RNA–Protein interactions for RNA: ENST00000551261.5

LETMD1-229, Transcript of LETM1 domain containing 1, humanhuman

TSL 5

Gene LETMD1, Length 521 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-229ENST00000551261 IQGAP2Q13576 1575 aa22.5■■□□□ 1.19
LETMD1-229ENST00000551261 VPS8Q8N3P4 1428 aa22.48■■□□□ 1.19
LETMD1-229ENST00000551261 KIAA0586Q9BVV6 1533 aa22.47■■□□□ 1.19
LETMD1-229ENST00000551261 ARHGAP35Q9NRY4 1499 aa22.46■■□□□ 1.19
LETMD1-229ENST00000551261 NUP160Q12769 1436 aa22.44■■□□□ 1.18
LETMD1-229ENST00000551261 SAMD9Q5K651 1589 aa22.44■■□□□ 1.18
LETMD1-229ENST00000551261 CHMP7Q8WUX9 453 aaPredicted RBP22.44■■□□□ 1.18
LETMD1-229ENST00000551261 ARAP1Q96P48 1450 aa22.42■■□□□ 1.18
LETMD1-229ENST00000551261 UGGT2Q9NYU1 1516 aa22.4■■□□□ 1.18
LETMD1-229ENST00000551261 CEP170Q5SW79 1584 aa22.38■■□□□ 1.17
LETMD1-229ENST00000551261 CHD1O14646 1710 aa22.35■■□□□ 1.17
LETMD1-229ENST00000551261 FMN1Q68DA7 1419 aa22.31■■□□□ 1.16
LETMD1-229ENST00000551261 FBLN2P98095 1184 aa22.27■■□□□ 1.16
LETMD1-229ENST00000551261 KIAA0556O60303 1618 aa22.26■■□□□ 1.15
LETMD1-229ENST00000551261 RANGAP1P46060 587 aaPredicted RBP22.25■■□□□ 1.15
LETMD1-229ENST00000551261 FYCO1Q9BQS8 1478 aa22.25■■□□□ 1.15
LETMD1-229ENST00000551261 MAP3K1Q13233 1512 aa22.24■■□□□ 1.15
LETMD1-229ENST00000551261 FHOD3Q2V2M9 1422 aa22.23■■□□□ 1.15
LETMD1-229ENST00000551261 CARMIL2Q6F5E8 1435 aa22.23■■□□□ 1.15
LETMD1-229ENST00000551261 APLP2Q06481 763 aa22.2■■□□□ 1.14
LETMD1-229ENST00000551261 CASKIN1Q8WXD9 1431 aa22.2■■□□□ 1.14
LETMD1-229ENST00000551261 DISP1Q96F81 1524 aa22.2■■□□□ 1.14
LETMD1-229ENST00000551261 SHROOM2Q13796 1616 aa22.2■■□□□ 1.14
LETMD1-229ENST00000551261 PCF11O94913 1555 aaKnown RBP22.17■■□□□ 1.14
LETMD1-229ENST00000551261 CLASP1Q7Z460 1538 aa22.17■■□□□ 1.14
LETMD1-229ENST00000551261 CFAP43Q8NDM7 1665 aa22.13■■□□□ 1.13
LETMD1-229ENST00000551261 HECW1Q76N89 1606 aa22.12■■□□□ 1.13
LETMD1-229ENST00000551261 JPH4Q96JJ6 628 aa22.11■■□□□ 1.13
LETMD1-229ENST00000551261 TIAM1Q13009 1591 aa22.1■■□□□ 1.13
LETMD1-229ENST00000551261 CCDC18Q5T9S5 1454 aa22.09■■□□□ 1.13
LETMD1-229ENST00000551261 P3H3Q8IVL6 736 aa22.06■■□□□ 1.12
LETMD1-229ENST00000551261 PRG4Q92954 1404 aaPredicted RBP22.04■■□□□ 1.12
LETMD1-229ENST00000551261 TRIM26Q12899 539 aaPredicted RBP22.03■■□□□ 1.12
LETMD1-229ENST00000551261 RAPGEF6Q8TEU7 1601 aa22.02■■□□□ 1.11
LETMD1-229ENST00000551261 LRRC9Q6ZRR7 1453 aa21.96■■□□□ 1.11
LETMD1-229ENST00000551261 ABCA8O94911 1581 aa21.94■■□□□ 1.1
LETMD1-229ENST00000551261 EPRSP07814 1512 aaKnown RBP21.93■■□□□ 1.1
LETMD1-229ENST00000551261 OSCARQ8IYS5 282 aa21.93■■□□□ 1.1
LETMD1-229ENST00000551261 EHBP1L1Q8N3D4 1523 aa21.93■■□□□ 1.1
LETMD1-229ENST00000551261 PTPRGP23470 1445 aa21.91■■□□□ 1.1
LETMD1-229ENST00000551261 LRRIQ1Q96JM4 1722 aa21.9■■□□□ 1.1
LETMD1-229ENST00000551261 NUP153P49790 1475 aaKnown RBP21.9■■□□□ 1.1
LETMD1-229ENST00000551261 PLB1Q6P1J6 1458 aa21.85■■□□□ 1.09
LETMD1-229ENST00000551261 MTUS2Q5JR59 1369 aa21.85■■□□□ 1.09
LETMD1-229ENST00000551261 ATP1B4Q9UN42 357 aaPredicted RBP21.84■■□□□ 1.09
LETMD1-229ENST00000551261 SUPT6HQ7KZ85 1726 aaKnown RBP21.83■■□□□ 1.08
LETMD1-229ENST00000551261 UACAQ9BZF9 1416 aa21.82■■□□□ 1.08
LETMD1-229ENST00000551261 UHRF1BP1LA0JNW5 1464 aa21.82■■□□□ 1.08
LETMD1-229ENST00000551261 ABCC2Q92887 1545 aa21.81■■□□□ 1.08
LETMD1-229ENST00000551261 KANK4Q5T7N3 995 aaPredicted RBP21.81■■□□□ 1.08
LETMD1-229ENST00000551261 CDK11AQ9UQ88 783 aaPredicted RBP21.81■■□□□ 1.08
LETMD1-229ENST00000551261 ERCC6L2Q5T890 1561 aa21.81■■□□□ 1.08
LETMD1-229ENST00000551261 PPARGC1BQ86YN6 1023 aaKnown RBP21.79■■□□□ 1.08
LETMD1-229ENST00000551261 CDK13Q14004 1512 aaKnown RBP21.79■■□□□ 1.08
LETMD1-229ENST00000551261 PCGF6Q9BYE7 350 aa21.78■■□□□ 1.08
LETMD1-229ENST00000551261 RRBP1Q9P2E9 1410 aaKnown RBP21.78■■□□□ 1.08
LETMD1-229ENST00000551261 ARHGEF11O15085 1522 aa21.75■■□□□ 1.07
LETMD1-229ENST00000551261 ADCY10Q96PN6 1610 aa21.73■■□□□ 1.07
LETMD1-229ENST00000551261 TROQ12816 1431 aaPredicted RBP21.72■■□□□ 1.07
LETMD1-229ENST00000551261 MAGI3Q5TCQ9 1506 aa21.71■■□□□ 1.07
LETMD1-229ENST00000551261 NCOA2Q15596 1464 aa21.71■■□□□ 1.07
LETMD1-229ENST00000551261 TTBK1Q5TCY1 1321 aaPredicted RBP21.69■■□□□ 1.06
LETMD1-229ENST00000551261 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.69■■□□□ 1.06
LETMD1-229ENST00000551261 ATP10BO94823 1461 aa21.69■■□□□ 1.06
LETMD1-229ENST00000551261 CCNB3Q8WWL7 1395 aa21.68■■□□□ 1.06
LETMD1-229ENST00000551261 KDM5BQ9UGL1 1544 aa21.67■■□□□ 1.06
LETMD1-229ENST00000551261 MYOM3Q5VTT5 1437 aa21.66■■□□□ 1.06
LETMD1-229ENST00000551261 KIF14Q15058 1648 aa21.66■■□□□ 1.06
LETMD1-229ENST00000551261 PHLDB1Q86UU1 1377 aa21.65■■□□□ 1.06
LETMD1-229ENST00000551261 MIA2Q96PC5 1412 aa21.63■■□□□ 1.05
LETMD1-229ENST00000551261 ITSN2Q9NZM3 1697 aa21.63■■□□□ 1.05
LETMD1-229ENST00000551261 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.62■■□□□ 1.05
LETMD1-229ENST00000551261 HNRNPUL2Q1KMD3 747 aaKnown RBP21.62■■□□□ 1.05
LETMD1-229ENST00000551261 FGD6Q6ZV73 1430 aa21.62■■□□□ 1.05
LETMD1-229ENST00000551261 PLEKHD1A6NEE1 506 aa21.61■■□□□ 1.05
LETMD1-229ENST00000551261 ZCCHC11Q5TAX3 1644 aaKnown RBP21.61■■□□□ 1.05
LETMD1-229ENST00000551261 TCOF1Q13428 1488 aaKnown RBP21.56■■□□□ 1.04
LETMD1-229ENST00000551261 PTPN23Q9H3S7 1636 aa21.52■■□□□ 1.04
LETMD1-229ENST00000551261 ARID3CA6NKF2 412 aa21.52■■□□□ 1.04
LETMD1-229ENST00000551261 ABCC10Q5T3U5 1492 aa21.51■■□□□ 1.03
LETMD1-229ENST00000551261 RIMBP3CA6NJZ7 1639 aa21.5■■□□□ 1.03
LETMD1-229ENST00000551261 RIMBP3BA6NNM3 1639 aa21.5■■□□□ 1.03
LETMD1-229ENST00000551261 RIMBP3Q9UFD9 1639 aa21.5■■□□□ 1.03
LETMD1-229ENST00000551261 WDR7Q9Y4E6 1490 aa21.46■■□□□ 1.03
LETMD1-229ENST00000551261 GPATCH8Q9UKJ3 1502 aaKnown RBP21.45■■□□□ 1.02
LETMD1-229ENST00000551261 PREX2Q70Z35 1606 aa21.44■■□□□ 1.02
LETMD1-229ENST00000551261 CDC42BPAQ5VT25 1732 aa21.43■■□□□ 1.02
LETMD1-229ENST00000551261 ARAP3Q8WWN8 1544 aa21.43■■□□□ 1.02
LETMD1-229ENST00000551261 NPM1P06748 294 aaKnown RBP eCLIP21.42■■□□□ 1.02
LETMD1-229ENST00000551261 MYO5CQ9NQX4 1742 aa21.41■■□□□ 1.02
LETMD1-229ENST00000551261 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.4■■□□□ 1.02
LETMD1-229ENST00000551261 FAM50AQ14320 339 aaKnown RBP21.4■■□□□ 1.02
LETMD1-229ENST00000551261 MAPKBP1O60336 1514 aa21.39■■□□□ 1.01
LETMD1-229ENST00000551261 TTC37Q6PGP7 1564 aa21.38■■□□□ 1.01
LETMD1-229ENST00000551261 AKNAQ7Z591 1439 aa21.38■■□□□ 1.01
LETMD1-229ENST00000551261 CAMSAP2Q08AD1 1489 aa21.37■■□□□ 1.01
LETMD1-229ENST00000551261 ASXL2Q76L83 1435 aa21.37■■□□□ 1.01
LETMD1-229ENST00000551261 DNMT1P26358 1616 aaKnown RBP21.37■■□□□ 1.01
LETMD1-229ENST00000551261 CFDP1Q9UEE9 299 aaPredicted RBP21.36■■□□□ 1.01
LETMD1-229ENST00000551261 ABCA9Q8IUA7 1624 aa21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms