RNA–Protein interactions for RNA: ENST00000549815.1

GCN1-206, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-206ENST00000549815 PRG4Q92954 1404 aaPredicted RBP23.41■■□□□ 1.34
GCN1-206ENST00000549815 JPH4Q96JJ6 628 aa23.4■■□□□ 1.34
GCN1-206ENST00000549815 KIAA0586Q9BVV6 1533 aa23.33■■□□□ 1.32
GCN1-206ENST00000549815 CARMIL1Q5VZK9 1371 aa23.29■■□□□ 1.32
GCN1-206ENST00000549815 ADCY10Q96PN6 1610 aa23.15■■□□□ 1.3
GCN1-206ENST00000549815 KIF13AQ9H1H9 1805 aa23.14■■□□□ 1.29
GCN1-206ENST00000549815 IQGAP2Q13576 1575 aa23.11■■□□□ 1.29
GCN1-206ENST00000549815 RAPGEF2Q9Y4G8 1499 aa23.11■■□□□ 1.29
GCN1-206ENST00000549815 MAPKBP1O60336 1514 aa23.1■■□□□ 1.29
GCN1-206ENST00000549815 PTPRGP23470 1445 aa23.05■■□□□ 1.28
GCN1-206ENST00000549815 CARMIL2Q6F5E8 1435 aa23.05■■□□□ 1.28
GCN1-206ENST00000549815 ABCC10Q5T3U5 1492 aa23.05■■□□□ 1.28
GCN1-206ENST00000549815 TNIKQ9UKE5 1360 aa23.04■■□□□ 1.28
GCN1-206ENST00000549815 NPM1P06748 294 aaKnown RBP eCLIP23.04■■□□□ 1.28
GCN1-206ENST00000549815 DISP1Q96F81 1524 aa23.03■■□□□ 1.28
GCN1-206ENST00000549815 UGGT2Q9NYU1 1516 aa23.01■■□□□ 1.27
GCN1-206ENST00000549815 DIP2BQ9P265 1576 aa23■■□□□ 1.27
GCN1-206ENST00000549815 FAM69CQ0P6D2 419 aa22.96■■□□□ 1.27
GCN1-206ENST00000549815 PRXQ9BXM0 1461 aa22.95■■□□□ 1.26
GCN1-206ENST00000549815 CTTNBP2Q8WZ74 1663 aa22.93■■□□□ 1.26
GCN1-206ENST00000549815 KIAA0556O60303 1618 aa22.93■■□□□ 1.26
GCN1-206ENST00000549815 ABCC2Q92887 1545 aa22.93■■□□□ 1.26
GCN1-206ENST00000549815 UHRF1BP1LA0JNW5 1464 aa22.93■■□□□ 1.26
GCN1-206ENST00000549815 TTBK1Q5TCY1 1321 aaPredicted RBP22.93■■□□□ 1.26
GCN1-206ENST00000549815 UACAQ9BZF9 1416 aa22.91■■□□□ 1.26
GCN1-206ENST00000549815 KDM5BQ9UGL1 1544 aa22.83■■□□□ 1.25
GCN1-206ENST00000549815 ASXL2Q76L83 1435 aa22.82■■□□□ 1.24
GCN1-206ENST00000549815 PLB1Q6P1J6 1458 aa22.81■■□□□ 1.24
GCN1-206ENST00000549815 GLI2P10070 1586 aa22.79■■□□□ 1.24
GCN1-206ENST00000549815 TSPOAP1O95153 1857 aa22.79■■□□□ 1.24
GCN1-206ENST00000549815 GOLGA3Q08378 1498 aa22.79■■□□□ 1.24
GCN1-206ENST00000549815 ZCCHC11Q5TAX3 1644 aaKnown RBP22.77■■□□□ 1.24
GCN1-206ENST00000549815 CSRNP3Q8WYN3 585 aa22.75■■□□□ 1.23
GCN1-206ENST00000549815 PPRC1Q5VV67 1664 aaKnown RBP22.74■■□□□ 1.23
GCN1-206ENST00000549815 ABCA8O94911 1581 aa22.73■■□□□ 1.23
GCN1-206ENST00000549815 KDM6BO15054 1643 aa22.73■■□□□ 1.23
GCN1-206ENST00000549815 EPRSP07814 1512 aaKnown RBP22.72■■□□□ 1.23
GCN1-206ENST00000549815 EEA1Q15075 1411 aa22.7■■□□□ 1.22
GCN1-206ENST00000549815 MAP3K4Q9Y6R4 1608 aa22.67■■□□□ 1.22
GCN1-206ENST00000549815 SAMD9Q5K651 1589 aa22.64■■□□□ 1.22
GCN1-206ENST00000549815 AEBP2Q6ZN18 517 aaPredicted RBP22.64■■□□□ 1.21
GCN1-206ENST00000549815 WDR7Q9Y4E6 1490 aa22.63■■□□□ 1.21
GCN1-206ENST00000549815 P3H3Q8IVL6 736 aa22.57■■□□□ 1.2
GCN1-206ENST00000549815 COL17A1Q9UMD9 1497 aaPredicted RBP22.54■■□□□ 1.2
GCN1-206ENST00000549815 KIF21BO75037 1637 aa22.54■■□□□ 1.2
GCN1-206ENST00000549815 FAM9AQ8IZU1 332 aaPredicted RBP22.54■■□□□ 1.2
GCN1-206ENST00000549815 TEX14Q8IWB6 1497 aa22.54■■□□□ 1.2
GCN1-206ENST00000549815 ATP10BO94823 1461 aa22.52■■□□□ 1.2
GCN1-206ENST00000549815 CFAP43Q8NDM7 1665 aa22.51■■□□□ 1.19
GCN1-206ENST00000549815 CHIC1Q5VXU3 224 aa22.49■■□□□ 1.19
GCN1-206ENST00000549815 RAPGEF6Q8TEU7 1601 aa22.49■■□□□ 1.19
GCN1-206ENST00000549815 MAGI3Q5TCQ9 1506 aa22.48■■□□□ 1.19
GCN1-206ENST00000549815 CD109Q6YHK3 1445 aa22.47■■□□□ 1.19
GCN1-206ENST00000549815 KCNH8Q96L42 1107 aa22.46■■□□□ 1.19
GCN1-206ENST00000549815 FHOD3Q2V2M9 1422 aa22.45■■□□□ 1.18
GCN1-206ENST00000549815 KDM4FA0A1W2PPD8 638 aa22.44■■□□□ 1.18
GCN1-206ENST00000549815 ARID3CA6NKF2 412 aa22.44■■□□□ 1.18
GCN1-206ENST00000549815 NUP153P49790 1475 aaKnown RBP22.41■■□□□ 1.18
GCN1-206ENST00000549815 EFCAB5A4FU69 1503 aa22.41■■□□□ 1.18
GCN1-206ENST00000549815 RANGAP1P46060 587 aaPredicted RBP22.4■■□□□ 1.18
GCN1-206ENST00000549815 ABCA9Q8IUA7 1624 aa22.38■■□□□ 1.17
GCN1-206ENST00000549815 ARAP3Q8WWN8 1544 aa22.3■■□□□ 1.16
GCN1-206ENST00000549815 ADGRL1O94910 1474 aa22.29■■□□□ 1.16
GCN1-206ENST00000549815 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.28■■□□□ 1.16
GCN1-206ENST00000549815 HNRNPUL2Q1KMD3 747 aaKnown RBP22.28■■□□□ 1.16
GCN1-206ENST00000549815 UBTFP17480 764 aaKnown RBP22.27■■□□□ 1.16
GCN1-206ENST00000549815 EHMT2Q96KQ7 1210 aa22.26■■□□□ 1.15
GCN1-206ENST00000549815 ARHGAP35Q9NRY4 1499 aa22.25■■□□□ 1.15
GCN1-206ENST00000549815 PHLDB1Q86UU1 1377 aa22.24■■□□□ 1.15
GCN1-206ENST00000549815 NEO1Q92859 1461 aa22.22■■□□□ 1.15
GCN1-206ENST00000549815 PLEKHD1A6NEE1 506 aa22.21■■□□□ 1.15
GCN1-206ENST00000549815 CDK13Q14004 1512 aaKnown RBP22.2■■□□□ 1.14
GCN1-206ENST00000549815 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.18■■□□□ 1.14
GCN1-206ENST00000549815 FMN1Q68DA7 1419 aa22.18■■□□□ 1.14
GCN1-206ENST00000549815 FRMPD1Q5SYB0 1578 aa22.16■■□□□ 1.14
GCN1-206ENST00000549815 HECW1Q76N89 1606 aa22.15■■□□□ 1.14
GCN1-206ENST00000549815 TTC37Q6PGP7 1564 aa22.15■■□□□ 1.14
GCN1-206ENST00000549815 RAPGEF3O95398 923 aa22.13■■□□□ 1.13
GCN1-206ENST00000549815 FANCAO15360 1455 aa22.09■■□□□ 1.13
GCN1-206ENST00000549815 LRRIQ1Q96JM4 1722 aa22.09■■□□□ 1.13
GCN1-206ENST00000549815 CFAP74Q9C0B2 1584 aa22.08■■□□□ 1.13
GCN1-206ENST00000549815 AKNAQ7Z591 1439 aa22.08■■□□□ 1.13
GCN1-206ENST00000549815 RICTORQ6R327 1708 aa22.07■■□□□ 1.12
GCN1-206ENST00000549815 DENND4BO75064 1496 aaPredicted RBP22.05■■□□□ 1.12
GCN1-206ENST00000549815 ATP1B4Q9UN42 357 aaPredicted RBP22.04■■□□□ 1.12
GCN1-206ENST00000549815 PLCH2O75038 1416 aa22.04■■□□□ 1.12
GCN1-206ENST00000549815 KIF14Q15058 1648 aa22.01■■□□□ 1.11
GCN1-206ENST00000549815 TROQ12816 1431 aaPredicted RBP22■■□□□ 1.11
GCN1-206ENST00000549815 ADAMTSL3P82987 1691 aa22■■□□□ 1.11
GCN1-206ENST00000549815 ARHGEF40Q8TER5 1519 aa22■■□□□ 1.11
GCN1-206ENST00000549815 CASKIN1Q8WXD9 1431 aa21.99■■□□□ 1.11
GCN1-206ENST00000549815 CDK11AQ9UQ88 783 aaPredicted RBP21.99■■□□□ 1.11
GCN1-206ENST00000549815 ZMYM4Q5VZL5 1548 aa21.99■■□□□ 1.11
GCN1-206ENST00000549815 PCF11O94913 1555 aaKnown RBP21.99■■□□□ 1.11
GCN1-206ENST00000549815 MYO5CQ9NQX4 1742 aa21.98■■□□□ 1.11
GCN1-206ENST00000549815 BCORL1Q5H9F3 1711 aa21.95■■□□□ 1.1
GCN1-206ENST00000549815 HECW2Q9P2P5 1572 aa21.94■■□□□ 1.1
GCN1-206ENST00000549815 CCDC18Q5T9S5 1454 aa21.93■■□□□ 1.1
GCN1-206ENST00000549815 SCAPERQ9BY12 1400 aa21.93■■□□□ 1.1
GCN1-206ENST00000549815 CLIP1P30622 1438 aa21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms