RNA–Protein interactions for RNA: ENST00000549715.1

AC089998.3-201, humanhuman

BASIC

Gene AC089998.3, Length 493 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC089998.3-201ENST00000549715 APLP2Q06481 763 aa13.5□□□□□ -0.25
AC089998.3-201ENST00000549715 AQRO60306 1485 aaKnown RBP eCLIP13.49□□□□□ -0.25
AC089998.3-201ENST00000549715 CTTNBP2Q8WZ74 1663 aa13.47□□□□□ -0.25
AC089998.3-201ENST00000549715 DNAJC5BQ9UF47 199 aa13.47□□□□□ -0.25
AC089998.3-201ENST00000549715 GRIN2BQ13224 1484 aa13.43□□□□□ -0.26
AC089998.3-201ENST00000549715 FYCO1Q9BQS8 1478 aa13.42□□□□□ -0.26
AC089998.3-201ENST00000549715 SAMD9Q5K651 1589 aa13.41□□□□□ -0.26
AC089998.3-201ENST00000549715 FMN1Q68DA7 1419 aa13.41□□□□□ -0.26
AC089998.3-201ENST00000549715 ADAMTS12P58397 1594 aa13.41□□□□□ -0.26
AC089998.3-201ENST00000549715 PBRM1Q86U86 1689 aa13.4□□□□□ -0.26
AC089998.3-201ENST00000549715 PIAS4Q8N2W9 510 aaPredicted RBP13.4□□□□□ -0.26
AC089998.3-201ENST00000549715 TDRD9Q8NDG6 1382 aaKnown RBP13.4□□□□□ -0.26
AC089998.3-201ENST00000549715 THOC2Q8NI27 1593 aaKnown RBP13.4□□□□□ -0.26
AC089998.3-201ENST00000549715 RRBP1Q9P2E9 1410 aaKnown RBP13.39□□□□□ -0.27
AC089998.3-201ENST00000549715 TIAM1Q13009 1591 aa13.39□□□□□ -0.27
AC089998.3-201ENST00000549715 CASKIN1Q8WXD9 1431 aa13.39□□□□□ -0.27
AC089998.3-201ENST00000549715 CFAP43Q8NDM7 1665 aa13.37□□□□□ -0.27
AC089998.3-201ENST00000549715 ERCC6Q03468 1493 aa13.34□□□□□ -0.27
AC089998.3-201ENST00000549715 MAGI1Q96QZ7 1491 aaPredicted RBP13.34□□□□□ -0.27
AC089998.3-201ENST00000549715 LRRC9Q6ZRR7 1453 aa13.32□□□□□ -0.28
AC089998.3-201ENST00000549715 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.32□□□□□ -0.28
AC089998.3-201ENST00000549715 UGGT2Q9NYU1 1516 aa13.31□□□□□ -0.28
AC089998.3-201ENST00000549715 PPARGC1BQ86YN6 1023 aaKnown RBP13.31□□□□□ -0.28
AC089998.3-201ENST00000549715 IQGAP2Q13576 1575 aa13.31□□□□□ -0.28
AC089998.3-201ENST00000549715 SNAPC4Q5SXM2 1469 aa13.3□□□□□ -0.28
AC089998.3-201ENST00000549715 PCF11O94913 1555 aaKnown RBP13.3□□□□□ -0.28
AC089998.3-201ENST00000549715 CLSPNQ9HAW4 1339 aa13.29□□□□□ -0.28
AC089998.3-201ENST00000549715 KIAA0586Q9BVV6 1533 aa13.29□□□□□ -0.28
AC089998.3-201ENST00000549715 EIF4G3O43432 1585 aaKnown RBP13.28□□□□□ -0.28
AC089998.3-201ENST00000549715 FHOD3Q2V2M9 1422 aa13.26□□□□□ -0.29
AC089998.3-201ENST00000549715 CCDC18Q5T9S5 1454 aa13.26□□□□□ -0.29
AC089998.3-201ENST00000549715 CCNB3Q8WWL7 1395 aa13.26□□□□□ -0.29
AC089998.3-201ENST00000549715 ZNF608Q9ULD9 1512 aaPredicted RBP13.25□□□□□ -0.29
AC089998.3-201ENST00000549715 SYNJ2O15056 1496 aa13.24□□□□□ -0.29
AC089998.3-201ENST00000549715 GRIN2AQ12879 1464 aa13.24□□□□□ -0.29
AC089998.3-201ENST00000549715 KANK4Q5T7N3 995 aaPredicted RBP13.24□□□□□ -0.29
AC089998.3-201ENST00000549715 RANGAP1P46060 587 aaPredicted RBP13.22□□□□□ -0.29
AC089998.3-201ENST00000549715 CCER1Q8TC90 406 aaPredicted RBP13.22□□□□□ -0.29
AC089998.3-201ENST00000549715 NUP160Q12769 1436 aa13.2□□□□□ -0.3
AC089998.3-201ENST00000549715 HECW1Q76N89 1606 aa13.2□□□□□ -0.3
AC089998.3-201ENST00000549715 EHBP1L1Q8N3D4 1523 aa13.19□□□□□ -0.3
AC089998.3-201ENST00000549715 ARHGEF11O15085 1522 aa13.17□□□□□ -0.3
AC089998.3-201ENST00000549715 KIAA0556O60303 1618 aa13.16□□□□□ -0.3
AC089998.3-201ENST00000549715 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.15□□□□□ -0.3
AC089998.3-201ENST00000549715 DISP1Q96F81 1524 aa13.14□□□□□ -0.31
AC089998.3-201ENST00000549715 PHLDB1Q86UU1 1377 aa13.13□□□□□ -0.31
AC089998.3-201ENST00000549715 TTBK1Q5TCY1 1321 aaPredicted RBP13.13□□□□□ -0.31
AC089998.3-201ENST00000549715 SUPT6HQ7KZ85 1726 aaKnown RBP13.12□□□□□ -0.31
AC089998.3-201ENST00000549715 MTUS2Q5JR59 1369 aa13.11□□□□□ -0.31
AC089998.3-201ENST00000549715 FGD6Q6ZV73 1430 aa13.11□□□□□ -0.31
AC089998.3-201ENST00000549715 EPRSP07814 1512 aaKnown RBP13.1□□□□□ -0.31
AC089998.3-201ENST00000549715 CARMIL2Q6F5E8 1435 aa13.1□□□□□ -0.31
AC089998.3-201ENST00000549715 CEP170Q5SW79 1584 aa13.1□□□□□ -0.31
AC089998.3-201ENST00000549715 ACIN1Q9UKV3 1341 aaKnown RBP13.1□□□□□ -0.31
AC089998.3-201ENST00000549715 HNRNPUL2Q1KMD3 747 aaKnown RBP13.09□□□□□ -0.31
AC089998.3-201ENST00000549715 LRRIQ1Q96JM4 1722 aa13.09□□□□□ -0.31
AC089998.3-201ENST00000549715 MYOM3Q5VTT5 1437 aa13.08□□□□□ -0.32
AC089998.3-201ENST00000549715 MIA2Q96PC5 1412 aa13.08□□□□□ -0.32
AC089998.3-201ENST00000549715 NCOA2Q15596 1464 aa13.08□□□□□ -0.32
AC089998.3-201ENST00000549715 P3H3Q8IVL6 736 aa13.07□□□□□ -0.32
AC089998.3-201ENST00000549715 CHMP7Q8WUX9 453 aaPredicted RBP13.07□□□□□ -0.32
AC089998.3-201ENST00000549715 TCOF1Q13428 1488 aaKnown RBP13.07□□□□□ -0.32
AC089998.3-201ENST00000549715 AKNAQ7Z591 1439 aa13.06□□□□□ -0.32
AC089998.3-201ENST00000549715 DHX57Q6P158 1386 aaKnown RBP13.06□□□□□ -0.32
AC089998.3-201ENST00000549715 RAPGEF6Q8TEU7 1601 aa13.06□□□□□ -0.32
AC089998.3-201ENST00000549715 SETD5Q9C0A6 1442 aa13.05□□□□□ -0.32
AC089998.3-201ENST00000549715 MSH5O43196 834 aa13.02□□□□□ -0.33
AC089998.3-201ENST00000549715 NUP153P49790 1475 aaKnown RBP13.02□□□□□ -0.33
AC089998.3-201ENST00000549715 CDK11AQ9UQ88 783 aaPredicted RBP13.01□□□□□ -0.33
AC089998.3-201ENST00000549715 HFM1A2PYH4 1435 aa13.01□□□□□ -0.33
AC089998.3-201ENST00000549715 MAGI3Q5TCQ9 1506 aa13.01□□□□□ -0.33
AC089998.3-201ENST00000549715 TIMELESSQ9UNS1 1208 aa12.99□□□□□ -0.33
AC089998.3-201ENST00000549715 SHROOM2Q13796 1616 aa12.99□□□□□ -0.33
AC089998.3-201ENST00000549715 ADCY10Q96PN6 1610 aa12.99□□□□□ -0.33
AC089998.3-201ENST00000549715 ABCA8O94911 1581 aa12.98□□□□□ -0.33
AC089998.3-201ENST00000549715 RAB3GAP2Q9H2M9 1393 aa12.98□□□□□ -0.33
AC089998.3-201ENST00000549715 JPH4Q96JJ6 628 aa12.98□□□□□ -0.33
AC089998.3-201ENST00000549715 PTPN23Q9H3S7 1636 aa12.98□□□□□ -0.33
AC089998.3-201ENST00000549715 TROQ12816 1431 aaPredicted RBP12.96□□□□□ -0.33
AC089998.3-201ENST00000549715 ATP1B4Q9UN42 357 aaPredicted RBP12.96□□□□□ -0.33
AC089998.3-201ENST00000549715 CDK13Q14004 1512 aaKnown RBP12.94□□□□□ -0.34
AC089998.3-201ENST00000549715 PPP4R3CPQ6ZMV5 832 aa12.94□□□□□ -0.34
AC089998.3-201ENST00000549715 ROCK1Q13464 1354 aa12.94□□□□□ -0.34
AC089998.3-201ENST00000549715 FAM50AQ14320 339 aaKnown RBP12.92□□□□□ -0.34
AC089998.3-201ENST00000549715 ITSN2Q9NZM3 1697 aa12.92□□□□□ -0.34
AC089998.3-201ENST00000549715 UACAQ9BZF9 1416 aa12.91□□□□□ -0.34
AC089998.3-201ENST00000549715 MAPKBP1O60336 1514 aa12.91□□□□□ -0.34
AC089998.3-201ENST00000549715 GCC2Q8IWJ2 1684 aa12.9□□□□□ -0.34
AC089998.3-201ENST00000549715 NAIPQ13075 1403 aa12.89□□□□□ -0.35
AC089998.3-201ENST00000549715 CHD1O14646 1710 aa12.89□□□□□ -0.35
AC089998.3-201ENST00000549715 KCNA4P22459 653 aa12.88□□□□□ -0.35
AC089998.3-201ENST00000549715 PLB1Q6P1J6 1458 aa12.88□□□□□ -0.35
AC089998.3-201ENST00000549715 DNMT1P26358 1616 aaKnown RBP12.88□□□□□ -0.35
AC089998.3-201ENST00000549715 CLASP1Q7Z460 1538 aa12.88□□□□□ -0.35
AC089998.3-201ENST00000549715 PRG4Q92954 1404 aaPredicted RBP12.88□□□□□ -0.35
AC089998.3-201ENST00000549715 ZNF316A6NFI3 1004 aaPredicted RBP12.87□□□□□ -0.35
AC089998.3-201ENST00000549715 PTPRKQ15262 1439 aa12.87□□□□□ -0.35
AC089998.3-201ENST00000549715 PTPRGP23470 1445 aa12.86□□□□□ -0.35
AC089998.3-201ENST00000549715 KIF14Q15058 1648 aa12.85□□□□□ -0.35
AC089998.3-201ENST00000549715 FBLN2P98095 1184 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms