RNA–Protein interactions for RNA: ENST00000550709.5

TROAP-213, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TROAP, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-213ENST00000550709 JPH4Q96JJ6 628 aa22.93■■□□□ 1.26
TROAP-213ENST00000550709 RAPGEF2Q9Y4G8 1499 aa22.92■■□□□ 1.26
TROAP-213ENST00000550709 KIAA0586Q9BVV6 1533 aa22.86■■□□□ 1.25
TROAP-213ENST00000550709 ARAP1Q96P48 1450 aa22.85■■□□□ 1.25
TROAP-213ENST00000550709 EEA1Q15075 1411 aa22.85■■□□□ 1.25
TROAP-213ENST00000550709 PRG4Q92954 1404 aaPredicted RBP22.84■■□□□ 1.25
TROAP-213ENST00000550709 PRXQ9BXM0 1461 aa22.84■■□□□ 1.25
TROAP-213ENST00000550709 ERCC6L2Q5T890 1561 aa22.8■■□□□ 1.24
TROAP-213ENST00000550709 EHMT2Q96KQ7 1210 aa22.76■■□□□ 1.23
TROAP-213ENST00000550709 SHROOM2Q13796 1616 aa22.75■■□□□ 1.23
TROAP-213ENST00000550709 TTBK1Q5TCY1 1321 aaPredicted RBP22.71■■□□□ 1.23
TROAP-213ENST00000550709 IQGAP2Q13576 1575 aa22.68■■□□□ 1.22
TROAP-213ENST00000550709 CARMIL2Q6F5E8 1435 aa22.65■■□□□ 1.22
TROAP-213ENST00000550709 RANGAP1P46060 587 aaPredicted RBP22.62■■□□□ 1.21
TROAP-213ENST00000550709 UBTFP17480 764 aaKnown RBP22.6■■□□□ 1.21
TROAP-213ENST00000550709 PTPRGP23470 1445 aa22.59■■□□□ 1.21
TROAP-213ENST00000550709 TNIKQ9UKE5 1360 aa22.58■■□□□ 1.21
TROAP-213ENST00000550709 UGGT2Q9NYU1 1516 aa22.57■■□□□ 1.2
TROAP-213ENST00000550709 DISP1Q96F81 1524 aa22.57■■□□□ 1.2
TROAP-213ENST00000550709 P3H3Q8IVL6 736 aa22.55■■□□□ 1.2
TROAP-213ENST00000550709 KIF21BO75037 1637 aa22.54■■□□□ 1.2
TROAP-213ENST00000550709 GOLGA3Q08378 1498 aa22.51■■□□□ 1.19
TROAP-213ENST00000550709 CTTNBP2Q8WZ74 1663 aa22.5■■□□□ 1.19
TROAP-213ENST00000550709 TRHP20396 242 aaPredicted RBP22.49■■□□□ 1.19
TROAP-213ENST00000550709 NPM1P06748 294 aaKnown RBP eCLIP22.47■■□□□ 1.19
TROAP-213ENST00000550709 KIAA0556O60303 1618 aa22.46■■□□□ 1.19
TROAP-213ENST00000550709 UACAQ9BZF9 1416 aa22.4■■□□□ 1.18
TROAP-213ENST00000550709 ADCY10Q96PN6 1610 aa22.37■■□□□ 1.17
TROAP-213ENST00000550709 PLB1Q6P1J6 1458 aa22.34■■□□□ 1.17
TROAP-213ENST00000550709 FHOD3Q2V2M9 1422 aa22.33■■□□□ 1.17
TROAP-213ENST00000550709 UHRF1BP1LA0JNW5 1464 aa22.31■■□□□ 1.16
TROAP-213ENST00000550709 ARID3CA6NKF2 412 aa22.31■■□□□ 1.16
TROAP-213ENST00000550709 ABCC2Q92887 1545 aa22.31■■□□□ 1.16
TROAP-213ENST00000550709 SAMD9Q5K651 1589 aa22.3■■□□□ 1.16
TROAP-213ENST00000550709 LOC105371045A0A1W2PR82 267 aa22.29■■□□□ 1.16
TROAP-213ENST00000550709 FAM69CQ0P6D2 419 aa22.24■■□□□ 1.15
TROAP-213ENST00000550709 EFCAB5A4FU69 1503 aa22.24■■□□□ 1.15
TROAP-213ENST00000550709 ARHGAP35Q9NRY4 1499 aa22.22■■□□□ 1.15
TROAP-213ENST00000550709 ABCA8O94911 1581 aa22.22■■□□□ 1.15
TROAP-213ENST00000550709 KDM5BQ9UGL1 1544 aa22.21■■□□□ 1.15
TROAP-213ENST00000550709 ASXL2Q76L83 1435 aa22.2■■□□□ 1.14
TROAP-213ENST00000550709 MAPKBP1O60336 1514 aa22.2■■□□□ 1.14
TROAP-213ENST00000550709 ATP1B4Q9UN42 357 aaPredicted RBP22.19■■□□□ 1.14
TROAP-213ENST00000550709 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.18■■□□□ 1.14
TROAP-213ENST00000550709 HNRNPUL2Q1KMD3 747 aaKnown RBP22.18■■□□□ 1.14
TROAP-213ENST00000550709 CLIP1P30622 1438 aa22.16■■□□□ 1.14
TROAP-213ENST00000550709 ABCC10Q5T3U5 1492 aa22.15■■□□□ 1.14
TROAP-213ENST00000550709 ATP10BO94823 1461 aa22.12■■□□□ 1.13
TROAP-213ENST00000550709 KCNH8Q96L42 1107 aa22.12■■□□□ 1.13
TROAP-213ENST00000550709 ZCCHC11Q5TAX3 1644 aaKnown RBP22.11■■□□□ 1.13
TROAP-213ENST00000550709 FMN1Q68DA7 1419 aa22.11■■□□□ 1.13
TROAP-213ENST00000550709 RAPGEF6Q8TEU7 1601 aa22.1■■□□□ 1.13
TROAP-213ENST00000550709 NUP153P49790 1475 aaKnown RBP22.09■■□□□ 1.13
TROAP-213ENST00000550709 CEP162Q5TB80 1403 aa22.06■■□□□ 1.12
TROAP-213ENST00000550709 WDR7Q9Y4E6 1490 aa22.06■■□□□ 1.12
TROAP-213ENST00000550709 DIP2BQ9P265 1576 aa22.05■■□□□ 1.12
TROAP-213ENST00000550709 EPRSP07814 1512 aaKnown RBP22.03■■□□□ 1.12
TROAP-213ENST00000550709 PLEKHD1A6NEE1 506 aa22.01■■□□□ 1.11
TROAP-213ENST00000550709 KIF13AQ9H1H9 1805 aa21.98■■□□□ 1.11
TROAP-213ENST00000550709 CDK13Q14004 1512 aaKnown RBP21.96■■□□□ 1.11
TROAP-213ENST00000550709 CASKIN1Q8WXD9 1431 aa21.95■■□□□ 1.1
TROAP-213ENST00000550709 GLI2P10070 1586 aa21.94■■□□□ 1.1
TROAP-213ENST00000550709 HECW1Q76N89 1606 aa21.92■■□□□ 1.1
TROAP-213ENST00000550709 CDK11AQ9UQ88 783 aaPredicted RBP21.92■■□□□ 1.1
TROAP-213ENST00000550709 CD109Q6YHK3 1445 aa21.9■■□□□ 1.1
TROAP-213ENST00000550709 PCF11O94913 1555 aaKnown RBP21.89■■□□□ 1.09
TROAP-213ENST00000550709 FYCO1Q9BQS8 1478 aa21.86■■□□□ 1.09
TROAP-213ENST00000550709 TSPOAP1O95153 1857 aa21.85■■□□□ 1.09
TROAP-213ENST00000550709 CCDC18Q5T9S5 1454 aa21.82■■□□□ 1.08
TROAP-213ENST00000550709 MAP3K4Q9Y6R4 1608 aa21.81■■□□□ 1.08
TROAP-213ENST00000550709 TEX14Q8IWB6 1497 aa21.8■■□□□ 1.08
TROAP-213ENST00000550709 TROQ12816 1431 aaPredicted RBP21.79■■□□□ 1.08
TROAP-213ENST00000550709 MAGI3Q5TCQ9 1506 aa21.77■■□□□ 1.08
TROAP-213ENST00000550709 VPS8Q8N3P4 1428 aa21.76■■□□□ 1.07
TROAP-213ENST00000550709 PPRC1Q5VV67 1664 aaKnown RBP21.75■■□□□ 1.07
TROAP-213ENST00000550709 ABCA9Q8IUA7 1624 aa21.74■■□□□ 1.07
TROAP-213ENST00000550709 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.74■■□□□ 1.07
TROAP-213ENST00000550709 CFAP43Q8NDM7 1665 aa21.73■■□□□ 1.07
TROAP-213ENST00000550709 LRRIQ1Q96JM4 1722 aa21.72■■□□□ 1.07
TROAP-213ENST00000550709 COL17A1Q9UMD9 1497 aaPredicted RBP21.71■■□□□ 1.07
TROAP-213ENST00000550709 MTUS2Q5JR59 1369 aa21.71■■□□□ 1.07
TROAP-213ENST00000550709 KDM6BO15054 1643 aa21.7■■□□□ 1.06
TROAP-213ENST00000550709 TTC37Q6PGP7 1564 aa21.68■■□□□ 1.06
TROAP-213ENST00000550709 KIF14Q15058 1648 aa21.66■■□□□ 1.06
TROAP-213ENST00000550709 PLCH2O75038 1416 aa21.65■■□□□ 1.06
TROAP-213ENST00000550709 RAPGEF3O95398 923 aa21.64■■□□□ 1.05
TROAP-213ENST00000550709 EFCAB2Q5VUJ9 269 aa21.64■■□□□ 1.05
TROAP-213ENST00000550709 FANCAO15360 1455 aa21.64■■□□□ 1.05
TROAP-213ENST00000550709 PHLDB1Q86UU1 1377 aa21.63■■□□□ 1.05
TROAP-213ENST00000550709 APLP2Q06481 763 aa21.63■■□□□ 1.05
TROAP-213ENST00000550709 NEO1Q92859 1461 aa21.63■■□□□ 1.05
TROAP-213ENST00000550709 AKNAQ7Z591 1439 aa21.62■■□□□ 1.05
TROAP-213ENST00000550709 KANK4Q5T7N3 995 aaPredicted RBP21.59■■□□□ 1.05
TROAP-213ENST00000550709 ARAP3Q8WWN8 1544 aa21.58■■□□□ 1.04
TROAP-213ENST00000550709 ZNF777Q9ULD5 760 aaPredicted RBP21.57■■□□□ 1.04
TROAP-213ENST00000550709 CCNB3Q8WWL7 1395 aa21.57■■□□□ 1.04
TROAP-213ENST00000550709 ARHGAP5Q13017 1502 aa21.56■■□□□ 1.04
TROAP-213ENST00000550709 TIAM1Q13009 1591 aa21.55■■□□□ 1.04
TROAP-213ENST00000550709 CFDP1Q9UEE9 299 aaPredicted RBP21.54■■□□□ 1.04
TROAP-213ENST00000550709 EHBP1L1Q8N3D4 1523 aa21.54■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms