RNA–Protein interactions for RNA: ENST00000549715.1

AC089998.3-201, humanhuman

BASIC

Gene AC089998.3, Length 493 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC089998.3-201ENST00000549715 NISCHQ9Y2I1 1504 aa19.47■□□□□ 0.71
AC089998.3-201ENST00000549715 CHIC1Q5VXU3 224 aa17.85■□□□□ 0.45
AC089998.3-201ENST00000549715 AEBP2Q6ZN18 517 aaPredicted RBP17.84■□□□□ 0.45
AC089998.3-201ENST00000549715 CCDC180Q9P1Z9 1646 aa16.97■□□□□ 0.31
AC089998.3-201ENST00000549715 ZCCHC6Q5VYS8 1495 aaKnown RBP16.44■□□□□ 0.22
AC089998.3-201ENST00000549715 DCAF1Q9Y4B6 1507 aa16.3■□□□□ 0.2
AC089998.3-201ENST00000549715 MYO15BQ96JP2 1530 aa16.07■□□□□ 0.16
AC089998.3-201ENST00000549715 NACADO15069 1562 aa15.74■□□□□ 0.11
AC089998.3-201ENST00000549715 SHROOM4Q9ULL8 1493 aa15.68■□□□□ 0.1
AC089998.3-201ENST00000549715 DCAF8L2P0C7V8 631 aa15.61■□□□□ 0.09
AC089998.3-201ENST00000549715 PHF23Q9BUL5 403 aaPredicted RBP15.6■□□□□ 0.09
AC089998.3-201ENST00000549715 ABCC9O60706 1549 aa15.51■□□□□ 0.07
AC089998.3-201ENST00000549715 RB1CC1Q8TDY2 1594 aa15.49■□□□□ 0.07
AC089998.3-201ENST00000549715 SCRIBQ14160 1630 aa15.37■□□□□ 0.05
AC089998.3-201ENST00000549715 SENP3Q9H4L4 574 aaPredicted RBP15.32■□□□□ 0.04
AC089998.3-201ENST00000549715 SUPT5HO00267 1087 aaKnown RBP15.25■□□□□ 0.03
AC089998.3-201ENST00000549715 RSF1Q96T23 1441 aaPredicted RBP15.15■□□□□ 0.02
AC089998.3-201ENST00000549715 BAZ1AQ9NRL2 1556 aaPredicted RBP15.06■□□□□ 0
AC089998.3-201ENST00000549715 UNC13AQ9UPW8 1703 aa15.03■□□□□ -0
AC089998.3-201ENST00000549715 CECR2Q9BXF3 1484 aa14.96□□□□□ -0.01
AC089998.3-201ENST00000549715 MROH2BQ7Z745 1585 aa14.95□□□□□ -0.02
AC089998.3-201ENST00000549715 BICRAQ9NZM4 1560 aa14.94□□□□□ -0.02
AC089998.3-201ENST00000549715 SMARCA4P51532 1647 aa14.89□□□□□ -0.03
AC089998.3-201ENST00000549715 PEG3Q9GZU2 1588 aa14.85□□□□□ -0.03
AC089998.3-201ENST00000549715 TOP2AP11388 1531 aaKnown RBP14.81□□□□□ -0.04
AC089998.3-201ENST00000549715 WIZO95785 1651 aa14.79□□□□□ -0.04
AC089998.3-201ENST00000549715 PLPPR3Q6T4P5 718 aa14.72□□□□□ -0.05
AC089998.3-201ENST00000549715 SMARCA2P51531 1590 aa14.67□□□□□ -0.06
AC089998.3-201ENST00000549715 EIF4G1Q04637 1599 aaKnown RBP14.65□□□□□ -0.06
AC089998.3-201ENST00000549715 ATAD2BQ9ULI0 1458 aa14.59□□□□□ -0.07
AC089998.3-201ENST00000549715 PABPN1Q86U42 306 aaKnown RBP eCLIP14.59□□□□□ -0.07
AC089998.3-201ENST00000549715 CCDC88BA6NC98 1476 aa14.57□□□□□ -0.08
AC089998.3-201ENST00000549715 HMGXB3Q12766 1538 aa14.53□□□□□ -0.08
AC089998.3-201ENST00000549715 NCAPD3P42695 1498 aa14.5□□□□□ -0.09
AC089998.3-201ENST00000549715 BAZ1BQ9UIG0 1483 aaKnown RBP14.5□□□□□ -0.09
AC089998.3-201ENST00000549715 TRIM41Q8WV44 630 aa14.47□□□□□ -0.09
AC089998.3-201ENST00000549715 EEA1Q15075 1411 aa14.35□□□□□ -0.11
AC089998.3-201ENST00000549715 WRNQ14191 1432 aaPredicted RBP eCLIP14.25□□□□□ -0.13
AC089998.3-201ENST00000549715 CFTRP13569 1480 aa14.23□□□□□ -0.13
AC089998.3-201ENST00000549715 ABCC8Q09428 1581 aa14.22□□□□□ -0.13
AC089998.3-201ENST00000549715 TOP2BQ02880 1626 aa14.16□□□□□ -0.14
AC089998.3-201ENST00000549715 BIVM-ERCC5R4GMW8 1640 aa14.15□□□□□ -0.14
AC089998.3-201ENST00000549715 PRDM2Q13029 1718 aa14.15□□□□□ -0.14
AC089998.3-201ENST00000549715 LOC105371045A0A1W2PR82 267 aa14.15□□□□□ -0.14
AC089998.3-201ENST00000549715 CC2D2AQ9P2K1 1620 aa14.15□□□□□ -0.14
AC089998.3-201ENST00000549715 SYNJ1O43426 1573 aa14.13□□□□□ -0.15
AC089998.3-201ENST00000549715 CADPSQ9ULU8 1353 aa14.09□□□□□ -0.15
AC089998.3-201ENST00000549715 KIF21BO75037 1637 aa14.07□□□□□ -0.16
AC089998.3-201ENST00000549715 TNIKQ9UKE5 1360 aa14.05□□□□□ -0.16
AC089998.3-201ENST00000549715 FOXD1Q16676 465 aa14.04□□□□□ -0.16
AC089998.3-201ENST00000549715 CSRNP3Q8WYN3 585 aa14.04□□□□□ -0.16
AC089998.3-201ENST00000549715 SOGA1O94964 1423 aa14.04□□□□□ -0.16
AC089998.3-201ENST00000549715 GOLGA3Q08378 1498 aa14.03□□□□□ -0.16
AC089998.3-201ENST00000549715 CEP164Q9UPV0 1460 aa14.03□□□□□ -0.16
AC089998.3-201ENST00000549715 CUX1P39880 1505 aa13.99□□□□□ -0.17
AC089998.3-201ENST00000549715 FAM9AQ8IZU1 332 aaPredicted RBP13.98□□□□□ -0.17
AC089998.3-201ENST00000549715 ERICH3Q5RHP9 1530 aa13.97□□□□□ -0.17
AC089998.3-201ENST00000549715 LAMC3Q9Y6N6 1575 aa13.96□□□□□ -0.18
AC089998.3-201ENST00000549715 TRIM26Q12899 539 aaPredicted RBP13.93□□□□□ -0.18
AC089998.3-201ENST00000549715 RUSC2Q8N2Y8 1516 aa13.92□□□□□ -0.18
AC089998.3-201ENST00000549715 CEP162Q5TB80 1403 aa13.91□□□□□ -0.18
AC089998.3-201ENST00000549715 KIF27Q86VH2 1401 aa13.91□□□□□ -0.18
AC089998.3-201ENST00000549715 PRXQ9BXM0 1461 aa13.91□□□□□ -0.18
AC089998.3-201ENST00000549715 FANCD2Q9BXW9 1451 aa13.88□□□□□ -0.19
AC089998.3-201ENST00000549715 DNMBPQ6XZF7 1577 aa13.87□□□□□ -0.19
AC089998.3-201ENST00000549715 PDS5BQ9NTI5 1447 aa13.82□□□□□ -0.2
AC089998.3-201ENST00000549715 PCGF6Q9BYE7 350 aa13.79□□□□□ -0.2
AC089998.3-201ENST00000549715 FGD5Q6ZNL6 1462 aa13.79□□□□□ -0.2
AC089998.3-201ENST00000549715 RAPGEF2Q9Y4G8 1499 aa13.79□□□□□ -0.2
AC089998.3-201ENST00000549715 ABCA10Q8WWZ4 1543 aa13.79□□□□□ -0.2
AC089998.3-201ENST00000549715 UBTFP17480 764 aaKnown RBP13.77□□□□□ -0.21
AC089998.3-201ENST00000549715 TOPBP1Q92547 1522 aa13.77□□□□□ -0.21
AC089998.3-201ENST00000549715 CLIP1P30622 1438 aa13.75□□□□□ -0.21
AC089998.3-201ENST00000549715 HRCP23327 699 aa13.75□□□□□ -0.21
AC089998.3-201ENST00000549715 CUX2O14529 1486 aa13.73□□□□□ -0.21
AC089998.3-201ENST00000549715 VPS8Q8N3P4 1428 aa13.73□□□□□ -0.21
AC089998.3-201ENST00000549715 IGF1RP08069 1367 aa13.72□□□□□ -0.21
AC089998.3-201ENST00000549715 ADRA2BP18089 450 aa13.72□□□□□ -0.21
AC089998.3-201ENST00000549715 POLA1P09884 1462 aaPredicted RBP13.72□□□□□ -0.21
AC089998.3-201ENST00000549715 NESP48681 1621 aa13.69□□□□□ -0.22
AC089998.3-201ENST00000549715 CUL7Q14999 1698 aa13.69□□□□□ -0.22
AC089998.3-201ENST00000549715 WDR97A6NE52 1622 aa13.68□□□□□ -0.22
AC089998.3-201ENST00000549715 URB2Q14146 1524 aaKnown RBP13.67□□□□□ -0.22
AC089998.3-201ENST00000549715 PPP6R1Q9UPN7 881 aa13.66□□□□□ -0.22
AC089998.3-201ENST00000549715 CARMIL1Q5VZK9 1371 aa13.64□□□□□ -0.23
AC089998.3-201ENST00000549715 ZEB1P37275 1124 aaPredicted RBP13.63□□□□□ -0.23
AC089998.3-201ENST00000549715 ABCA5Q8WWZ7 1642 aa13.62□□□□□ -0.23
AC089998.3-201ENST00000549715 EHMT2Q96KQ7 1210 aa13.6□□□□□ -0.23
AC089998.3-201ENST00000549715 MRC2Q9UBG0 1479 aa13.6□□□□□ -0.23
AC089998.3-201ENST00000549715 MAP3K1Q13233 1512 aa13.59□□□□□ -0.23
AC089998.3-201ENST00000549715 ARAP1Q96P48 1450 aa13.58□□□□□ -0.24
AC089998.3-201ENST00000549715 KIF21AQ7Z4S6 1674 aa13.58□□□□□ -0.24
AC089998.3-201ENST00000549715 EFCAB5A4FU69 1503 aa13.57□□□□□ -0.24
AC089998.3-201ENST00000549715 TARBP1Q13395 1621 aaKnown RBP13.57□□□□□ -0.24
AC089998.3-201ENST00000549715 RAD54L2Q9Y4B4 1467 aa13.55□□□□□ -0.24
AC089998.3-201ENST00000549715 WDR62O43379 1518 aa13.55□□□□□ -0.24
AC089998.3-201ENST00000549715 ARHGAP35Q9NRY4 1499 aa13.55□□□□□ -0.24
AC089998.3-201ENST00000549715 GAPVD1Q14C86 1478 aa13.54□□□□□ -0.24
AC089998.3-201ENST00000549715 FHAD1B1AJZ9 1412 aa13.51□□□□□ -0.25
AC089998.3-201ENST00000549715 IFT140Q96RY7 1462 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 114.1 ms