RNA–Protein interactions for RNA: ENST00000551242.5

ERBB3-219, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 2,755 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-219ENST00000551242 CCER2I3L3R5 266 aa17.19■□□□□ 0.34
ERBB3-219ENST00000551242 PEG3Q9GZU2 1588 aa17.18■□□□□ 0.34
ERBB3-219ENST00000551242 CDK11AQ9UQ88 783 aaPredicted RBP17.17■□□□□ 0.34
ERBB3-219ENST00000551242 PRKCSHP14314 528 aaPredicted RBP17.13■□□□□ 0.33
ERBB3-219ENST00000551242 PRXQ9BXM0 1461 aa17.1■□□□□ 0.33
ERBB3-219ENST00000551242 DEKP35659 375 aaKnown RBP17.1■□□□□ 0.33
ERBB3-219ENST00000551242 SETD5Q9C0A6 1442 aa17.09■□□□□ 0.33
ERBB3-219ENST00000551242 HNRNPUQ00839 825 aaKnown RBP eCLIP17.09■□□□□ 0.33
ERBB3-219ENST00000551242 ERICH3Q5RHP9 1530 aa17.07■□□□□ 0.32
ERBB3-219ENST00000551242 FAM50AQ14320 339 aaKnown RBP17.05■□□□□ 0.32
ERBB3-219ENST00000551242 TOP2BQ02880 1626 aa17.03■□□□□ 0.32
ERBB3-219ENST00000551242 ARHGAP35Q9NRY4 1499 aa17.02■□□□□ 0.32
ERBB3-219ENST00000551242 NCAPD3P42695 1498 aa16.99■□□□□ 0.31
ERBB3-219ENST00000551242 NBR1Q14596 966 aa16.99■□□□□ 0.31
ERBB3-219ENST00000551242 MYT1LQ9UL68 1186 aa16.98■□□□□ 0.31
ERBB3-219ENST00000551242 TIMELESSQ9UNS1 1208 aa16.97■□□□□ 0.31
ERBB3-219ENST00000551242 PHLDB1Q86UU1 1377 aa16.97■□□□□ 0.31
ERBB3-219ENST00000551242 B4GALNT3Q6L9W6 998 aa16.96■□□□□ 0.31
ERBB3-219ENST00000551242 PPP4R2Q9NY27 417 aa16.95■□□□□ 0.3
ERBB3-219ENST00000551242 PAK3O75914 559 aaPredicted RBP16.93■□□□□ 0.3
ERBB3-219ENST00000551242 ANO8Q9HCE9 1232 aaPredicted RBP16.91■□□□□ 0.3
ERBB3-219ENST00000551242 TONSLQ96HA7 1378 aa16.91■□□□□ 0.3
ERBB3-219ENST00000551242 NOP58Q9Y2X3 529 aaKnown RBP16.9■□□□□ 0.3
ERBB3-219ENST00000551242 TIAM1Q13009 1591 aa16.9■□□□□ 0.3
ERBB3-219ENST00000551242 BIVM-ERCC5R4GMW8 1640 aa16.9■□□□□ 0.3
ERBB3-219ENST00000551242 HMGXB3Q12766 1538 aa16.89■□□□□ 0.29
ERBB3-219ENST00000551242 KIF27Q86VH2 1401 aa16.88■□□□□ 0.29
ERBB3-219ENST00000551242 CCDC184Q52MB2 194 aa16.88■□□□□ 0.29
ERBB3-219ENST00000551242 LRRC9Q6ZRR7 1453 aa16.88■□□□□ 0.29
ERBB3-219ENST00000551242 ATP1B4Q9UN42 357 aaPredicted RBP16.87■□□□□ 0.29
ERBB3-219ENST00000551242 ERICH6BQ5W0A0 696 aa16.86■□□□□ 0.29
ERBB3-219ENST00000551242 CC2D2AQ9P2K1 1620 aa16.83■□□□□ 0.29
ERBB3-219ENST00000551242 P3H3Q8IVL6 736 aa16.82■□□□□ 0.28
ERBB3-219ENST00000551242 FAM9BQ8IZU0 186 aa16.82■□□□□ 0.28
ERBB3-219ENST00000551242 CUX1P39880 1505 aa16.81■□□□□ 0.28
ERBB3-219ENST00000551242 WASHC2AQ641Q2 1341 aa16.81■□□□□ 0.28
ERBB3-219ENST00000551242 MAP3K1Q13233 1512 aa16.79■□□□□ 0.28
ERBB3-219ENST00000551242 SALL2Q9Y467 1007 aaPredicted RBP16.78■□□□□ 0.28
ERBB3-219ENST00000551242 CFTRP13569 1480 aa16.77■□□□□ 0.28
ERBB3-219ENST00000551242 DNAJC5BQ9UF47 199 aa16.77■□□□□ 0.28
ERBB3-219ENST00000551242 HSPA5P11021 654 aaKnown RBP16.76■□□□□ 0.27
ERBB3-219ENST00000551242 IL27Q8NEV9 243 aa16.73■□□□□ 0.27
ERBB3-219ENST00000551242 FHAD1B1AJZ9 1412 aa16.73■□□□□ 0.27
ERBB3-219ENST00000551242 CADPSQ9ULU8 1353 aa16.73■□□□□ 0.27
ERBB3-219ENST00000551242 RTL5Q5HYW3 569 aaPredicted RBP16.72■□□□□ 0.27
ERBB3-219ENST00000551242 MRS2Q9HD23 443 aa16.72■□□□□ 0.27
ERBB3-219ENST00000551242 RTN4Q9NQC3 1192 aaKnown RBP16.72■□□□□ 0.27
ERBB3-219ENST00000551242 CCDC18Q5T9S5 1454 aa16.71■□□□□ 0.27
ERBB3-219ENST00000551242 IPO9Q96P70 1041 aaKnown RBP16.71■□□□□ 0.26
ERBB3-219ENST00000551242 ANP32AP39687 249 aaKnown RBP16.7■□□□□ 0.26
ERBB3-219ENST00000551242 ZBED9Q6R2W3 1325 aa16.7■□□□□ 0.26
ERBB3-219ENST00000551242 CCDC136Q96JN2 1154 aa16.7■□□□□ 0.26
ERBB3-219ENST00000551242 IGF1RP08069 1367 aa16.7■□□□□ 0.26
ERBB3-219ENST00000551242 PRKRIP1Q9H875 184 aaPredicted RBP16.69■□□□□ 0.26
ERBB3-219ENST00000551242 ZBTB47Q9UFB7 747 aaPredicted RBP16.68■□□□□ 0.26
ERBB3-219ENST00000551242 KDM5BQ9UGL1 1544 aa16.68■□□□□ 0.26
ERBB3-219ENST00000551242 PCF11O94913 1555 aaKnown RBP16.67■□□□□ 0.26
ERBB3-219ENST00000551242 C11orf95C9JLR9 678 aaPredicted RBP16.67■□□□□ 0.26
ERBB3-219ENST00000551242 UACAQ9BZF9 1416 aa16.67■□□□□ 0.26
ERBB3-219ENST00000551242 NESP48681 1621 aa16.66■□□□□ 0.26
ERBB3-219ENST00000551242 PTPRKQ15262 1439 aa16.65■□□□□ 0.26
ERBB3-219ENST00000551242 AKNAQ7Z591 1439 aa16.65■□□□□ 0.26
ERBB3-219ENST00000551242 AQRO60306 1485 aaKnown RBP eCLIP16.65■□□□□ 0.267e-7■■■■□ 22
ERBB3-219ENST00000551242 CNTLNQ9NXG0 1405 aa16.65■□□□□ 0.26
ERBB3-219ENST00000551242 SENP3-EIF4A1A0A087X0R7 540 aa16.65■□□□□ 0.26
ERBB3-219ENST00000551242 EIF4G2P78344 907 aaKnown RBP eCLIP16.65■□□□□ 0.26
ERBB3-219ENST00000551242 CFAP43Q8NDM7 1665 aa16.64■□□□□ 0.25
ERBB3-219ENST00000551242 CARMIL1Q5VZK9 1371 aa16.64■□□□□ 0.25
ERBB3-219ENST00000551242 CNGB1Q14028 1251 aaPredicted RBP16.63■□□□□ 0.25
ERBB3-219ENST00000551242 FHOD3Q2V2M9 1422 aa16.62■□□□□ 0.25
ERBB3-219ENST00000551242 FGD6Q6ZV73 1430 aa16.61■□□□□ 0.25
ERBB3-219ENST00000551242 NCOA2Q15596 1464 aa16.61■□□□□ 0.25
ERBB3-219ENST00000551242 HFM1A2PYH4 1435 aa16.61■□□□□ 0.25
ERBB3-219ENST00000551242 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.61■□□□□ 0.25
ERBB3-219ENST00000551242 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.6■□□□□ 0.25
ERBB3-219ENST00000551242 NPM2Q86SE8 214 aaKnown RBP16.59■□□□□ 0.25
ERBB3-219ENST00000551242 PTPN23Q9H3S7 1636 aa16.58■□□□□ 0.25
ERBB3-219ENST00000551242 NAIPQ13075 1403 aa16.58■□□□□ 0.24
ERBB3-219ENST00000551242 FANCD2Q9BXW9 1451 aa16.57■□□□□ 0.24
ERBB3-219ENST00000551242 CCDC7Q96M83 1385 aa16.57■□□□□ 0.24
ERBB3-219ENST00000551242 LAS1LQ9Y4W2 734 aaKnown RBP16.57■□□□□ 0.24
ERBB3-219ENST00000551242 RRP7BPQ9NSQ0 103 aa16.55■□□□□ 0.24
ERBB3-219ENST00000551242 FGD5Q6ZNL6 1462 aa16.54■□□□□ 0.24
ERBB3-219ENST00000551242 SMG6Q86US8 1419 aaKnown RBP16.53■□□□□ 0.24
ERBB3-219ENST00000551242 L3MBTL2Q969R5 705 aa16.53■□□□□ 0.24
ERBB3-219ENST00000551242 CHIC2Q9UKJ5 165 aa16.53■□□□□ 0.24
ERBB3-219ENST00000551242 NUDCQ9Y266 331 aa16.53■□□□□ 0.24
ERBB3-219ENST00000551242 NCOA1Q15788 1441 aa16.53■□□□□ 0.24
ERBB3-219ENST00000551242 NEFMP07197 916 aa16.52■□□□□ 0.24
ERBB3-219ENST00000551242 FYCO1Q9BQS8 1478 aa16.51■□□□□ 0.23
ERBB3-219ENST00000551242 FOXD1Q16676 465 aa16.51■□□□□ 0.23
ERBB3-219ENST00000551242 FMN1Q68DA7 1419 aa16.51■□□□□ 0.23
ERBB3-219ENST00000551242 MTUS2Q5JR59 1369 aa16.51■□□□□ 0.23
ERBB3-219ENST00000551242 CASKIN1Q8WXD9 1431 aa16.5■□□□□ 0.23
ERBB3-219ENST00000551242 RAD54L2Q9Y4B4 1467 aa16.5■□□□□ 0.23
ERBB3-219ENST00000551242 RNF123Q5XPI4 1314 aa16.5■□□□□ 0.23
ERBB3-219ENST00000551242 KIF7Q2M1P5 1343 aa16.49■□□□□ 0.23
ERBB3-219ENST00000551242 DENND4BO75064 1496 aaPredicted RBP16.47■□□□□ 0.23
ERBB3-219ENST00000551242 NBPF8Q3BBV2 869 aa16.46■□□□□ 0.23
ERBB3-219ENST00000551242 PRDM2Q13029 1718 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms