RNA–Protein interactions for RNA: ENST00000551706.1

CDK4-208, Transcript of cyclin dependent kinase 4, humanhuman

TSL 1 (best)

Gene CDK4, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-208ENST00000551706 FAM69CQ0P6D2 419 aa29.29■■■□□ 2.28
CDK4-208ENST00000551706 ABCC10Q5T3U5 1492 aa29.27■■■□□ 2.28
CDK4-208ENST00000551706 PRG4Q92954 1404 aaPredicted RBP29.27■■■□□ 2.28
CDK4-208ENST00000551706 KDM4FA0A1W2PPD8 638 aa29.23■■■□□ 2.27
CDK4-208ENST00000551706 ILDR1Q86SU0 546 aaPredicted RBP29.22■■■□□ 2.27
CDK4-208ENST00000551706 NPM1P06748 294 aaKnown RBP eCLIP29.2■■■□□ 2.26
CDK4-208ENST00000551706 JPH4Q96JJ6 628 aa29.19■■■□□ 2.26
CDK4-208ENST00000551706 CUL7Q14999 1698 aa29.18■■■□□ 2.26
CDK4-208ENST00000551706 MAPKBP1O60336 1514 aa29.16■■■□□ 2.26
CDK4-208ENST00000551706 DIP2BQ9P265 1576 aa29.15■■■□□ 2.26
CDK4-208ENST00000551706 KDM6BO15054 1643 aa29.14■■■□□ 2.26
CDK4-208ENST00000551706 CARMIL1Q5VZK9 1371 aa29.13■■■□□ 2.25
CDK4-208ENST00000551706 RUSC2Q8N2Y8 1516 aa29.11■■■□□ 2.25
CDK4-208ENST00000551706 CHIC1Q5VXU3 224 aa29.11■■■□□ 2.25
CDK4-208ENST00000551706 ADCY10Q96PN6 1610 aa29.04■■■□□ 2.24
CDK4-208ENST00000551706 TSPOAP1O95153 1857 aa29■■■□□ 2.23
CDK4-208ENST00000551706 EEA1Q15075 1411 aa28.98■■■□□ 2.23
CDK4-208ENST00000551706 RAPGEF2Q9Y4G8 1499 aa28.97■■■□□ 2.23
CDK4-208ENST00000551706 KIAA0586Q9BVV6 1533 aa28.91■■■□□ 2.22
CDK4-208ENST00000551706 CSRNP3Q8WYN3 585 aa28.9■■■□□ 2.22
CDK4-208ENST00000551706 PRXQ9BXM0 1461 aa28.89■■■□□ 2.22
CDK4-208ENST00000551706 ADGRL1O94910 1474 aa28.78■■■□□ 2.2
CDK4-208ENST00000551706 FAM9AQ8IZU1 332 aaPredicted RBP28.76■■■□□ 2.19
CDK4-208ENST00000551706 IQGAP2Q13576 1575 aa28.73■■■□□ 2.19
CDK4-208ENST00000551706 PTPRGP23470 1445 aa28.7■■■□□ 2.19
CDK4-208ENST00000551706 PPRC1Q5VV67 1664 aaKnown RBP28.68■■■□□ 2.18
CDK4-208ENST00000551706 HECW2Q9P2P5 1572 aa28.67■■■□□ 2.18
CDK4-208ENST00000551706 ABCC2Q92887 1545 aa28.66■■■□□ 2.18
CDK4-208ENST00000551706 GLI2P10070 1586 aa28.66■■■□□ 2.18
CDK4-208ENST00000551706 ASXL2Q76L83 1435 aa28.65■■■□□ 2.18
CDK4-208ENST00000551706 PLB1Q6P1J6 1458 aa28.65■■■□□ 2.18
CDK4-208ENST00000551706 TTBK1Q5TCY1 1321 aaPredicted RBP28.64■■■□□ 2.17
CDK4-208ENST00000551706 CARMIL2Q6F5E8 1435 aa28.63■■■□□ 2.17
CDK4-208ENST00000551706 CTTNBP2Q8WZ74 1663 aa28.61■■■□□ 2.17
CDK4-208ENST00000551706 UGGT2Q9NYU1 1516 aa28.6■■■□□ 2.17
CDK4-208ENST00000551706 KIF21BO75037 1637 aa28.6■■■□□ 2.17
CDK4-208ENST00000551706 TNIKQ9UKE5 1360 aa28.58■■■□□ 2.17
CDK4-208ENST00000551706 COL17A1Q9UMD9 1497 aaPredicted RBP28.57■■■□□ 2.16
CDK4-208ENST00000551706 DISP1Q96F81 1524 aa28.51■■■□□ 2.15
CDK4-208ENST00000551706 UHRF1BP1LA0JNW5 1464 aa28.5■■■□□ 2.15
CDK4-208ENST00000551706 GOLGA3Q08378 1498 aa28.48■■■□□ 2.15
CDK4-208ENST00000551706 MAP3K4Q9Y6R4 1608 aa28.47■■■□□ 2.15
CDK4-208ENST00000551706 TEX14Q8IWB6 1497 aa28.47■■■□□ 2.15
CDK4-208ENST00000551706 EPRSP07814 1512 aaKnown RBP28.47■■■□□ 2.15
CDK4-208ENST00000551706 UACAQ9BZF9 1416 aa28.45■■■□□ 2.15
CDK4-208ENST00000551706 KIAA0556O60303 1618 aa28.44■■■□□ 2.14
CDK4-208ENST00000551706 UBTFP17480 764 aaKnown RBP28.4■■■□□ 2.14
CDK4-208ENST00000551706 KDM5BQ9UGL1 1544 aa28.38■■■□□ 2.13
CDK4-208ENST00000551706 FBXO41Q8TF61 875 aa28.35■■■□□ 2.13
CDK4-208ENST00000551706 EHMT2Q96KQ7 1210 aa28.34■■■□□ 2.13
CDK4-208ENST00000551706 ZCCHC11Q5TAX3 1644 aaKnown RBP28.32■■■□□ 2.12
CDK4-208ENST00000551706 SAMD9Q5K651 1589 aa28.28■■■□□ 2.12
CDK4-208ENST00000551706 RANGAP1P46060 587 aaPredicted RBP28.24■■■□□ 2.11
CDK4-208ENST00000551706 P3H3Q8IVL6 736 aa28.24■■■□□ 2.11
CDK4-208ENST00000551706 EFCAB5A4FU69 1503 aa28.23■■■□□ 2.11
CDK4-208ENST00000551706 WDR7Q9Y4E6 1490 aa28.22■■■□□ 2.11
CDK4-208ENST00000551706 MAGI3Q5TCQ9 1506 aa28.17■■■□□ 2.1
CDK4-208ENST00000551706 CD109Q6YHK3 1445 aa28.16■■■□□ 2.1
CDK4-208ENST00000551706 CFAP43Q8NDM7 1665 aa28.13■■■□□ 2.09
CDK4-208ENST00000551706 ABCA8O94911 1581 aa28.13■■■□□ 2.09
CDK4-208ENST00000551706 FHOD3Q2V2M9 1422 aa28.13■■■□□ 2.09
CDK4-208ENST00000551706 KCNH8Q96L42 1107 aa28.07■■■□□ 2.08
CDK4-208ENST00000551706 ARHGAP35Q9NRY4 1499 aa28.07■■■□□ 2.08
CDK4-208ENST00000551706 PTPRMP28827 1452 aa28■■■□□ 2.07
CDK4-208ENST00000551706 FMN1Q68DA7 1419 aa28■■■□□ 2.07
CDK4-208ENST00000551706 RAPGEF6Q8TEU7 1601 aa28■■■□□ 2.07
CDK4-208ENST00000551706 ARAP3Q8WWN8 1544 aa27.97■■■□□ 2.07
CDK4-208ENST00000551706 CLIP1P30622 1438 aa27.95■■■□□ 2.07
CDK4-208ENST00000551706 ADAMTSL3P82987 1691 aa27.95■■■□□ 2.07
CDK4-208ENST00000551706 ATP10BO94823 1461 aa27.92■■■□□ 2.06
CDK4-208ENST00000551706 NUP153P49790 1475 aaKnown RBP27.91■■■□□ 2.06
CDK4-208ENST00000551706 LOC105371045A0A1W2PR82 267 aa27.88■■■□□ 2.05
CDK4-208ENST00000551706 ARID3CA6NKF2 412 aa27.88■■■□□ 2.05
CDK4-208ENST00000551706 PCF11O94913 1555 aaKnown RBP27.88■■■□□ 2.05
CDK4-208ENST00000551706 LMTK3Q96Q04 1460 aa27.84■■■□□ 2.05
CDK4-208ENST00000551706 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.84■■■□□ 2.05
CDK4-208ENST00000551706 HNRNPUL2Q1KMD3 747 aaKnown RBP27.84■■■□□ 2.05
CDK4-208ENST00000551706 PHLDB1Q86UU1 1377 aa27.84■■■□□ 2.05
CDK4-208ENST00000551706 CEP162Q5TB80 1403 aa27.84■■■□□ 2.05
CDK4-208ENST00000551706 BCORL1Q5H9F3 1711 aa27.81■■■□□ 2.04
CDK4-208ENST00000551706 HECW1Q76N89 1606 aa27.8■■■□□ 2.04
CDK4-208ENST00000551706 MADDQ8WXG6 1647 aa27.79■■■□□ 2.04
CDK4-208ENST00000551706 ATP1B4Q9UN42 357 aaPredicted RBP27.79■■■□□ 2.04
CDK4-208ENST00000551706 RAPGEF3O95398 923 aa27.78■■■□□ 2.04
CDK4-208ENST00000551706 ARID4BQ4LE39 1312 aaPredicted RBP27.77■■■□□ 2.04
CDK4-208ENST00000551706 CASKIN1Q8WXD9 1431 aa27.75■■■□□ 2.03
CDK4-208ENST00000551706 ABCA9Q8IUA7 1624 aa27.75■■■□□ 2.03
CDK4-208ENST00000551706 PLEKHD1A6NEE1 506 aa27.74■■■□□ 2.03
CDK4-208ENST00000551706 NEO1Q92859 1461 aa27.71■■■□□ 2.03
CDK4-208ENST00000551706 FYCO1Q9BQS8 1478 aa27.7■■■□□ 2.02
CDK4-208ENST00000551706 CDK13Q14004 1512 aaKnown RBP27.69■■■□□ 2.02
CDK4-208ENST00000551706 CDK11AQ9UQ88 783 aaPredicted RBP27.69■■■□□ 2.02
CDK4-208ENST00000551706 FRMPD1Q5SYB0 1578 aa27.67■■■□□ 2.02
CDK4-208ENST00000551706 RIMS1Q86UR5 1692 aaKnown RBP27.66■■■□□ 2.02
CDK4-208ENST00000551706 HSPA2P54652 639 aa27.66■■■□□ 2.02
CDK4-208ENST00000551706 CCDC18Q5T9S5 1454 aa27.65■■■□□ 2.02
CDK4-208ENST00000551706 CERKQ8TCT0 537 aa27.65■■■□□ 2.02
CDK4-208ENST00000551706 ARHGEF40Q8TER5 1519 aa27.58■■■□□ 2.01
CDK4-208ENST00000551706 PLPPR3Q6T4P5 718 aa27.56■■■□□ 2
CDK4-208ENST00000551706 SOCS7O14512 581 aa27.54■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms