RNA–Protein interactions for RNA: ENST00000551242.5

ERBB3-219, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 2,755 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-219ENST00000551242 NISCHQ9Y2I1 1504 aa23.15■■□□□ 1.3
ERBB3-219ENST00000551242 HRCP23327 699 aa20.74■□□□□ 0.91
ERBB3-219ENST00000551242 SHROOM4Q9ULL8 1493 aa20.67■□□□□ 0.9
ERBB3-219ENST00000551242 SUPT5HO00267 1087 aaKnown RBP20.58■□□□□ 0.89
ERBB3-219ENST00000551242 PPARGC1BQ86YN6 1023 aaKnown RBP20.42■□□□□ 0.86
ERBB3-219ENST00000551242 PCGF6Q9BYE7 350 aa20.4■□□□□ 0.86
ERBB3-219ENST00000551242 MYO15BQ96JP2 1530 aa20.32■□□□□ 0.84
ERBB3-219ENST00000551242 CHIC1Q5VXU3 224 aa20.18■□□□□ 0.82
ERBB3-219ENST00000551242 PELP1Q8IZL8 1130 aaKnown RBP19.84■□□□□ 0.77
ERBB3-219ENST00000551242 LOC105371045A0A1W2PR82 267 aa19.79■□□□□ 0.76
ERBB3-219ENST00000551242 DCAF1Q9Y4B6 1507 aa19.77■□□□□ 0.76
ERBB3-219ENST00000551242 DCAF8L2P0C7V8 631 aa19.72■□□□□ 0.75
ERBB3-219ENST00000551242 ZCCHC6Q5VYS8 1495 aaKnown RBP19.68■□□□□ 0.74
ERBB3-219ENST00000551242 TRIM26Q12899 539 aaPredicted RBP19.66■□□□□ 0.74
ERBB3-219ENST00000551242 SCAF1Q9H7N4 1312 aaKnown RBP19.65■□□□□ 0.74
ERBB3-219ENST00000551242 CCDC180Q9P1Z9 1646 aa19.62■□□□□ 0.73
ERBB3-219ENST00000551242 ZEB1P37275 1124 aaPredicted RBP19.44■□□□□ 0.7
ERBB3-219ENST00000551242 NEUROD1Q13562 356 aa19.13■□□□□ 0.65
ERBB3-219ENST00000551242 ACIN1Q9UKV3 1341 aaKnown RBP19.13■□□□□ 0.65
ERBB3-219ENST00000551242 FAM9AQ8IZU1 332 aaPredicted RBP19.06■□□□□ 0.64
ERBB3-219ENST00000551242 EHMT2Q96KQ7 1210 aa19.05■□□□□ 0.64
ERBB3-219ENST00000551242 GTF3C3Q9Y5Q9 886 aa19.02■□□□□ 0.63
ERBB3-219ENST00000551242 MYT1Q01538 1121 aa19■□□□□ 0.63
ERBB3-219ENST00000551242 TRIM41Q8WV44 630 aa18.98■□□□□ 0.63
ERBB3-219ENST00000551242 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.93■□□□□ 0.62
ERBB3-219ENST00000551242 CENPBP07199 599 aaPredicted RBP18.86■□□□□ 0.61
ERBB3-219ENST00000551242 CCER1Q8TC90 406 aaPredicted RBP18.85■□□□□ 0.61
ERBB3-219ENST00000551242 ABCC9O60706 1549 aa18.85■□□□□ 0.61
ERBB3-219ENST00000551242 DIEXFQ68CQ4 756 aaKnown RBP18.85■□□□□ 0.61
ERBB3-219ENST00000551242 RSF1Q96T23 1441 aaPredicted RBP18.68■□□□□ 0.58
ERBB3-219ENST00000551242 RB1CC1Q8TDY2 1594 aa18.62■□□□□ 0.57
ERBB3-219ENST00000551242 YTHDC1Q96MU7 727 aaKnown RBP18.62■□□□□ 0.57
ERBB3-219ENST00000551242 SCRIBQ14160 1630 aa18.6■□□□□ 0.57
ERBB3-219ENST00000551242 TTBK1Q5TCY1 1321 aaPredicted RBP18.58■□□□□ 0.57
ERBB3-219ENST00000551242 ZNF316A6NFI3 1004 aaPredicted RBP18.46■□□□□ 0.55
ERBB3-219ENST00000551242 MIER1Q8N108 512 aa18.4■□□□□ 0.54
ERBB3-219ENST00000551242 NACADO15069 1562 aa18.31■□□□□ 0.52
ERBB3-219ENST00000551242 WRNQ14191 1432 aaPredicted RBP eCLIP18.2■□□□□ 0.5
ERBB3-219ENST00000551242 CECR2Q9BXF3 1484 aa18.19■□□□□ 0.5
ERBB3-219ENST00000551242 CEP162Q5TB80 1403 aa18.17■□□□□ 0.5
ERBB3-219ENST00000551242 MROH2BQ7Z745 1585 aa18.14■□□□□ 0.5
ERBB3-219ENST00000551242 HNRNPUL2Q1KMD3 747 aaKnown RBP18.12■□□□□ 0.49
ERBB3-219ENST00000551242 SUPT16HQ9Y5B9 1047 aaKnown RBP18.09■□□□□ 0.49
ERBB3-219ENST00000551242 WIZO95785 1651 aa18.08■□□□□ 0.49
ERBB3-219ENST00000551242 PABPN1Q86U42 306 aaKnown RBP eCLIP18.07■□□□□ 0.48
ERBB3-219ENST00000551242 CCDC88BA6NC98 1476 aa18.04■□□□□ 0.48
ERBB3-219ENST00000551242 UBTFP17480 764 aaKnown RBP18.03■□□□□ 0.48
ERBB3-219ENST00000551242 ABCC8Q09428 1581 aa18.01■□□□□ 0.47
ERBB3-219ENST00000551242 TNIKQ9UKE5 1360 aa18.01■□□□□ 0.47
ERBB3-219ENST00000551242 TSHZ2Q9NRE2 1034 aa18.01■□□□□ 0.47
ERBB3-219ENST00000551242 SOGA1O94964 1423 aa17.99■□□□□ 0.47
ERBB3-219ENST00000551242 ANP32EQ9BTT0 268 aa17.99■□□□□ 0.47
ERBB3-219ENST00000551242 EIF4G1Q04637 1599 aaKnown RBP17.99■□□□□ 0.47
ERBB3-219ENST00000551242 BCL11AQ9H165 835 aa17.96■□□□□ 0.47
ERBB3-219ENST00000551242 CSRNP3Q8WYN3 585 aa17.91■□□□□ 0.46
ERBB3-219ENST00000551242 CLSPNQ9HAW4 1339 aa17.9■□□□□ 0.46
ERBB3-219ENST00000551242 RUSC2Q8N2Y8 1516 aa17.9■□□□□ 0.46
ERBB3-219ENST00000551242 BAZ1AQ9NRL2 1556 aaPredicted RBP17.88■□□□□ 0.45
ERBB3-219ENST00000551242 UNC13AQ9UPW8 1703 aa17.82■□□□□ 0.44
ERBB3-219ENST00000551242 BCANQ96GW7 911 aa17.79■□□□□ 0.44
ERBB3-219ENST00000551242 GOLGA3Q08378 1498 aa17.78■□□□□ 0.44
ERBB3-219ENST00000551242 EEA1Q15075 1411 aa17.74■□□□□ 0.43
ERBB3-219ENST00000551242 KCNH8Q96L42 1107 aa17.73■□□□□ 0.43
ERBB3-219ENST00000551242 RANGAP1P46060 587 aaPredicted RBP17.71■□□□□ 0.43
ERBB3-219ENST00000551242 APLP2Q06481 763 aa17.71■□□□□ 0.43
ERBB3-219ENST00000551242 CLIP1P30622 1438 aa17.68■□□□□ 0.42
ERBB3-219ENST00000551242 DHX57Q6P158 1386 aaKnown RBP17.68■□□□□ 0.42
ERBB3-219ENST00000551242 TOP2AP11388 1531 aaKnown RBP17.66■□□□□ 0.42
ERBB3-219ENST00000551242 BICRAQ9NZM4 1560 aa17.65■□□□□ 0.42
ERBB3-219ENST00000551242 SMARCA2P51531 1590 aa17.65■□□□□ 0.42
ERBB3-219ENST00000551242 FKBP8Q14318 412 aa17.64■□□□□ 0.41
ERBB3-219ENST00000551242 VPS8Q8N3P4 1428 aa17.64■□□□□ 0.41
ERBB3-219ENST00000551242 SMARCA4P51532 1647 aa17.63■□□□□ 0.41
ERBB3-219ENST00000551242 RBM19Q9Y4C8 960 aaKnown RBP17.58■□□□□ 0.41
ERBB3-219ENST00000551242 CEP164Q9UPV0 1460 aa17.58■□□□□ 0.41
ERBB3-219ENST00000551242 ITGAEP38570 1179 aa17.52■□□□□ 0.4
ERBB3-219ENST00000551242 KIF21BO75037 1637 aa17.49■□□□□ 0.39
ERBB3-219ENST00000551242 RAPGEF2Q9Y4G8 1499 aa17.48■□□□□ 0.39
ERBB3-219ENST00000551242 KANK4Q5T7N3 995 aaPredicted RBP17.46■□□□□ 0.39
ERBB3-219ENST00000551242 MSH5O43196 834 aa17.45■□□□□ 0.38
ERBB3-219ENST00000551242 NEFLP07196 543 aa17.44■□□□□ 0.38
ERBB3-219ENST00000551242 DDX10Q13206 875 aaKnown RBP17.44■□□□□ 0.38
ERBB3-219ENST00000551242 SYNJ1O43426 1573 aa17.41■□□□□ 0.38
ERBB3-219ENST00000551242 TRIM52Q96A61 297 aa17.41■□□□□ 0.38
ERBB3-219ENST00000551242 BAZ1BQ9UIG0 1483 aaKnown RBP17.39■□□□□ 0.37
ERBB3-219ENST00000551242 HIRIP3Q9BW71 556 aaPredicted RBP17.32■□□□□ 0.36
ERBB3-219ENST00000551242 ATAD2BQ9ULI0 1458 aa17.32■□□□□ 0.36
ERBB3-219ENST00000551242 RRBP1Q9P2E9 1410 aaKnown RBP17.29■□□□□ 0.36
ERBB3-219ENST00000551242 ARAP1Q96P48 1450 aa17.28■□□□□ 0.36
ERBB3-219ENST00000551242 PPP1R15AO75807 674 aaPredicted RBP17.27■□□□□ 0.36
ERBB3-219ENST00000551242 CCNB3Q8WWL7 1395 aa17.26■□□□□ 0.35
ERBB3-219ENST00000551242 SIN3AQ96ST3 1273 aa17.26■□□□□ 0.35
ERBB3-219ENST00000551242 CUX2O14529 1486 aa17.26■□□□□ 0.35
ERBB3-219ENST00000551242 RAB3GAP2Q9H2M9 1393 aa17.25■□□□□ 0.35
ERBB3-219ENST00000551242 ERICH6Q7L0X2 663 aa17.25■□□□□ 0.35
ERBB3-219ENST00000551242 MAPKBP1O60336 1514 aa17.25■□□□□ 0.35
ERBB3-219ENST00000551242 WDR97A6NE52 1622 aa17.24■□□□□ 0.35
ERBB3-219ENST00000551242 IRX6P78412 446 aaPredicted RBP17.23■□□□□ 0.35
ERBB3-219ENST00000551242 FANCIQ9NVI1 1328 aa17.21■□□□□ 0.35
ERBB3-219ENST00000551242 ANP32CO43423 234 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms