RNA–Protein interactions for RNA: ENST00000551567.1

TROAP-216, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 3

Gene TROAP, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-216ENST00000551567 PRG4Q92954 1404 aaPredicted RBP40.1■■■■■ 4.01
TROAP-216ENST00000551567 JPH4Q96JJ6 628 aa40.05■■■■■ 4
TROAP-216ENST00000551567 KIAA0586Q9BVV6 1533 aa39.92■■■■□ 3.98
TROAP-216ENST00000551567 CARMIL1Q5VZK9 1371 aa39.88■■■■□ 3.97
TROAP-216ENST00000551567 ADCY10Q96PN6 1610 aa39.67■■■■□ 3.94
TROAP-216ENST00000551567 KIF13AQ9H1H9 1805 aa39.65■■■■□ 3.94
TROAP-216ENST00000551567 IQGAP2Q13576 1575 aa39.65■■■■□ 3.94
TROAP-216ENST00000551567 RAPGEF2Q9Y4G8 1499 aa39.57■■■■□ 3.93
TROAP-216ENST00000551567 NPM1P06748 294 aaKnown RBP eCLIP39.54■■■■□ 3.92
TROAP-216ENST00000551567 MAPKBP1O60336 1514 aa39.52■■■■□ 3.92
TROAP-216ENST00000551567 CARMIL2Q6F5E8 1435 aa39.52■■■■□ 3.92
TROAP-216ENST00000551567 PTPRGP23470 1445 aa39.49■■■■□ 3.91
TROAP-216ENST00000551567 TTBK1Q5TCY1 1321 aaPredicted RBP39.49■■■■□ 3.91
TROAP-216ENST00000551567 TNIKQ9UKE5 1360 aa39.45■■■■□ 3.91
TROAP-216ENST00000551567 ABCC10Q5T3U5 1492 aa39.43■■■■□ 3.9
TROAP-216ENST00000551567 DISP1Q96F81 1524 aa39.4■■■■□ 3.9
TROAP-216ENST00000551567 DIP2BQ9P265 1576 aa39.4■■■■□ 3.9
TROAP-216ENST00000551567 UGGT2Q9NYU1 1516 aa39.36■■■■□ 3.89
TROAP-216ENST00000551567 CTTNBP2Q8WZ74 1663 aa39.36■■■■□ 3.89
TROAP-216ENST00000551567 FAM69CQ0P6D2 419 aa39.36■■■■□ 3.89
TROAP-216ENST00000551567 KIAA0556O60303 1618 aa39.29■■■■□ 3.88
TROAP-216ENST00000551567 ABCC2Q92887 1545 aa39.28■■■■□ 3.88
TROAP-216ENST00000551567 PRXQ9BXM0 1461 aa39.22■■■■□ 3.87
TROAP-216ENST00000551567 UHRF1BP1LA0JNW5 1464 aa39.21■■■■□ 3.87
TROAP-216ENST00000551567 UACAQ9BZF9 1416 aa39.21■■■■□ 3.87
TROAP-216ENST00000551567 TSPOAP1O95153 1857 aa39.17■■■■□ 3.86
TROAP-216ENST00000551567 ASXL2Q76L83 1435 aa39.12■■■■□ 3.85
TROAP-216ENST00000551567 PLB1Q6P1J6 1458 aa39.07■■■■□ 3.85
TROAP-216ENST00000551567 GOLGA3Q08378 1498 aa39.05■■■■□ 3.84
TROAP-216ENST00000551567 ZCCHC11Q5TAX3 1644 aaKnown RBP39.05■■■■□ 3.84
TROAP-216ENST00000551567 KDM5BQ9UGL1 1544 aa39.04■■■■□ 3.84
TROAP-216ENST00000551567 KDM6BO15054 1643 aa39■■■■□ 3.83
TROAP-216ENST00000551567 GLI2P10070 1586 aa38.97■■■■□ 3.83
TROAP-216ENST00000551567 AEBP2Q6ZN18 517 aaPredicted RBP38.96■■■■□ 3.83
TROAP-216ENST00000551567 CSRNP3Q8WYN3 585 aa38.95■■■■□ 3.83
TROAP-216ENST00000551567 PPRC1Q5VV67 1664 aaKnown RBP38.91■■■■□ 3.82
TROAP-216ENST00000551567 ABCA8O94911 1581 aa38.88■■■■□ 3.81
TROAP-216ENST00000551567 EPRSP07814 1512 aaKnown RBP38.88■■■■□ 3.81
TROAP-216ENST00000551567 EEA1Q15075 1411 aa38.86■■■■□ 3.81
TROAP-216ENST00000551567 MAP3K4Q9Y6R4 1608 aa38.81■■■■□ 3.8
TROAP-216ENST00000551567 WDR7Q9Y4E6 1490 aa38.79■■■■□ 3.8
TROAP-216ENST00000551567 P3H3Q8IVL6 736 aa38.76■■■■□ 3.8
TROAP-216ENST00000551567 FAM9AQ8IZU1 332 aaPredicted RBP38.75■■■■□ 3.79
TROAP-216ENST00000551567 SAMD9Q5K651 1589 aa38.74■■■■□ 3.79
TROAP-216ENST00000551567 TEX14Q8IWB6 1497 aa38.64■■■■□ 3.78
TROAP-216ENST00000551567 KIF21BO75037 1637 aa38.62■■■■□ 3.77
TROAP-216ENST00000551567 ARID3CA6NKF2 412 aa38.6■■■■□ 3.77
TROAP-216ENST00000551567 RANGAP1P46060 587 aaPredicted RBP38.59■■■■□ 3.77
TROAP-216ENST00000551567 CFAP43Q8NDM7 1665 aa38.58■■■■□ 3.77
TROAP-216ENST00000551567 KCNH8Q96L42 1107 aa38.57■■■■□ 3.76
TROAP-216ENST00000551567 RAPGEF6Q8TEU7 1601 aa38.56■■■■□ 3.76
TROAP-216ENST00000551567 COL17A1Q9UMD9 1497 aaPredicted RBP38.55■■■■□ 3.76
TROAP-216ENST00000551567 ATP10BO94823 1461 aa38.53■■■■□ 3.76
TROAP-216ENST00000551567 CHIC1Q5VXU3 224 aa38.5■■■■□ 3.75
TROAP-216ENST00000551567 CD109Q6YHK3 1445 aa38.49■■■■□ 3.75
TROAP-216ENST00000551567 FHOD3Q2V2M9 1422 aa38.48■■■■□ 3.75
TROAP-216ENST00000551567 MAGI3Q5TCQ9 1506 aa38.45■■■■□ 3.75
TROAP-216ENST00000551567 EFCAB5A4FU69 1503 aa38.39■■■■□ 3.74
TROAP-216ENST00000551567 KDM4FA0A1W2PPD8 638 aa38.38■■■■□ 3.73
TROAP-216ENST00000551567 EHMT2Q96KQ7 1210 aa38.38■■■■□ 3.73
TROAP-216ENST00000551567 NUP153P49790 1475 aaKnown RBP38.38■■■■□ 3.73
TROAP-216ENST00000551567 ABCA9Q8IUA7 1624 aa38.32■■■■□ 3.73
TROAP-216ENST00000551567 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP38.32■■■■□ 3.72
TROAP-216ENST00000551567 HNRNPUL2Q1KMD3 747 aaKnown RBP38.32■■■■□ 3.72
TROAP-216ENST00000551567 UBTFP17480 764 aaKnown RBP38.26■■■■□ 3.72
TROAP-216ENST00000551567 ADGRL1O94910 1474 aa38.23■■■■□ 3.71
TROAP-216ENST00000551567 ARAP3Q8WWN8 1544 aa38.15■■■■□ 3.7
TROAP-216ENST00000551567 ARHGAP35Q9NRY4 1499 aa38.09■■■■□ 3.69
TROAP-216ENST00000551567 CDK13Q14004 1512 aaKnown RBP38.07■■■■□ 3.69
TROAP-216ENST00000551567 PLEKHD1A6NEE1 506 aa38.07■■■■□ 3.68
TROAP-216ENST00000551567 NEO1Q92859 1461 aa38.04■■■■□ 3.68
TROAP-216ENST00000551567 PHLDB1Q86UU1 1377 aa38.03■■■■□ 3.68
TROAP-216ENST00000551567 FMN1Q68DA7 1419 aa38.01■■■■□ 3.68
TROAP-216ENST00000551567 HECW1Q76N89 1606 aa38.01■■■■□ 3.67
TROAP-216ENST00000551567 TTC37Q6PGP7 1564 aa37.98■■■■□ 3.67
TROAP-216ENST00000551567 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP37.98■■■■□ 3.67
TROAP-216ENST00000551567 ATP1B4Q9UN42 357 aaPredicted RBP37.94■■■■□ 3.66
TROAP-216ENST00000551567 FRMPD1Q5SYB0 1578 aa37.93■■■■□ 3.66
TROAP-216ENST00000551567 RAPGEF3O95398 923 aa37.93■■■■□ 3.66
TROAP-216ENST00000551567 CFAP74Q9C0B2 1584 aa37.89■■■■□ 3.66
TROAP-216ENST00000551567 FANCAO15360 1455 aa37.86■■■■□ 3.65
TROAP-216ENST00000551567 LRRIQ1Q96JM4 1722 aa37.83■■■■□ 3.65
TROAP-216ENST00000551567 AKNAQ7Z591 1439 aa37.82■■■■□ 3.64
TROAP-216ENST00000551567 RICTORQ6R327 1708 aa37.81■■■■□ 3.64
TROAP-216ENST00000551567 DENND4BO75064 1496 aaPredicted RBP37.78■■■■□ 3.64
TROAP-216ENST00000551567 KIF14Q15058 1648 aa37.75■■■■□ 3.63
TROAP-216ENST00000551567 PCF11O94913 1555 aaKnown RBP37.74■■■■□ 3.63
TROAP-216ENST00000551567 MYO5CQ9NQX4 1742 aa37.73■■■■□ 3.63
TROAP-216ENST00000551567 ARHGEF40Q8TER5 1519 aa37.72■■■■□ 3.63
TROAP-216ENST00000551567 CDK11AQ9UQ88 783 aaPredicted RBP37.72■■■■□ 3.63
TROAP-216ENST00000551567 PLCH2O75038 1416 aa37.7■■■■□ 3.62
TROAP-216ENST00000551567 TROQ12816 1431 aaPredicted RBP37.67■■■■□ 3.62
TROAP-216ENST00000551567 ADAMTSL3P82987 1691 aa37.65■■■■□ 3.62
TROAP-216ENST00000551567 HECW2Q9P2P5 1572 aa37.64■■■■□ 3.62
TROAP-216ENST00000551567 CASKIN1Q8WXD9 1431 aa37.64■■■■□ 3.62
TROAP-216ENST00000551567 ZMYM4Q5VZL5 1548 aa37.64■■■■□ 3.62
TROAP-216ENST00000551567 CLIP1P30622 1438 aa37.62■■■■□ 3.61
TROAP-216ENST00000551567 BCORL1Q5H9F3 1711 aa37.62■■■■□ 3.61
TROAP-216ENST00000551567 ARID4BQ4LE39 1312 aaPredicted RBP37.6■■■■□ 3.61
TROAP-216ENST00000551567 CCDC18Q5T9S5 1454 aa37.59■■■■□ 3.61
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms