RNA–Protein interactions for RNA: ENST00000548470.1

TUBA1C-203, Transcript of tubulin alpha 1c, humanhuman

TSL 2

Gene TUBA1C, Length 1,105 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1C-203ENST00000548470 RUSC2Q8N2Y8 1516 aa19.52■□□□□ 0.72
TUBA1C-203ENST00000548470 RAPGEF2Q9Y4G8 1499 aa19.52■□□□□ 0.72
TUBA1C-203ENST00000548470 EEA1Q15075 1411 aa19.49■□□□□ 0.71
TUBA1C-203ENST00000548470 SHROOM2Q13796 1616 aa19.48■□□□□ 0.71
TUBA1C-203ENST00000548470 CSRNP3Q8WYN3 585 aa19.47■□□□□ 0.71
TUBA1C-203ENST00000548470 PRG4Q92954 1404 aaPredicted RBP19.47■□□□□ 0.71
TUBA1C-203ENST00000548470 PRXQ9BXM0 1461 aa19.42■□□□□ 0.7
TUBA1C-203ENST00000548470 CARMIL2Q6F5E8 1435 aa19.38■□□□□ 0.69
TUBA1C-203ENST00000548470 FAM9AQ8IZU1 332 aaPredicted RBP19.38■□□□□ 0.69
TUBA1C-203ENST00000548470 ERCC6L2Q5T890 1561 aa19.36■□□□□ 0.69
TUBA1C-203ENST00000548470 IQGAP2Q13576 1575 aa19.34■□□□□ 0.69
TUBA1C-203ENST00000548470 TNIKQ9UKE5 1360 aa19.3■□□□□ 0.68
TUBA1C-203ENST00000548470 PTPRGP23470 1445 aa19.28■□□□□ 0.68
TUBA1C-203ENST00000548470 UGGT2Q9NYU1 1516 aa19.28■□□□□ 0.68
TUBA1C-203ENST00000548470 NPM1P06748 294 aaKnown RBP eCLIP19.27■□□□□ 0.68
TUBA1C-203ENST00000548470 TRHP20396 242 aaPredicted RBP19.24■□□□□ 0.67
TUBA1C-203ENST00000548470 GOLGA3Q08378 1498 aa19.23■□□□□ 0.67
TUBA1C-203ENST00000548470 DISP1Q96F81 1524 aa19.22■□□□□ 0.67
TUBA1C-203ENST00000548470 EHMT2Q96KQ7 1210 aa19.17■□□□□ 0.66
TUBA1C-203ENST00000548470 CTTNBP2Q8WZ74 1663 aa19.17■□□□□ 0.66
TUBA1C-203ENST00000548470 KIF21BO75037 1637 aa19.15■□□□□ 0.66
TUBA1C-203ENST00000548470 TTBK1Q5TCY1 1321 aaPredicted RBP19.13■□□□□ 0.65
TUBA1C-203ENST00000548470 UACAQ9BZF9 1416 aa19.13■□□□□ 0.65
TUBA1C-203ENST00000548470 UHRF1BP1LA0JNW5 1464 aa19.13■□□□□ 0.65
TUBA1C-203ENST00000548470 KIAA0556O60303 1618 aa19.12■□□□□ 0.65
TUBA1C-203ENST00000548470 UBTFP17480 764 aaKnown RBP19.1■□□□□ 0.65
TUBA1C-203ENST00000548470 ADCY10Q96PN6 1610 aa19.07■□□□□ 0.64
TUBA1C-203ENST00000548470 ABCC2Q92887 1545 aa19.07■□□□□ 0.64
TUBA1C-203ENST00000548470 LOC105371045A0A1W2PR82 267 aa19.07■□□□□ 0.64
TUBA1C-203ENST00000548470 MAPKBP1O60336 1514 aa19.06■□□□□ 0.64
TUBA1C-203ENST00000548470 P3H3Q8IVL6 736 aa19.02■□□□□ 0.64
TUBA1C-203ENST00000548470 KDM5BQ9UGL1 1544 aa19■□□□□ 0.63
TUBA1C-203ENST00000548470 ABCC10Q5T3U5 1492 aa19■□□□□ 0.63
TUBA1C-203ENST00000548470 SAMD9Q5K651 1589 aa18.99■□□□□ 0.63
TUBA1C-203ENST00000548470 PLB1Q6P1J6 1458 aa18.99■□□□□ 0.63
TUBA1C-203ENST00000548470 FAM69CQ0P6D2 419 aa18.99■□□□□ 0.63
TUBA1C-203ENST00000548470 EFCAB5A4FU69 1503 aa18.97■□□□□ 0.63
TUBA1C-203ENST00000548470 RANGAP1P46060 587 aaPredicted RBP18.97■□□□□ 0.63
TUBA1C-203ENST00000548470 ABCA8O94911 1581 aa18.95■□□□□ 0.62
TUBA1C-203ENST00000548470 ASXL2Q76L83 1435 aa18.94■□□□□ 0.62
TUBA1C-203ENST00000548470 FHOD3Q2V2M9 1422 aa18.89■□□□□ 0.61
TUBA1C-203ENST00000548470 DIP2BQ9P265 1576 aa18.87■□□□□ 0.61
TUBA1C-203ENST00000548470 FMN1Q68DA7 1419 aa18.86■□□□□ 0.61
TUBA1C-203ENST00000548470 ZCCHC11Q5TAX3 1644 aaKnown RBP18.85■□□□□ 0.61
TUBA1C-203ENST00000548470 ATP10BO94823 1461 aa18.85■□□□□ 0.61
TUBA1C-203ENST00000548470 GLI2P10070 1586 aa18.85■□□□□ 0.61
TUBA1C-203ENST00000548470 WDR7Q9Y4E6 1490 aa18.84■□□□□ 0.61
TUBA1C-203ENST00000548470 EPRSP07814 1512 aaKnown RBP18.83■□□□□ 0.6
TUBA1C-203ENST00000548470 ARHGAP35Q9NRY4 1499 aa18.83■□□□□ 0.6
TUBA1C-203ENST00000548470 RAPGEF6Q8TEU7 1601 aa18.82■□□□□ 0.6
TUBA1C-203ENST00000548470 KIF13AQ9H1H9 1805 aa18.81■□□□□ 0.6
TUBA1C-203ENST00000548470 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.81■□□□□ 0.6
TUBA1C-203ENST00000548470 HNRNPUL2Q1KMD3 747 aaKnown RBP18.81■□□□□ 0.6
TUBA1C-203ENST00000548470 PLEKHD1A6NEE1 506 aa18.79■□□□□ 0.6
TUBA1C-203ENST00000548470 KCNH8Q96L42 1107 aa18.79■□□□□ 0.6
TUBA1C-203ENST00000548470 NUP153P49790 1475 aaKnown RBP18.78■□□□□ 0.6
TUBA1C-203ENST00000548470 CEP162Q5TB80 1403 aa18.76■□□□□ 0.59
TUBA1C-203ENST00000548470 ARID3CA6NKF2 412 aa18.76■□□□□ 0.59
TUBA1C-203ENST00000548470 CDK11AQ9UQ88 783 aaPredicted RBP18.75■□□□□ 0.59
TUBA1C-203ENST00000548470 CLIP1P30622 1438 aa18.74■□□□□ 0.59
TUBA1C-203ENST00000548470 TEX14Q8IWB6 1497 aa18.72■□□□□ 0.59
TUBA1C-203ENST00000548470 ATP1B4Q9UN42 357 aaPredicted RBP18.72■□□□□ 0.59
TUBA1C-203ENST00000548470 CD109Q6YHK3 1445 aa18.72■□□□□ 0.59
TUBA1C-203ENST00000548470 MAP3K4Q9Y6R4 1608 aa18.68■□□□□ 0.58
TUBA1C-203ENST00000548470 MAGI3Q5TCQ9 1506 aa18.68■□□□□ 0.58
TUBA1C-203ENST00000548470 CASKIN1Q8WXD9 1431 aa18.66■□□□□ 0.58
TUBA1C-203ENST00000548470 PHLDB1Q86UU1 1377 aa18.66■□□□□ 0.58
TUBA1C-203ENST00000548470 HECW1Q76N89 1606 aa18.65■□□□□ 0.58
TUBA1C-203ENST00000548470 CFAP43Q8NDM7 1665 aa18.63■□□□□ 0.57
TUBA1C-203ENST00000548470 CCDC18Q5T9S5 1454 aa18.6■□□□□ 0.57
TUBA1C-203ENST00000548470 KDM6BO15054 1643 aa18.6■□□□□ 0.57
TUBA1C-203ENST00000548470 ABCA9Q8IUA7 1624 aa18.6■□□□□ 0.57
TUBA1C-203ENST00000548470 FYCO1Q9BQS8 1478 aa18.59■□□□□ 0.57
TUBA1C-203ENST00000548470 CDK13Q14004 1512 aaKnown RBP18.59■□□□□ 0.57
TUBA1C-203ENST00000548470 TSPOAP1O95153 1857 aa18.58■□□□□ 0.57
TUBA1C-203ENST00000548470 PPRC1Q5VV67 1664 aaKnown RBP18.57■□□□□ 0.56
TUBA1C-203ENST00000548470 TROQ12816 1431 aaPredicted RBP18.56■□□□□ 0.56
TUBA1C-203ENST00000548470 NEO1Q92859 1461 aa18.54■□□□□ 0.56
TUBA1C-203ENST00000548470 ARAP3Q8WWN8 1544 aa18.53■□□□□ 0.56
TUBA1C-203ENST00000548470 COL17A1Q9UMD9 1497 aaPredicted RBP18.52■□□□□ 0.55
TUBA1C-203ENST00000548470 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.51■□□□□ 0.553e-6■■■■■ 40.7
TUBA1C-203ENST00000548470 PCF11O94913 1555 aaKnown RBP18.51■□□□□ 0.55
TUBA1C-203ENST00000548470 PLCH2O75038 1416 aa18.49■□□□□ 0.55
TUBA1C-203ENST00000548470 EFCAB2Q5VUJ9 269 aa18.49■□□□□ 0.55
TUBA1C-203ENST00000548470 VPS8Q8N3P4 1428 aa18.47■□□□□ 0.55
TUBA1C-203ENST00000548470 FANCAO15360 1455 aa18.46■□□□□ 0.54
TUBA1C-203ENST00000548470 AKNAQ7Z591 1439 aa18.45■□□□□ 0.54
TUBA1C-203ENST00000548470 KIF14Q15058 1648 aa18.45■□□□□ 0.54
TUBA1C-203ENST00000548470 CFAP74Q9C0B2 1584 aa18.42■□□□□ 0.54
TUBA1C-203ENST00000548470 MTUS2Q5JR59 1369 aa18.42■□□□□ 0.54
TUBA1C-203ENST00000548470 TTC37Q6PGP7 1564 aa18.41■□□□□ 0.54
TUBA1C-203ENST00000548470 LRRIQ1Q96JM4 1722 aa18.4■□□□□ 0.54
TUBA1C-203ENST00000548470 RAPGEF3O95398 923 aa18.4■□□□□ 0.54
TUBA1C-203ENST00000548470 DENND4BO75064 1496 aaPredicted RBP18.39■□□□□ 0.54
TUBA1C-203ENST00000548470 SCAPERQ9BY12 1400 aa18.35■□□□□ 0.53
TUBA1C-203ENST00000548470 ADGRL1O94910 1474 aa18.34■□□□□ 0.53
TUBA1C-203ENST00000548470 APLP2Q06481 763 aa18.34■□□□□ 0.53
TUBA1C-203ENST00000548470 AEBP2Q6ZN18 517 aaPredicted RBP18.34■□□□□ 0.53
TUBA1C-203ENST00000548470 ARHGAP5Q13017 1502 aa18.33■□□□□ 0.53
TUBA1C-203ENST00000548470 MAP3K1Q13233 1512 aa18.33■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms