483 ABCC2Q92887 1545 aa17.93■□□□□ 0.46
CNOT2-239ENST00000552483 RANGAP1P46060 587 aaPredicted RBP17.93■□□□□ 0.46
CNOT2-239ENST00000552483 P3H3Q8IVL6 736 aa17.93■□□□□ 0.46
CNOT2-239ENST00000552483 UACAQ9BZF9 1416 aa17.92■□□□□ 0.46
CNOT2-239ENST00000552483 UHRF1BP1LA0JNW5 1464 aa17.92■□□□□ 0.46
CNOT2-239ENST00000552483 ABCA8O94911 1581 aa17.91■□□□□ 0.46
CNOT2-239ENST00000552483 PLB1Q6P1J6 1458 aa17.91■□□□□ 0.46
CNOT2-239ENST00000552483 UBTFP17480 764 aaKnown RBP17.91■□□□□ 0.46
CNOT2-239ENST00000552483 FHOD3Q2V2M9 1422 aa17.89■□□□□ 0.46
CNOT2-239ENST00000552483 KIF13AQ9H1H9 1805 aa17.89■□□□□ 0.45
CNOT2-239ENST00000552483 MAPKBP1O60336 1514 aa17.88■□□□□ 0.45
CNOT2-239ENST00000552483 EFCAB5A4FU69 1503 aa17.88■□□□□ 0.45
CNOT2-239ENST00000552483 TRHP20396 242 aaPredicted RBP17.87■□□□□ 0.45
CNOT2-239ENST00000552483 ZCCHC11Q5TAX3 1644 aaKnown RBP17.87■□□□□ 0.45
CNOT2-239ENST00000552483 KDM5BQ9UGL1 1544 aa17.85■□□□□ 0.45
CNOT2-239ENST00000552483 ARHGAP35Q9NRY4 1499 aa17.84■□□□□ 0.45
CNOT2-239ENST00000552483 RAPGEF6Q8TEU7 1601 aa17.82■□□□□ 0.44
CNOT2-239ENST00000552483 DIP2BQ9P265 1576 aa17.82■□□□□ 0.44
CNOT2-239ENST00000552483 NPM1P06748 294 aaKnown RBP eCLIP17.81■□□□□ 0.44
CNOT2-239ENST00000552483 ABCC10Q5T3U5 1492 aa17.79■□□□□ 0.44
CNOT2-239ENST00000552483 ASXL2Q76L83 1435 aa17.78■□□□□ 0.44
CNOT2-239ENST00000552483 NUP153P49790 1475 aaKnown RBP17.75■□□□□ 0.43
CNOT2-239ENST00000552483 ARID3CA6NKF2 412 aa17.74■□□□□ 0.43
CNOT2-239ENST00000552483 ATP10BO94823 1461 aa17.73■□□□□ 0.43
CNOT2-239ENST00000552483 LRRIQ1Q96JM4 1722 aa17.7■□□□□ 0.42
CNOT2-239ENST00000552483 TSPOAP1O95153 1857 aa17.7■□□□□ 0.42
CNOT2-239ENST00000552483 LOC105371045A0A1W2PR82 267 aa17.7■□□□□ 0.42
CNOT2-239ENST00000552483 FAM69CQ0P6D2 419 aa17.7■□□□□ 0.42
CNOT2-239ENST00000552483 CLIP1P30622 1438 aa17.7■□□□□ 0.42
CNOT2-239ENST00000552483 WDR7Q9Y4E6 1490 aa17.69■□□□□ 0.42
CNOT2-239ENST00000552483 EPRSP07814 1512 aaKnown RBP17.69■□□□□ 0.42
CNOT2-239ENST00000552483 GLI2P10070 1586 aa17.69■□□□□ 0.42
CNOT2-239ENST00000552483 PPRC1Q5VV67 1664 aaKnown RBP17.67■□□□□ 0.42
CNOT2-239ENST00000552483 PCF11O94913 1555 aaKnown RBP17.66■□□□□ 0.42
CNOT2-239ENST00000552483 FMN1Q68DA7 1419 aa17.66■□□□□ 0.42
CNOT2-239ENST00000552483 CDK13Q14004 1512 aaKnown RBP17.66■□□□□ 0.42
CNOT2-239ENST00000552483 HECW1Q76N89 1606 aa17.65■□□□□ 0.42
CNOT2-239ENST00000552483 MAP3K4Q9Y6R4 1608 aa17.65■□□□□ 0.42
CNOT2-239ENST00000552483 CEP162Q5TB80 1403 aa17.64■□□□□ 0.42
CNOT2-239ENST00000552483 CFAP43Q8NDM7 1665 aa17.59■□□□□ 0.41
CNOT2-239ENST00000552483 CASKIN1Q8WXD9 1431 aa17.57■□□□□ 0.4
CNOT2-239ENST00000552483 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.57■□□□□ 0.4
CNOT2-239ENST00000552483 HNRNPUL2Q1KMD3 747 aaKnown RBP17.57■□□□□ 0.4
CNOT2-239ENST00000552483 KCNH8Q96L42 1107 aa17.57■□□□□ 0.4
CNOT2-239ENST00000552483 ABCA9Q8IUA7 1624 aa17.55■□□□□ 0.4
CNOT2-239ENST00000552483 ATP1B4Q9UN42 357 aaPredicted RBP17.55■□□□□ 0.4
CNOT2-239ENST00000552483 FYCO1Q9BQS8 1478 aa17.54■□□□□ 0.4
CNOT2-239ENST00000552483 MAGI3Q5TCQ9 1506 aa17.51■□□□□ 0.39
CNOT2-239ENST00000552483 TTC37Q6PGP7 1564 aa17.5■□□□□ 0.39
CNOT2-239ENST00000552483 KDM6BO15054 1643 aa17.5■□□□□ 0.39
CNOT2-239ENST00000552483 KIF14Q15058 1648 aa17.5■□□□□ 0.39
CNOT2-239ENST00000552483 CD109Q6YHK3 1445 aa17.49■□□□□ 0.39
CNOT2-239ENST00000552483 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.49■□□□□ 0.393e-8■■■□□ 17.7
CNOT2-239ENST00000552483 PLEKHD1A6NEE1 506 aa17.48■□□□□ 0.39
CNOT2-239ENST00000552483 CCDC18Q5T9S5 1454 aa17.48■□□□□ 0.39
CNOT2-239ENST00000552483 COL17A1Q9UMD9 1497 aaPredicted RBP17.46■□□□□ 0.39
CNOT2-239ENST00000552483 TEX14Q8IWB6 1497 aa17.45■□□□□ 0.38
CNOT2-239ENST00000552483 TROQ12816 1431 aaPredicted RBP17.45■□□□□ 0.38
CNOT2-239ENST00000552483 VPS8Q8N3P4 1428 aa17.42■□□□□ 0.38
CNOT2-239ENST00000552483 MYO5CQ9NQX4 1742 aa17.4■□□□□ 0.38
CNOT2-239ENST00000552483 CDK11AQ9UQ88 783 aaPredicted RBP17.37■□□□□ 0.37
CNOT2-239ENST00000552483 CDC42BPBQ9Y5S2 1711 aa17.35■□□□□ 0.37
CNOT2-239ENST00000552483 TIAM1Q13009 1591 aa17.35■□□□□ 0.37
CNOT2-239ENST00000552483 CDC42BPAQ5VT25 1732 aa17.35■□□□□ 0.37
CNOT2-239ENST00000552483 NEO1Q92859 1461 aa17.34■□□□□ 0.37
CNOT2-239ENST00000552483 FRMPD1Q5SYB0 1578 aa17.33■□□□□ 0.37
CNOT2-239ENST00000552483 ARAP3Q8WWN8 1544 aa17.33■□□□□ 0.37
CNOT2-239ENST00000552483 PLCH2O75038 1416 aa17.33■□□□□ 0.36
CNOT2-239ENST00000552483 PREX2Q70Z35 1606 aa17.32■□□□□ 0.36
CNOT2-239ENST00000552483 CFAP74Q9C0B2 1584 aa17.32■□□□□ 0.36
CNOT2-239ENST00000552483 EHBP1L1Q8N3D4 1523 aa17.32■□□□□ 0.36
CNOT2-239ENST00000552483 FANCAO15360 1455 aa17.32■□□□□ 0.36
CNOT2-239ENST00000552483 RICTORQ6R327 1708 aa17.3■□□□□ 0.36
CNOT2-239ENST00000552483 AKNAQ7Z591 1439 aa17.29■□□□□ 0.36
CNOT2-239ENST00000552483 MTUS2Q5JR59 1369 aa17.28■□□□□ 0.36
CNOT2-239ENST00000552483 ARHGAP5Q13017 1502 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms