RNA–Protein interactions for RNA: ENST00000548786.1

DDX54-205, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-205ENST00000548786 PRG4Q92954 1404 aaPredicted RBP26.72■■□□□ 1.87
DDX54-205ENST00000548786 JPH4Q96JJ6 628 aa26.71■■□□□ 1.87
DDX54-205ENST00000548786 KIAA0586Q9BVV6 1533 aa26.68■■□□□ 1.86
DDX54-205ENST00000548786 RAPGEF2Q9Y4G8 1499 aa26.64■■□□□ 1.86
DDX54-205ENST00000548786 IQGAP2Q13576 1575 aa26.55■■□□□ 1.84
DDX54-205ENST00000548786 TRHP20396 242 aaPredicted RBP26.53■■□□□ 1.84
DDX54-205ENST00000548786 TTBK1Q5TCY1 1321 aaPredicted RBP26.5■■□□□ 1.83
DDX54-205ENST00000548786 CHIC1Q5VXU3 224 aa26.5■■□□□ 1.83
DDX54-205ENST00000548786 FAM9AQ8IZU1 332 aaPredicted RBP26.5■■□□□ 1.83
DDX54-205ENST00000548786 PRXQ9BXM0 1461 aa26.49■■□□□ 1.83
DDX54-205ENST00000548786 CSRNP3Q8WYN3 585 aa26.44■■□□□ 1.82
DDX54-205ENST00000548786 CTTNBP2Q8WZ74 1663 aa26.43■■□□□ 1.82
DDX54-205ENST00000548786 CARMIL2Q6F5E8 1435 aa26.4■■□□□ 1.82
DDX54-205ENST00000548786 EEA1Q15075 1411 aa26.38■■□□□ 1.81
DDX54-205ENST00000548786 DISP1Q96F81 1524 aa26.37■■□□□ 1.81
DDX54-205ENST00000548786 PTPRGP23470 1445 aa26.36■■□□□ 1.81
DDX54-205ENST00000548786 UGGT2Q9NYU1 1516 aa26.35■■□□□ 1.81
DDX54-205ENST00000548786 ADCY10Q96PN6 1610 aa26.34■■□□□ 1.81
DDX54-205ENST00000548786 TNIKQ9UKE5 1360 aa26.33■■□□□ 1.81
DDX54-205ENST00000548786 KIAA0556O60303 1618 aa26.31■■□□□ 1.8
DDX54-205ENST00000548786 EHMT2Q96KQ7 1210 aa26.27■■□□□ 1.8
DDX54-205ENST00000548786 NPM1P06748 294 aaKnown RBP eCLIP26.25■■□□□ 1.79
DDX54-205ENST00000548786 RANGAP1P46060 587 aaPredicted RBP26.2■■□□□ 1.78
DDX54-205ENST00000548786 GOLGA3Q08378 1498 aa26.19■■□□□ 1.78
DDX54-205ENST00000548786 KIF21BO75037 1637 aa26.18■■□□□ 1.78
DDX54-205ENST00000548786 P3H3Q8IVL6 736 aa26.17■■□□□ 1.78
DDX54-205ENST00000548786 UACAQ9BZF9 1416 aa26.16■■□□□ 1.78
DDX54-205ENST00000548786 MAPKBP1O60336 1514 aa26.14■■□□□ 1.77
DDX54-205ENST00000548786 ABCC2Q92887 1545 aa26.13■■□□□ 1.77
DDX54-205ENST00000548786 KIF13AQ9H1H9 1805 aa26.11■■□□□ 1.77
DDX54-205ENST00000548786 UHRF1BP1LA0JNW5 1464 aa26.11■■□□□ 1.77
DDX54-205ENST00000548786 PLB1Q6P1J6 1458 aa26.1■■□□□ 1.77
DDX54-205ENST00000548786 FAM69CQ0P6D2 419 aa26.07■■□□□ 1.76
DDX54-205ENST00000548786 SAMD9Q5K651 1589 aa26.05■■□□□ 1.76
DDX54-205ENST00000548786 UBTFP17480 764 aaKnown RBP26.05■■□□□ 1.76
DDX54-205ENST00000548786 ABCC10Q5T3U5 1492 aa26.04■■□□□ 1.76
DDX54-205ENST00000548786 DIP2BQ9P265 1576 aa26.04■■□□□ 1.76
DDX54-205ENST00000548786 ZCCHC11Q5TAX3 1644 aaKnown RBP26.02■■□□□ 1.76
DDX54-205ENST00000548786 ASXL2Q76L83 1435 aa26.01■■□□□ 1.75
DDX54-205ENST00000548786 ABCA8O94911 1581 aa26■■□□□ 1.75
DDX54-205ENST00000548786 KDM5BQ9UGL1 1544 aa25.99■■□□□ 1.75
DDX54-205ENST00000548786 ARID3CA6NKF2 412 aa25.98■■□□□ 1.75
DDX54-205ENST00000548786 FHOD3Q2V2M9 1422 aa25.97■■□□□ 1.75
DDX54-205ENST00000548786 TSPOAP1O95153 1857 aa25.91■■□□□ 1.74
DDX54-205ENST00000548786 EFCAB5A4FU69 1503 aa25.88■■□□□ 1.73
DDX54-205ENST00000548786 RAPGEF6Q8TEU7 1601 aa25.86■■□□□ 1.73
DDX54-205ENST00000548786 WDR7Q9Y4E6 1490 aa25.84■■□□□ 1.73
DDX54-205ENST00000548786 EPRSP07814 1512 aaKnown RBP25.83■■□□□ 1.73
DDX54-205ENST00000548786 GLI2P10070 1586 aa25.8■■□□□ 1.72
DDX54-205ENST00000548786 ATP10BO94823 1461 aa25.79■■□□□ 1.72
DDX54-205ENST00000548786 KCNH8Q96L42 1107 aa25.79■■□□□ 1.72
DDX54-205ENST00000548786 ARHGAP35Q9NRY4 1499 aa25.79■■□□□ 1.72
DDX54-205ENST00000548786 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.78■■□□□ 1.72
DDX54-205ENST00000548786 HNRNPUL2Q1KMD3 747 aaKnown RBP25.78■■□□□ 1.72
DDX54-205ENST00000548786 NUP153P49790 1475 aaKnown RBP25.77■■□□□ 1.72
DDX54-205ENST00000548786 PPRC1Q5VV67 1664 aaKnown RBP25.74■■□□□ 1.71
DDX54-205ENST00000548786 MAP3K4Q9Y6R4 1608 aa25.73■■□□□ 1.71
DDX54-205ENST00000548786 ATP1B4Q9UN42 357 aaPredicted RBP25.69■■□□□ 1.7
DDX54-205ENST00000548786 KDM6BO15054 1643 aa25.69■■□□□ 1.7
DDX54-205ENST00000548786 FMN1Q68DA7 1419 aa25.65■■□□□ 1.7
DDX54-205ENST00000548786 CDK13Q14004 1512 aaKnown RBP25.63■■□□□ 1.69
DDX54-205ENST00000548786 CD109Q6YHK3 1445 aa25.62■■□□□ 1.69
DDX54-205ENST00000548786 CFAP43Q8NDM7 1665 aa25.61■■□□□ 1.69
DDX54-205ENST00000548786 TEX14Q8IWB6 1497 aa25.6■■□□□ 1.69
DDX54-205ENST00000548786 HECW1Q76N89 1606 aa25.59■■□□□ 1.69
DDX54-205ENST00000548786 CLIP1P30622 1438 aa25.59■■□□□ 1.69
DDX54-205ENST00000548786 PLEKHD1A6NEE1 506 aa25.55■■□□□ 1.68
DDX54-205ENST00000548786 ABCA9Q8IUA7 1624 aa25.53■■□□□ 1.68
DDX54-205ENST00000548786 PCF11O94913 1555 aaKnown RBP25.52■■□□□ 1.68
DDX54-205ENST00000548786 COL17A1Q9UMD9 1497 aaPredicted RBP25.52■■□□□ 1.68
DDX54-205ENST00000548786 MAGI3Q5TCQ9 1506 aa25.52■■□□□ 1.68
DDX54-205ENST00000548786 LOC105371045A0A1W2PR82 267 aa25.5■■□□□ 1.67
DDX54-205ENST00000548786 LRRIQ1Q96JM4 1722 aa25.49■■□□□ 1.67
DDX54-205ENST00000548786 CEP162Q5TB80 1403 aa25.45■■□□□ 1.66
DDX54-205ENST00000548786 CASKIN1Q8WXD9 1431 aa25.45■■□□□ 1.66
DDX54-205ENST00000548786 TTC37Q6PGP7 1564 aa25.44■■□□□ 1.66
DDX54-205ENST00000548786 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.42■■□□□ 1.66
DDX54-205ENST00000548786 FYCO1Q9BQS8 1478 aa25.39■■□□□ 1.65
DDX54-205ENST00000548786 CDK11AQ9UQ88 783 aaPredicted RBP25.38■■□□□ 1.65
DDX54-205ENST00000548786 KIF14Q15058 1648 aa25.37■■□□□ 1.65
DDX54-205ENST00000548786 CCDC18Q5T9S5 1454 aa25.35■■□□□ 1.65
DDX54-205ENST00000548786 TROQ12816 1431 aaPredicted RBP25.33■■□□□ 1.65
DDX54-205ENST00000548786 NEO1Q92859 1461 aa25.31■■□□□ 1.64
DDX54-205ENST00000548786 ARAP3Q8WWN8 1544 aa25.31■■□□□ 1.64
DDX54-205ENST00000548786 FANCAO15360 1455 aa25.29■■□□□ 1.64
DDX54-205ENST00000548786 AEBP2Q6ZN18 517 aaPredicted RBP25.29■■□□□ 1.64
DDX54-205ENST00000548786 RAPGEF3O95398 923 aa25.28■■□□□ 1.64
DDX54-205ENST00000548786 PHLDB1Q86UU1 1377 aa25.25■■□□□ 1.63
DDX54-205ENST00000548786 CFAP74Q9C0B2 1584 aa25.25■■□□□ 1.63
DDX54-205ENST00000548786 MYO5CQ9NQX4 1742 aa25.25■■□□□ 1.63
DDX54-205ENST00000548786 AKNAQ7Z591 1439 aa25.24■■□□□ 1.63
DDX54-205ENST00000548786 PLCH2O75038 1416 aa25.23■■□□□ 1.63
DDX54-205ENST00000548786 FRMPD1Q5SYB0 1578 aa25.22■■□□□ 1.63
DDX54-205ENST00000548786 ARHGAP5Q13017 1502 aa25.18■■□□□ 1.62
DDX54-205ENST00000548786 DENND4BO75064 1496 aaPredicted RBP25.18■■□□□ 1.62
DDX54-205ENST00000548786 KDM4FA0A1W2PPD8 638 aa25.17■■□□□ 1.62
DDX54-205ENST00000548786 ADGRL1O94910 1474 aa25.16■■□□□ 1.62
DDX54-205ENST00000548786 RICTORQ6R327 1708 aa25.15■■□□□ 1.62
DDX54-205ENST00000548786 EFCAB2Q5VUJ9 269 aa25.14■■□□□ 1.62
DDX54-205ENST00000548786 MTUS2Q5JR59 1369 aa25.13■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms