RNA–Protein interactions for RNA: ENST00000549209.5

SMARCC2-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 5

Gene SMARCC2, Length 439 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-206ENST00000549209 CEP170Q5SW79 1584 aa14.39□□□□□ -0.11
SMARCC2-206ENST00000549209 ARAP1Q96P48 1450 aa14.39□□□□□ -0.11
SMARCC2-206ENST00000549209 CYB5RLQ6IPT4 315 aa14.35□□□□□ -0.11
SMARCC2-206ENST00000549209 RUSC2Q8N2Y8 1516 aa14.34□□□□□ -0.11
SMARCC2-206ENST00000549209 CARMIL1Q5VZK9 1371 aa14.32□□□□□ -0.12
SMARCC2-206ENST00000549209 SHROOM2Q13796 1616 aa14.31□□□□□ -0.12
SMARCC2-206ENST00000549209 ERCC6L2Q5T890 1561 aa14.3□□□□□ -0.12
SMARCC2-206ENST00000549209 CUL7Q14999 1698 aa14.3□□□□□ -0.12
SMARCC2-206ENST00000549209 JPH4Q96JJ6 628 aa14.27□□□□□ -0.13
SMARCC2-206ENST00000549209 KIAA0586Q9BVV6 1533 aa14.26□□□□□ -0.13
SMARCC2-206ENST00000549209 PRG4Q92954 1404 aaPredicted RBP14.24□□□□□ -0.13
SMARCC2-206ENST00000549209 PRXQ9BXM0 1461 aa14.21□□□□□ -0.13
SMARCC2-206ENST00000549209 RAPGEF2Q9Y4G8 1499 aa14.21□□□□□ -0.13
SMARCC2-206ENST00000549209 CSRNP3Q8WYN3 585 aa14.12□□□□□ -0.15
SMARCC2-206ENST00000549209 IQGAP2Q13576 1575 aa14.12□□□□□ -0.15
SMARCC2-206ENST00000549209 DISP1Q96F81 1524 aa14.1□□□□□ -0.15
SMARCC2-206ENST00000549209 EEA1Q15075 1411 aa14.1□□□□□ -0.15
SMARCC2-206ENST00000549209 UGGT2Q9NYU1 1516 aa14.1□□□□□ -0.15
SMARCC2-206ENST00000549209 PTPRGP23470 1445 aa14.06□□□□□ -0.16
SMARCC2-206ENST00000549209 PIAS4Q8N2W9 510 aaPredicted RBP14.05□□□□□ -0.16
SMARCC2-206ENST00000549209 TNIKQ9UKE5 1360 aa14.05□□□□□ -0.16
SMARCC2-206ENST00000549209 CARMIL2Q6F5E8 1435 aa14.05□□□□□ -0.16
SMARCC2-206ENST00000549209 ADCY10Q96PN6 1610 aa14.02□□□□□ -0.16
SMARCC2-206ENST00000549209 TRHP20396 242 aaPredicted RBP14□□□□□ -0.17
SMARCC2-206ENST00000549209 FAM9AQ8IZU1 332 aaPredicted RBP13.99□□□□□ -0.17
SMARCC2-206ENST00000549209 KIAA0556O60303 1618 aa13.99□□□□□ -0.17
SMARCC2-206ENST00000549209 UHRF1BP1LA0JNW5 1464 aa13.99□□□□□ -0.17
SMARCC2-206ENST00000549209 CTTNBP2Q8WZ74 1663 aa13.97□□□□□ -0.17
SMARCC2-206ENST00000549209 MAPKBP1O60336 1514 aa13.96□□□□□ -0.17
SMARCC2-206ENST00000549209 UACAQ9BZF9 1416 aa13.96□□□□□ -0.18
SMARCC2-206ENST00000549209 GOLGA3Q08378 1498 aa13.95□□□□□ -0.18
SMARCC2-206ENST00000549209 KIF21BO75037 1637 aa13.95□□□□□ -0.18
SMARCC2-206ENST00000549209 ABCC2Q92887 1545 aa13.95□□□□□ -0.18
SMARCC2-206ENST00000549209 TTBK1Q5TCY1 1321 aaPredicted RBP13.92□□□□□ -0.18
SMARCC2-206ENST00000549209 KDM5BQ9UGL1 1544 aa13.92□□□□□ -0.18
SMARCC2-206ENST00000549209 ABCC10Q5T3U5 1492 aa13.92□□□□□ -0.18
SMARCC2-206ENST00000549209 NPM1P06748 294 aaKnown RBP eCLIP13.91□□□□□ -0.18
SMARCC2-206ENST00000549209 PLB1Q6P1J6 1458 aa13.91□□□□□ -0.18
SMARCC2-206ENST00000549209 SAMD9Q5K651 1589 aa13.9□□□□□ -0.18
SMARCC2-206ENST00000549209 ABCA8O94911 1581 aa13.89□□□□□ -0.19
SMARCC2-206ENST00000549209 P3H3Q8IVL6 736 aa13.86□□□□□ -0.19
SMARCC2-206ENST00000549209 ASXL2Q76L83 1435 aa13.86□□□□□ -0.19
SMARCC2-206ENST00000549209 DIP2BQ9P265 1576 aa13.86□□□□□ -0.19
SMARCC2-206ENST00000549209 FAM69CQ0P6D2 419 aa13.85□□□□□ -0.19
SMARCC2-206ENST00000549209 KIF13AQ9H1H9 1805 aa13.84□□□□□ -0.19
SMARCC2-206ENST00000549209 FHOD3Q2V2M9 1422 aa13.81□□□□□ -0.2
SMARCC2-206ENST00000549209 ZCCHC11Q5TAX3 1644 aaKnown RBP13.8□□□□□ -0.2
SMARCC2-206ENST00000549209 UBTFP17480 764 aaKnown RBP13.8□□□□□ -0.2
SMARCC2-206ENST00000549209 ATP10BO94823 1461 aa13.8□□□□□ -0.2
SMARCC2-206ENST00000549209 EFCAB5A4FU69 1503 aa13.8□□□□□ -0.2
SMARCC2-206ENST00000549209 GLI2P10070 1586 aa13.79□□□□□ -0.2
SMARCC2-206ENST00000549209 EPRSP07814 1512 aaKnown RBP13.79□□□□□ -0.2
SMARCC2-206ENST00000549209 RANGAP1P46060 587 aaPredicted RBP13.78□□□□□ -0.2
SMARCC2-206ENST00000549209 EHMT2Q96KQ7 1210 aa13.78□□□□□ -0.2
SMARCC2-206ENST00000549209 NUP153P49790 1475 aaKnown RBP13.77□□□□□ -0.21
SMARCC2-206ENST00000549209 ARHGAP35Q9NRY4 1499 aa13.77□□□□□ -0.21
SMARCC2-206ENST00000549209 WDR7Q9Y4E6 1490 aa13.77□□□□□ -0.21
SMARCC2-206ENST00000549209 RAPGEF6Q8TEU7 1601 aa13.73□□□□□ -0.21
SMARCC2-206ENST00000549209 ARID3CA6NKF2 412 aa13.71□□□□□ -0.21
SMARCC2-206ENST00000549209 PPRC1Q5VV67 1664 aaKnown RBP13.7□□□□□ -0.22
SMARCC2-206ENST00000549209 MAP3K4Q9Y6R4 1608 aa13.7□□□□□ -0.22
SMARCC2-206ENST00000549209 FMN1Q68DA7 1419 aa13.67□□□□□ -0.22
SMARCC2-206ENST00000549209 KCNH8Q96L42 1107 aa13.67□□□□□ -0.22
SMARCC2-206ENST00000549209 COL17A1Q9UMD9 1497 aaPredicted RBP13.67□□□□□ -0.22
SMARCC2-206ENST00000549209 MAGI3Q5TCQ9 1506 aa13.65□□□□□ -0.22
SMARCC2-206ENST00000549209 CD109Q6YHK3 1445 aa13.64□□□□□ -0.23
SMARCC2-206ENST00000549209 CLIP1P30622 1438 aa13.63□□□□□ -0.23
SMARCC2-206ENST00000549209 CDK13Q14004 1512 aaKnown RBP13.62□□□□□ -0.23
SMARCC2-206ENST00000549209 TEX14Q8IWB6 1497 aa13.61□□□□□ -0.23
SMARCC2-206ENST00000549209 TSPOAP1O95153 1857 aa13.61□□□□□ -0.23
SMARCC2-206ENST00000549209 ABCA9Q8IUA7 1624 aa13.61□□□□□ -0.23
SMARCC2-206ENST00000549209 CASKIN1Q8WXD9 1431 aa13.6□□□□□ -0.23
SMARCC2-206ENST00000549209 CFAP43Q8NDM7 1665 aa13.59□□□□□ -0.23
SMARCC2-206ENST00000549209 PLEKHD1A6NEE1 506 aa13.59□□□□□ -0.23
SMARCC2-206ENST00000549209 KDM6BO15054 1643 aa13.59□□□□□ -0.23
SMARCC2-206ENST00000549209 LOC105371045A0A1W2PR82 267 aa13.58□□□□□ -0.24
SMARCC2-206ENST00000549209 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.58□□□□□ -0.24
SMARCC2-206ENST00000549209 HNRNPUL2Q1KMD3 747 aaKnown RBP13.58□□□□□ -0.24
SMARCC2-206ENST00000549209 HECW1Q76N89 1606 aa13.57□□□□□ -0.24
SMARCC2-206ENST00000549209 MSH5O43196 834 aa13.56□□□□□ -0.24
SMARCC2-206ENST00000549209 CEP162Q5TB80 1403 aa13.56□□□□□ -0.24
SMARCC2-206ENST00000549209 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.54□□□□□ -0.24
SMARCC2-206ENST00000549209 ARAP3Q8WWN8 1544 aa13.54□□□□□ -0.24
SMARCC2-206ENST00000549209 PCF11O94913 1555 aaKnown RBP13.54□□□□□ -0.24
SMARCC2-206ENST00000549209 PHLDB1Q86UU1 1377 aa13.53□□□□□ -0.24
SMARCC2-206ENST00000549209 FYCO1Q9BQS8 1478 aa13.53□□□□□ -0.24
SMARCC2-206ENST00000549209 LRRIQ1Q96JM4 1722 aa13.53□□□□□ -0.24
SMARCC2-206ENST00000549209 ATP1B4Q9UN42 357 aaPredicted RBP13.52□□□□□ -0.25
SMARCC2-206ENST00000549209 TROQ12816 1431 aaPredicted RBP13.52□□□□□ -0.25
SMARCC2-206ENST00000549209 NEO1Q92859 1461 aa13.52□□□□□ -0.25
SMARCC2-206ENST00000549209 TTC37Q6PGP7 1564 aa13.51□□□□□ -0.25
SMARCC2-206ENST00000549209 CCDC18Q5T9S5 1454 aa13.5□□□□□ -0.25
SMARCC2-206ENST00000549209 CDK11AQ9UQ88 783 aaPredicted RBP13.5□□□□□ -0.25
SMARCC2-206ENST00000549209 PLCH2O75038 1416 aa13.49□□□□□ -0.25
SMARCC2-206ENST00000549209 KIF14Q15058 1648 aa13.47□□□□□ -0.25
SMARCC2-206ENST00000549209 RAPGEF3O95398 923 aa13.46□□□□□ -0.25
SMARCC2-206ENST00000549209 FANCAO15360 1455 aa13.46□□□□□ -0.25
SMARCC2-206ENST00000549209 AKNAQ7Z591 1439 aa13.46□□□□□ -0.26
SMARCC2-206ENST00000549209 KDM4FA0A1W2PPD8 638 aa13.45□□□□□ -0.26
SMARCC2-206ENST00000549209 FRMPD1Q5SYB0 1578 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms