RNA–Protein interactions for RNA: ENST00000548821.1

GCN1-205, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 504 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-205ENST00000548821 IGF1RP08069 1367 aa16.54■□□□□ 0.24
GCN1-205ENST00000548821 SHROOM2Q13796 1616 aa16.52■□□□□ 0.24
GCN1-205ENST00000548821 KIAA0586Q9BVV6 1533 aa16.5■□□□□ 0.23
GCN1-205ENST00000548821 CARMIL1Q5VZK9 1371 aa16.49■□□□□ 0.23
GCN1-205ENST00000548821 CUL7Q14999 1698 aa16.48■□□□□ 0.23
GCN1-205ENST00000548821 ERCC6L2Q5T890 1561 aa16.45■□□□□ 0.22
GCN1-205ENST00000548821 CARMIL2Q6F5E8 1435 aa16.45■□□□□ 0.22
GCN1-205ENST00000548821 RUSC2Q8N2Y8 1516 aa16.41■□□□□ 0.22
GCN1-205ENST00000548821 FAM9AQ8IZU1 332 aaPredicted RBP16.41■□□□□ 0.22
GCN1-205ENST00000548821 PTPRGP23470 1445 aa16.38■□□□□ 0.21
GCN1-205ENST00000548821 FAM69CQ0P6D2 419 aa16.37■□□□□ 0.21
GCN1-205ENST00000548821 TNIKQ9UKE5 1360 aa16.36■□□□□ 0.21
GCN1-205ENST00000548821 RAPGEF2Q9Y4G8 1499 aa16.33■□□□□ 0.2
GCN1-205ENST00000548821 MAPKBP1O60336 1514 aa16.3■□□□□ 0.2
GCN1-205ENST00000548821 ABCC10Q5T3U5 1492 aa16.3■□□□□ 0.2
GCN1-205ENST00000548821 TTBK1Q5TCY1 1321 aaPredicted RBP16.29■□□□□ 0.2
GCN1-205ENST00000548821 IQGAP2Q13576 1575 aa16.28■□□□□ 0.2
GCN1-205ENST00000548821 PLB1Q6P1J6 1458 aa16.22■□□□□ 0.19
GCN1-205ENST00000548821 UACAQ9BZF9 1416 aa16.22■□□□□ 0.19
GCN1-205ENST00000548821 ADCY10Q96PN6 1610 aa16.22■□□□□ 0.19
GCN1-205ENST00000548821 ABCC2Q92887 1545 aa16.21■□□□□ 0.19
GCN1-205ENST00000548821 UHRF1BP1LA0JNW5 1464 aa16.21■□□□□ 0.19
GCN1-205ENST00000548821 GOLGA3Q08378 1498 aa16.21■□□□□ 0.19
GCN1-205ENST00000548821 UGGT2Q9NYU1 1516 aa16.19■□□□□ 0.18
GCN1-205ENST00000548821 KIF13AQ9H1H9 1805 aa16.17■□□□□ 0.18
GCN1-205ENST00000548821 DIP2BQ9P265 1576 aa16.16■□□□□ 0.18
GCN1-205ENST00000548821 DISP1Q96F81 1524 aa16.15■□□□□ 0.18
GCN1-205ENST00000548821 ASXL2Q76L83 1435 aa16.14■□□□□ 0.17
GCN1-205ENST00000548821 CSRNP3Q8WYN3 585 aa16.14■□□□□ 0.17
GCN1-205ENST00000548821 EEA1Q15075 1411 aa16.11■□□□□ 0.17
GCN1-205ENST00000548821 PRXQ9BXM0 1461 aa16.1■□□□□ 0.17
GCN1-205ENST00000548821 KDM5BQ9UGL1 1544 aa16.1■□□□□ 0.17
GCN1-205ENST00000548821 GLI2P10070 1586 aa16.09■□□□□ 0.17
GCN1-205ENST00000548821 KIAA0556O60303 1618 aa16.08■□□□□ 0.17
GCN1-205ENST00000548821 TEX14Q8IWB6 1497 aa16.07■□□□□ 0.16
GCN1-205ENST00000548821 KDM6BO15054 1643 aa16.07■□□□□ 0.16
GCN1-205ENST00000548821 CTTNBP2Q8WZ74 1663 aa16.03■□□□□ 0.16
GCN1-205ENST00000548821 EPRSP07814 1512 aaKnown RBP16.02■□□□□ 0.15
GCN1-205ENST00000548821 WDR7Q9Y4E6 1490 aa16.01■□□□□ 0.15
GCN1-205ENST00000548821 KCNH8Q96L42 1107 aa16■□□□□ 0.15
GCN1-205ENST00000548821 TSPOAP1O95153 1857 aa15.99■□□□□ 0.15
GCN1-205ENST00000548821 ZCCHC11Q5TAX3 1644 aaKnown RBP15.97■□□□□ 0.15
GCN1-205ENST00000548821 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.96■□□□□ 0.15
GCN1-205ENST00000548821 HNRNPUL2Q1KMD3 747 aaKnown RBP15.96■□□□□ 0.15
GCN1-205ENST00000548821 P3H3Q8IVL6 736 aa15.96■□□□□ 0.15
GCN1-205ENST00000548821 CD109Q6YHK3 1445 aa15.95■□□□□ 0.14
GCN1-205ENST00000548821 ABCA8O94911 1581 aa15.94■□□□□ 0.14
GCN1-205ENST00000548821 PHLDB1Q86UU1 1377 aa15.93■□□□□ 0.14
GCN1-205ENST00000548821 MAP3K4Q9Y6R4 1608 aa15.91■□□□□ 0.14
GCN1-205ENST00000548821 MAGI3Q5TCQ9 1506 aa15.91■□□□□ 0.14
GCN1-205ENST00000548821 PLEKHD1A6NEE1 506 aa15.89■□□□□ 0.13
GCN1-205ENST00000548821 KDM4FA0A1W2PPD8 638 aa15.88■□□□□ 0.13
GCN1-205ENST00000548821 UBTFP17480 764 aaKnown RBP15.87■□□□□ 0.13
GCN1-205ENST00000548821 RANGAP1P46060 587 aaPredicted RBP15.87■□□□□ 0.13
GCN1-205ENST00000548821 CFAP43Q8NDM7 1665 aa15.86■□□□□ 0.13
GCN1-205ENST00000548821 ATP10BO94823 1461 aa15.86■□□□□ 0.13
GCN1-205ENST00000548821 ARID3CA6NKF2 412 aa15.84■□□□□ 0.13
GCN1-205ENST00000548821 PPRC1Q5VV67 1664 aaKnown RBP15.83■□□□□ 0.13
GCN1-205ENST00000548821 SAMD9Q5K651 1589 aa15.83■□□□□ 0.12
GCN1-205ENST00000548821 CDK11AQ9UQ88 783 aaPredicted RBP15.82■□□□□ 0.12
GCN1-205ENST00000548821 EFCAB5A4FU69 1503 aa15.81■□□□□ 0.12
GCN1-205ENST00000548821 COL17A1Q9UMD9 1497 aaPredicted RBP15.8■□□□□ 0.12
GCN1-205ENST00000548821 RAPGEF6Q8TEU7 1601 aa15.79■□□□□ 0.12
GCN1-205ENST00000548821 KIF21BO75037 1637 aa15.79■□□□□ 0.12
GCN1-205ENST00000548821 ARAP3Q8WWN8 1544 aa15.78■□□□□ 0.12
GCN1-205ENST00000548821 NEO1Q92859 1461 aa15.77■□□□□ 0.11
GCN1-205ENST00000548821 FHOD3Q2V2M9 1422 aa15.77■□□□□ 0.11
GCN1-205ENST00000548821 ADGRL1O94910 1474 aa15.76■□□□□ 0.11
GCN1-205ENST00000548821 FMN1Q68DA7 1419 aa15.76■□□□□ 0.11
GCN1-205ENST00000548821 ATP1B4Q9UN42 357 aaPredicted RBP15.74■□□□□ 0.11
GCN1-205ENST00000548821 NUP153P49790 1475 aaKnown RBP15.73■□□□□ 0.11
GCN1-205ENST00000548821 ABCA9Q8IUA7 1624 aa15.73■□□□□ 0.11
GCN1-205ENST00000548821 RAPGEF3O95398 923 aa15.68■□□□□ 0.1
GCN1-205ENST00000548821 ARID4BQ4LE39 1312 aaPredicted RBP15.68■□□□□ 0.1
GCN1-205ENST00000548821 EHMT2Q96KQ7 1210 aa15.67■□□□□ 0.1
GCN1-205ENST00000548821 DENND4BO75064 1496 aaPredicted RBP15.65■□□□□ 0.1
GCN1-205ENST00000548821 EFCAB2Q5VUJ9 269 aa15.65■□□□□ 0.1
GCN1-205ENST00000548821 AKNAQ7Z591 1439 aa15.64■□□□□ 0.09
GCN1-205ENST00000548821 CFAP74Q9C0B2 1584 aa15.64■□□□□ 0.09
GCN1-205ENST00000548821 FANCAO15360 1455 aa15.63■□□□□ 0.09
GCN1-205ENST00000548821 CLIP1P30622 1438 aa15.62■□□□□ 0.09
GCN1-205ENST00000548821 POGZQ7Z3K3 1410 aa15.62■□□□□ 0.09
GCN1-205ENST00000548821 HECW1Q76N89 1606 aa15.61■□□□□ 0.09
GCN1-205ENST00000548821 PLCH2O75038 1416 aa15.6■□□□□ 0.09
GCN1-205ENST00000548821 MAGI2Q86UL8 1455 aa15.59■□□□□ 0.09
GCN1-205ENST00000548821 ARHGAP35Q9NRY4 1499 aa15.59■□□□□ 0.09
GCN1-205ENST00000548821 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.58■□□□□ 0.08
GCN1-205ENST00000548821 TROQ12816 1431 aaPredicted RBP15.54■□□□□ 0.08
GCN1-205ENST00000548821 SCAPERQ9BY12 1400 aa15.54■□□□□ 0.08
GCN1-205ENST00000548821 MYT1LQ9UL68 1186 aa15.54■□□□□ 0.08
GCN1-205ENST00000548821 CDK13Q14004 1512 aaKnown RBP15.53■□□□□ 0.08
GCN1-205ENST00000548821 CCDC18Q5T9S5 1454 aa15.53■□□□□ 0.08
GCN1-205ENST00000548821 CASKIN1Q8WXD9 1431 aa15.51■□□□□ 0.07
GCN1-205ENST00000548821 PTPRMP28827 1452 aa15.5■□□□□ 0.07
GCN1-205ENST00000548821 KIF14Q15058 1648 aa15.5■□□□□ 0.07
GCN1-205ENST00000548821 TTC37Q6PGP7 1564 aa15.48■□□□□ 0.07
GCN1-205ENST00000548821 HECW2Q9P2P5 1572 aa15.48■□□□□ 0.07
GCN1-205ENST00000548821 ZMYM4Q5VZL5 1548 aa15.48■□□□□ 0.07
GCN1-205ENST00000548821 ZFYVE16Q7Z3T8 1539 aa15.48■□□□□ 0.07
GCN1-205ENST00000548821 ZNF518AQ6AHZ1 1483 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms