RNA–Protein interactions for RNA: ENST00000548823.1

CTDSP2-204, Transcript of CTD small phosphatase 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSP2, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-204ENST00000548823 NPM1P06748 294 aaKnown RBP eCLIP34.8■■■■□ 3.16
CTDSP2-204ENST00000548823 MAPKBP1O60336 1514 aa34.78■■■■□ 3.16
CTDSP2-204ENST00000548823 DIP2BQ9P265 1576 aa34.74■■■■□ 3.15
CTDSP2-204ENST00000548823 ILDR1Q86SU0 546 aaPredicted RBP34.74■■■■□ 3.15
CTDSP2-204ENST00000548823 TOP2BQ02880 1626 aa34.7■■■■□ 3.15
CTDSP2-204ENST00000548823 BIVM-ERCC5R4GMW8 1640 aa34.7■■■■□ 3.15
CTDSP2-204ENST00000548823 KDM6BO15054 1643 aa34.7■■■■□ 3.14
CTDSP2-204ENST00000548823 ADCY10Q96PN6 1610 aa34.62■■■■□ 3.13
CTDSP2-204ENST00000548823 SUPT5HO00267 1087 aaKnown RBP34.61■■■■□ 3.13
CTDSP2-204ENST00000548823 RUSC2Q8N2Y8 1516 aa34.59■■■■□ 3.13
CTDSP2-204ENST00000548823 TSPOAP1O95153 1857 aa34.54■■■■□ 3.12
CTDSP2-204ENST00000548823 KIAA0586Q9BVV6 1533 aa34.36■■■■□ 3.09
CTDSP2-204ENST00000548823 ADGRL1O94910 1474 aa34.27■■■■□ 3.08
CTDSP2-204ENST00000548823 PTPRGP23470 1445 aa34.23■■■■□ 3.07
CTDSP2-204ENST00000548823 PPRC1Q5VV67 1664 aaKnown RBP34.2■■■■□ 3.07
CTDSP2-204ENST00000548823 GLI2P10070 1586 aa34.18■■■■□ 3.06
CTDSP2-204ENST00000548823 ABCC2Q92887 1545 aa34.17■■■■□ 3.06
CTDSP2-204ENST00000548823 PLB1Q6P1J6 1458 aa34.16■■■■□ 3.06
CTDSP2-204ENST00000548823 ASXL2Q76L83 1435 aa34.16■■■■□ 3.06
CTDSP2-204ENST00000548823 IGF1RP08069 1367 aa34.14■■■■□ 3.06
CTDSP2-204ENST00000548823 HECW2Q9P2P5 1572 aa34.11■■■■□ 3.05
CTDSP2-204ENST00000548823 CUL7Q14999 1698 aa34.11■■■■□ 3.05
CTDSP2-204ENST00000548823 TNIKQ9UKE5 1360 aa34.09■■■■□ 3.05
CTDSP2-204ENST00000548823 TTBK1Q5TCY1 1321 aaPredicted RBP34.09■■■■□ 3.05
CTDSP2-204ENST00000548823 CARMIL2Q6F5E8 1435 aa34.06■■■■□ 3.04
CTDSP2-204ENST00000548823 COL17A1Q9UMD9 1497 aaPredicted RBP34.05■■■■□ 3.04
CTDSP2-204ENST00000548823 UHRF1BP1LA0JNW5 1464 aa34.02■■■■□ 3.04
CTDSP2-204ENST00000548823 KIF27Q86VH2 1401 aa34.02■■■■□ 3.04
CTDSP2-204ENST00000548823 MAP3K4Q9Y6R4 1608 aa33.95■■■■□ 3.02
CTDSP2-204ENST00000548823 TEX14Q8IWB6 1497 aa33.95■■■■□ 3.02
CTDSP2-204ENST00000548823 EPRSP07814 1512 aaKnown RBP33.94■■■■□ 3.02
CTDSP2-204ENST00000548823 UACAQ9BZF9 1416 aa33.93■■■■□ 3.02
CTDSP2-204ENST00000548823 CARMIL1Q5VZK9 1371 aa33.89■■■■□ 3.02
CTDSP2-204ENST00000548823 KDM5BQ9UGL1 1544 aa33.86■■■■□ 3.01
CTDSP2-204ENST00000548823 IQGAP2Q13576 1575 aa33.86■■■■□ 3.01
CTDSP2-204ENST00000548823 DISP1Q96F81 1524 aa33.79■■■■□ 3
CTDSP2-204ENST00000548823 ZCCHC11Q5TAX3 1644 aaKnown RBP33.76■■■□□ 2.99
CTDSP2-204ENST00000548823 FBXO41Q8TF61 875 aa33.74■■■□□ 2.99
CTDSP2-204ENST00000548823 WDR7Q9Y4E6 1490 aa33.66■■■□□ 2.98
CTDSP2-204ENST00000548823 UGGT2Q9NYU1 1516 aa33.63■■■□□ 2.97
CTDSP2-204ENST00000548823 MAGI3Q5TCQ9 1506 aa33.6■■■□□ 2.97
CTDSP2-204ENST00000548823 KIAA0556O60303 1618 aa33.57■■■□□ 2.96
CTDSP2-204ENST00000548823 CD109Q6YHK3 1445 aa33.57■■■□□ 2.96
CTDSP2-204ENST00000548823 CFAP43Q8NDM7 1665 aa33.55■■■□□ 2.96
CTDSP2-204ENST00000548823 KIF21BO75037 1637 aa33.5■■■□□ 2.95
CTDSP2-204ENST00000548823 KCNH8Q96L42 1107 aa33.47■■■□□ 2.95
CTDSP2-204ENST00000548823 RAPGEF2Q9Y4G8 1499 aa33.46■■■□□ 2.95
CTDSP2-204ENST00000548823 CHIC1Q5VXU3 224 aa33.39■■■□□ 2.94
CTDSP2-204ENST00000548823 ARAP3Q8WWN8 1544 aa33.37■■■□□ 2.93
CTDSP2-204ENST00000548823 PTPRMP28827 1452 aa33.36■■■□□ 2.93
CTDSP2-204ENST00000548823 ABCA8O94911 1581 aa33.33■■■□□ 2.93
CTDSP2-204ENST00000548823 ADAMTSL3P82987 1691 aa33.32■■■□□ 2.92
CTDSP2-204ENST00000548823 GOLGA3Q08378 1498 aa33.28■■■□□ 2.92
CTDSP2-204ENST00000548823 PHLDB1Q86UU1 1377 aa33.22■■■□□ 2.91
CTDSP2-204ENST00000548823 CTTNBP2Q8WZ74 1663 aa33.22■■■□□ 2.91
CTDSP2-204ENST00000548823 PCF11O94913 1555 aaKnown RBP33.2■■■□□ 2.91
CTDSP2-204ENST00000548823 BCORL1Q5H9F3 1711 aa33.14■■■□□ 2.9
CTDSP2-204ENST00000548823 LMTK3Q96Q04 1460 aa33.14■■■□□ 2.9
CTDSP2-204ENST00000548823 RAPGEF3O95398 923 aa33.12■■■□□ 2.89
CTDSP2-204ENST00000548823 ABCA9Q8IUA7 1624 aa33.1■■■□□ 2.89
CTDSP2-204ENST00000548823 MADDQ8WXG6 1647 aa33.1■■■□□ 2.89
CTDSP2-204ENST00000548823 ARID4BQ4LE39 1312 aaPredicted RBP33.08■■■□□ 2.89
CTDSP2-204ENST00000548823 ATP10BO94823 1461 aa33.06■■■□□ 2.88
CTDSP2-204ENST00000548823 FAM9AQ8IZU1 332 aaPredicted RBP33.06■■■□□ 2.88
CTDSP2-204ENST00000548823 NEO1Q92859 1461 aa33.06■■■□□ 2.88
CTDSP2-204ENST00000548823 ARID3CA6NKF2 412 aa33.03■■■□□ 2.88
CTDSP2-204ENST00000548823 FRMPD1Q5SYB0 1578 aa32.98■■■□□ 2.87
CTDSP2-204ENST00000548823 RIMS1Q86UR5 1692 aaKnown RBP32.95■■■□□ 2.87
CTDSP2-204ENST00000548823 HSPA2P54652 639 aa32.93■■■□□ 2.86
CTDSP2-204ENST00000548823 CERKQ8TCT0 537 aa32.93■■■□□ 2.86
CTDSP2-204ENST00000548823 ARHGEF40Q8TER5 1519 aa32.88■■■□□ 2.85
CTDSP2-204ENST00000548823 P3H3Q8IVL6 736 aa32.87■■■□□ 2.85
CTDSP2-204ENST00000548823 PRXQ9BXM0 1461 aa32.87■■■□□ 2.85
CTDSP2-204ENST00000548823 DENND4BO75064 1496 aaPredicted RBP32.81■■■□□ 2.84
CTDSP2-204ENST00000548823 POGZQ7Z3K3 1410 aa32.8■■■□□ 2.84
CTDSP2-204ENST00000548823 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.79■■■□□ 2.84
CTDSP2-204ENST00000548823 HNRNPUL2Q1KMD3 747 aaKnown RBP32.79■■■□□ 2.84
CTDSP2-204ENST00000548823 RICTORQ6R327 1708 aa32.79■■■□□ 2.84
CTDSP2-204ENST00000548823 RAPGEF6Q8TEU7 1601 aa32.78■■■□□ 2.84
CTDSP2-204ENST00000548823 PLPPR3Q6T4P5 718 aa32.78■■■□□ 2.84
CTDSP2-204ENST00000548823 SOCS7O14512 581 aa32.76■■■□□ 2.83
CTDSP2-204ENST00000548823 FANCAO15360 1455 aa32.76■■■□□ 2.83
CTDSP2-204ENST00000548823 FHOD3Q2V2M9 1422 aa32.76■■■□□ 2.83
CTDSP2-204ENST00000548823 DISP3Q9P2K9 1392 aa32.74■■■□□ 2.83
CTDSP2-204ENST00000548823 ILDR2Q71H61 639 aa32.74■■■□□ 2.83
CTDSP2-204ENST00000548823 AKNAQ7Z591 1439 aa32.74■■■□□ 2.83
CTDSP2-204ENST00000548823 SAMD9Q5K651 1589 aa32.7■■■□□ 2.83
CTDSP2-204ENST00000548823 ZMYM4Q5VZL5 1548 aa32.67■■■□□ 2.82
CTDSP2-204ENST00000548823 CFAP74Q9C0B2 1584 aa32.66■■■□□ 2.82
CTDSP2-204ENST00000548823 NUP153P49790 1475 aaKnown RBP32.65■■■□□ 2.82
CTDSP2-204ENST00000548823 SIGLEC1Q9BZZ2 1709 aa32.65■■■□□ 2.82
CTDSP2-204ENST00000548823 EFCAB5A4FU69 1503 aa32.65■■■□□ 2.82
CTDSP2-204ENST00000548823 ZFYVE16Q7Z3T8 1539 aa32.65■■■□□ 2.82
CTDSP2-204ENST00000548823 PLEKHD1A6NEE1 506 aa32.63■■■□□ 2.81
CTDSP2-204ENST00000548823 TTC37Q6PGP7 1564 aa32.62■■■□□ 2.81
CTDSP2-204ENST00000548823 MAGI2Q86UL8 1455 aa32.62■■■□□ 2.81
CTDSP2-204ENST00000548823 YEATS2Q9ULM3 1422 aa32.62■■■□□ 2.81
CTDSP2-204ENST00000548823 FER1L4A9Z1Z3 1794 aa32.62■■■□□ 2.81
CTDSP2-204ENST00000548823 MLECQ14165 292 aa32.59■■■□□ 2.81
CTDSP2-204ENST00000548823 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP32.55■■■□□ 2.82e-6■■■□□ 16.6
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms