RNA–Protein interactions for RNA: ENST00000551549.1

GCN1-208, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 2

Gene GCN1, Length 258 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-208ENST00000551549 CARMIL1Q5VZK9 1371 aa16.77■□□□□ 0.28
GCN1-208ENST00000551549 RUSC2Q8N2Y8 1516 aa16.77■□□□□ 0.28
GCN1-208ENST00000551549 KIAA0586Q9BVV6 1533 aa16.75■□□□□ 0.27
GCN1-208ENST00000551549 CUL7Q14999 1698 aa16.75■□□□□ 0.27
GCN1-208ENST00000551549 TTBK1Q5TCY1 1321 aaPredicted RBP16.63■□□□□ 0.25
GCN1-208ENST00000551549 NPM1P06748 294 aaKnown RBP eCLIP16.62■□□□□ 0.25
GCN1-208ENST00000551549 RAPGEF2Q9Y4G8 1499 aa16.61■□□□□ 0.25
GCN1-208ENST00000551549 PTPRGP23470 1445 aa16.6■□□□□ 0.25
GCN1-208ENST00000551549 CARMIL2Q6F5E8 1435 aa16.58■□□□□ 0.24
GCN1-208ENST00000551549 ADCY10Q96PN6 1610 aa16.58■□□□□ 0.24
GCN1-208ENST00000551549 IQGAP2Q13576 1575 aa16.57■□□□□ 0.24
GCN1-208ENST00000551549 TNIKQ9UKE5 1360 aa16.57■□□□□ 0.24
GCN1-208ENST00000551549 FAM69CQ0P6D2 419 aa16.56■□□□□ 0.24
GCN1-208ENST00000551549 DISP1Q96F81 1524 aa16.53■□□□□ 0.24
GCN1-208ENST00000551549 ABCC10Q5T3U5 1492 aa16.52■□□□□ 0.23
GCN1-208ENST00000551549 MAPKBP1O60336 1514 aa16.51■□□□□ 0.23
GCN1-208ENST00000551549 UGGT2Q9NYU1 1516 aa16.5■□□□□ 0.23
GCN1-208ENST00000551549 PRXQ9BXM0 1461 aa16.49■□□□□ 0.23
GCN1-208ENST00000551549 KIF13AQ9H1H9 1805 aa16.49■□□□□ 0.23
GCN1-208ENST00000551549 UACAQ9BZF9 1416 aa16.46■□□□□ 0.23
GCN1-208ENST00000551549 ABCC2Q92887 1545 aa16.45■□□□□ 0.22
GCN1-208ENST00000551549 DIP2BQ9P265 1576 aa16.45■□□□□ 0.22
GCN1-208ENST00000551549 UHRF1BP1LA0JNW5 1464 aa16.44■□□□□ 0.22
GCN1-208ENST00000551549 CSRNP3Q8WYN3 585 aa16.44■□□□□ 0.22
GCN1-208ENST00000551549 KIAA0556O60303 1618 aa16.42■□□□□ 0.22
GCN1-208ENST00000551549 ASXL2Q76L83 1435 aa16.41■□□□□ 0.22
GCN1-208ENST00000551549 PLB1Q6P1J6 1458 aa16.38■□□□□ 0.21
GCN1-208ENST00000551549 GOLGA3Q08378 1498 aa16.37■□□□□ 0.21
GCN1-208ENST00000551549 CTTNBP2Q8WZ74 1663 aa16.37■□□□□ 0.21
GCN1-208ENST00000551549 KDM5BQ9UGL1 1544 aa16.36■□□□□ 0.21
GCN1-208ENST00000551549 FAM9AQ8IZU1 332 aaPredicted RBP16.36■□□□□ 0.21
GCN1-208ENST00000551549 P3H3Q8IVL6 736 aa16.34■□□□□ 0.21
GCN1-208ENST00000551549 EEA1Q15075 1411 aa16.32■□□□□ 0.2
GCN1-208ENST00000551549 AEBP2Q6ZN18 517 aaPredicted RBP16.32■□□□□ 0.2
GCN1-208ENST00000551549 TSPOAP1O95153 1857 aa16.31■□□□□ 0.2
GCN1-208ENST00000551549 EPRSP07814 1512 aaKnown RBP16.3■□□□□ 0.2
GCN1-208ENST00000551549 ZCCHC11Q5TAX3 1644 aaKnown RBP16.3■□□□□ 0.2
GCN1-208ENST00000551549 GLI2P10070 1586 aa16.3■□□□□ 0.2
GCN1-208ENST00000551549 CHIC1Q5VXU3 224 aa16.29■□□□□ 0.2
GCN1-208ENST00000551549 RANGAP1P46060 587 aaPredicted RBP16.28■□□□□ 0.2
GCN1-208ENST00000551549 ABCA8O94911 1581 aa16.28■□□□□ 0.2
GCN1-208ENST00000551549 ARID3CA6NKF2 412 aa16.26■□□□□ 0.19
GCN1-208ENST00000551549 WDR7Q9Y4E6 1490 aa16.25■□□□□ 0.19
GCN1-208ENST00000551549 KCNH8Q96L42 1107 aa16.25■□□□□ 0.19
GCN1-208ENST00000551549 KDM6BO15054 1643 aa16.25■□□□□ 0.19
GCN1-208ENST00000551549 PPRC1Q5VV67 1664 aaKnown RBP16.22■□□□□ 0.19
GCN1-208ENST00000551549 EHMT2Q96KQ7 1210 aa16.21■□□□□ 0.19
GCN1-208ENST00000551549 SAMD9Q5K651 1589 aa16.21■□□□□ 0.18
GCN1-208ENST00000551549 ATP10BO94823 1461 aa16.19■□□□□ 0.18
GCN1-208ENST00000551549 COL17A1Q9UMD9 1497 aaPredicted RBP16.19■□□□□ 0.18
GCN1-208ENST00000551549 MAP3K4Q9Y6R4 1608 aa16.19■□□□□ 0.18
GCN1-208ENST00000551549 FHOD3Q2V2M9 1422 aa16.18■□□□□ 0.18
GCN1-208ENST00000551549 CD109Q6YHK3 1445 aa16.16■□□□□ 0.18
GCN1-208ENST00000551549 TEX14Q8IWB6 1497 aa16.16■□□□□ 0.18
GCN1-208ENST00000551549 KIF21BO75037 1637 aa16.16■□□□□ 0.18
GCN1-208ENST00000551549 KDM4FA0A1W2PPD8 638 aa16.15■□□□□ 0.18
GCN1-208ENST00000551549 UBTFP17480 764 aaKnown RBP16.14■□□□□ 0.17
GCN1-208ENST00000551549 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.13■□□□□ 0.17
GCN1-208ENST00000551549 HNRNPUL2Q1KMD3 747 aaKnown RBP16.13■□□□□ 0.17
GCN1-208ENST00000551549 MAGI3Q5TCQ9 1506 aa16.11■□□□□ 0.17
GCN1-208ENST00000551549 RAPGEF6Q8TEU7 1601 aa16.11■□□□□ 0.17
GCN1-208ENST00000551549 NUP153P49790 1475 aaKnown RBP16.1■□□□□ 0.17
GCN1-208ENST00000551549 EFCAB5A4FU69 1503 aa16.07■□□□□ 0.16
GCN1-208ENST00000551549 CFAP43Q8NDM7 1665 aa16.07■□□□□ 0.16
GCN1-208ENST00000551549 PLEKHD1A6NEE1 506 aa16.03■□□□□ 0.16
GCN1-208ENST00000551549 ABCA9Q8IUA7 1624 aa16.01■□□□□ 0.15
GCN1-208ENST00000551549 ARHGAP35Q9NRY4 1499 aa16■□□□□ 0.15
GCN1-208ENST00000551549 ATP1B4Q9UN42 357 aaPredicted RBP16■□□□□ 0.15
GCN1-208ENST00000551549 ARAP3Q8WWN8 1544 aa15.99■□□□□ 0.15
GCN1-208ENST00000551549 ADGRL1O94910 1474 aa15.98■□□□□ 0.15
GCN1-208ENST00000551549 RAPGEF3O95398 923 aa15.97■□□□□ 0.15
GCN1-208ENST00000551549 PHLDB1Q86UU1 1377 aa15.97■□□□□ 0.15
GCN1-208ENST00000551549 CDK13Q14004 1512 aaKnown RBP15.96■□□□□ 0.15
GCN1-208ENST00000551549 FMN1Q68DA7 1419 aa15.95■□□□□ 0.14
GCN1-208ENST00000551549 NEO1Q92859 1461 aa15.94■□□□□ 0.14
GCN1-208ENST00000551549 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.91■□□□□ 0.14
GCN1-208ENST00000551549 AKNAQ7Z591 1439 aa15.88■□□□□ 0.13
GCN1-208ENST00000551549 TTC37Q6PGP7 1564 aa15.87■□□□□ 0.13
GCN1-208ENST00000551549 HECW1Q76N89 1606 aa15.87■□□□□ 0.13
GCN1-208ENST00000551549 FANCAO15360 1455 aa15.87■□□□□ 0.13
GCN1-208ENST00000551549 CDK11AQ9UQ88 783 aaPredicted RBP15.87■□□□□ 0.13
GCN1-208ENST00000551549 DENND4BO75064 1496 aaPredicted RBP15.84■□□□□ 0.13
GCN1-208ENST00000551549 FRMPD1Q5SYB0 1578 aa15.84■□□□□ 0.13
GCN1-208ENST00000551549 PLCH2O75038 1416 aa15.84■□□□□ 0.13
GCN1-208ENST00000551549 TROQ12816 1431 aaPredicted RBP15.82■□□□□ 0.12
GCN1-208ENST00000551549 CASKIN1Q8WXD9 1431 aa15.82■□□□□ 0.12
GCN1-208ENST00000551549 CLIP1P30622 1438 aa15.81■□□□□ 0.12
GCN1-208ENST00000551549 ARID4BQ4LE39 1312 aaPredicted RBP15.8■□□□□ 0.12
GCN1-208ENST00000551549 EFCAB2Q5VUJ9 269 aa15.8■□□□□ 0.12
GCN1-208ENST00000551549 SCAPERQ9BY12 1400 aa15.79■□□□□ 0.12
GCN1-208ENST00000551549 KIF14Q15058 1648 aa15.79■□□□□ 0.12
GCN1-208ENST00000551549 CFAP74Q9C0B2 1584 aa15.79■□□□□ 0.12
GCN1-208ENST00000551549 PCF11O94913 1555 aaKnown RBP15.78■□□□□ 0.12
GCN1-208ENST00000551549 RICTORQ6R327 1708 aa15.77■□□□□ 0.11
GCN1-208ENST00000551549 LRRIQ1Q96JM4 1722 aa15.76■□□□□ 0.11
GCN1-208ENST00000551549 YEATS2Q9ULM3 1422 aa15.76■□□□□ 0.11
GCN1-208ENST00000551549 CCDC18Q5T9S5 1454 aa15.75■□□□□ 0.11
GCN1-208ENST00000551549 POGZQ7Z3K3 1410 aa15.75■□□□□ 0.11
GCN1-208ENST00000551549 ARHGEF40Q8TER5 1519 aa15.73■□□□□ 0.11
GCN1-208ENST00000551549 FYCO1Q9BQS8 1478 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 125.6 ms