RNA–Protein interactions for RNA: ENST00000548470.1

TUBA1C-203, Transcript of tubulin alpha 1c, humanhuman

TSL 2

Gene TUBA1C, Length 1,105 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1C-203ENST00000548470 NISCHQ9Y2I1 1504 aa28.15■■■□□ 2.1
TUBA1C-203ENST00000548470 CCDC180Q9P1Z9 1646 aa24.98■■□□□ 1.59
TUBA1C-203ENST00000548470 ABCC9O60706 1549 aa24.48■■□□□ 1.51
TUBA1C-203ENST00000548470 RB1CC1Q8TDY2 1594 aa23.6■■□□□ 1.37
TUBA1C-203ENST00000548470 NACADO15069 1562 aa23.59■■□□□ 1.37
TUBA1C-203ENST00000548470 DCAF8L2P0C7V8 631 aa23.58■■□□□ 1.37
TUBA1C-203ENST00000548470 MYO15BQ96JP2 1530 aa23.49■■□□□ 1.35
TUBA1C-203ENST00000548470 ZCCHC6Q5VYS8 1495 aaKnown RBP23.41■■□□□ 1.34
TUBA1C-203ENST00000548470 DCAF1Q9Y4B6 1507 aa23.35■■□□□ 1.33
TUBA1C-203ENST00000548470 PABPN1Q86U42 306 aaKnown RBP eCLIP22.91■■□□□ 1.26
TUBA1C-203ENST00000548470 UNC13AQ9UPW8 1703 aa22.82■■□□□ 1.24
TUBA1C-203ENST00000548470 BICRAQ9NZM4 1560 aa22.8■■□□□ 1.24
TUBA1C-203ENST00000548470 SHROOM4Q9ULL8 1493 aa22.73■■□□□ 1.23
TUBA1C-203ENST00000548470 SCRIBQ14160 1630 aa22.71■■□□□ 1.23
TUBA1C-203ENST00000548470 DNAJC5BQ9UF47 199 aa22.53■■□□□ 1.2
TUBA1C-203ENST00000548470 EIF4G1Q04637 1599 aaKnown RBP22.23■■□□□ 1.15
TUBA1C-203ENST00000548470 CC2D2AQ9P2K1 1620 aa22.13■■□□□ 1.13
TUBA1C-203ENST00000548470 CECR2Q9BXF3 1484 aa22.05■■□□□ 1.12
TUBA1C-203ENST00000548470 BAZ1AQ9NRL2 1556 aaPredicted RBP21.83■■□□□ 1.09
TUBA1C-203ENST00000548470 NCAPD3P42695 1498 aa21.81■■□□□ 1.08
TUBA1C-203ENST00000548470 SMARCA4P51532 1647 aa21.78■■□□□ 1.08
TUBA1C-203ENST00000548470 ATAD2BQ9ULI0 1458 aa21.76■■□□□ 1.07
TUBA1C-203ENST00000548470 SMARCA2P51531 1590 aa21.74■■□□□ 1.07
TUBA1C-203ENST00000548470 MROH2BQ7Z745 1585 aa21.64■■□□□ 1.05
TUBA1C-203ENST00000548470 PEG3Q9GZU2 1588 aa21.63■■□□□ 1.05
TUBA1C-203ENST00000548470 HMGXB3Q12766 1538 aa21.62■■□□□ 1.05
TUBA1C-203ENST00000548470 BAZ1BQ9UIG0 1483 aaKnown RBP21.56■■□□□ 1.04
TUBA1C-203ENST00000548470 RSF1Q96T23 1441 aaPredicted RBP21.45■■□□□ 1.02
TUBA1C-203ENST00000548470 WIZO95785 1651 aa21.34■■□□□ 1.01
TUBA1C-203ENST00000548470 TOP2AP11388 1531 aaKnown RBP21.19■□□□□ 0.98
TUBA1C-203ENST00000548470 LAMC3Q9Y6N6 1575 aa21.18■□□□□ 0.98
TUBA1C-203ENST00000548470 CADPSQ9ULU8 1353 aa21.17■□□□□ 0.98
TUBA1C-203ENST00000548470 ERCC6Q03468 1493 aa21.15■□□□□ 0.98
TUBA1C-203ENST00000548470 NESP48681 1621 aa21.14■□□□□ 0.97
TUBA1C-203ENST00000548470 PDS5BQ9NTI5 1447 aa21.12■□□□□ 0.97
TUBA1C-203ENST00000548470 CFTRP13569 1480 aa21.01■□□□□ 0.95
TUBA1C-203ENST00000548470 CUX2O14529 1486 aa21■□□□□ 0.95
TUBA1C-203ENST00000548470 CCDC88BA6NC98 1476 aa20.97■□□□□ 0.95
TUBA1C-203ENST00000548470 SUPT5HO00267 1087 aaKnown RBP20.94■□□□□ 0.94
TUBA1C-203ENST00000548470 FANCD2Q9BXW9 1451 aa20.86■□□□□ 0.93
TUBA1C-203ENST00000548470 CEP164Q9UPV0 1460 aa20.84■□□□□ 0.93
TUBA1C-203ENST00000548470 MRC2Q9UBG0 1479 aa20.81■□□□□ 0.92
TUBA1C-203ENST00000548470 THOC2Q8NI27 1593 aaKnown RBP20.8■□□□□ 0.92
TUBA1C-203ENST00000548470 KIF21AQ7Z4S6 1674 aa20.8■□□□□ 0.92
TUBA1C-203ENST00000548470 WDR62O43379 1518 aa20.72■□□□□ 0.91
TUBA1C-203ENST00000548470 PRDM2Q13029 1718 aa20.64■□□□□ 0.9
TUBA1C-203ENST00000548470 ABCC8Q09428 1581 aa20.63■□□□□ 0.89
TUBA1C-203ENST00000548470 URB2Q14146 1524 aaKnown RBP20.6■□□□□ 0.89
TUBA1C-203ENST00000548470 TOPBP1Q92547 1522 aa20.5■□□□□ 0.87
TUBA1C-203ENST00000548470 DNMBPQ6XZF7 1577 aa20.46■□□□□ 0.87
TUBA1C-203ENST00000548470 DNAJC5Q9H3Z4 198 aa20.44■□□□□ 0.86
TUBA1C-203ENST00000548470 IFT140Q96RY7 1462 aa20.43■□□□□ 0.86
TUBA1C-203ENST00000548470 POLA1P09884 1462 aaPredicted RBP20.32■□□□□ 0.84
TUBA1C-203ENST00000548470 SOGA1O94964 1423 aa20.31■□□□□ 0.84
TUBA1C-203ENST00000548470 CUX1P39880 1505 aa20.3■□□□□ 0.84
TUBA1C-203ENST00000548470 FGD5Q6ZNL6 1462 aa20.25■□□□□ 0.83
TUBA1C-203ENST00000548470 ZNF608Q9ULD9 1512 aaPredicted RBP20.25■□□□□ 0.83
TUBA1C-203ENST00000548470 TARBP1Q13395 1621 aaKnown RBP20.24■□□□□ 0.83
TUBA1C-203ENST00000548470 WRNQ14191 1432 aaPredicted RBP eCLIP20.23■□□□□ 0.839e-8■■■□□ 14.8
TUBA1C-203ENST00000548470 RAD54L2Q9Y4B4 1467 aa20.21■□□□□ 0.83
TUBA1C-203ENST00000548470 OSCARQ8IYS5 282 aa20.19■□□□□ 0.82
TUBA1C-203ENST00000548470 AQRO60306 1485 aaKnown RBP eCLIP20.18■□□□□ 0.821e-10■■■□□ 17.3
TUBA1C-203ENST00000548470 WDR97A6NE52 1622 aa20.18■□□□□ 0.82
TUBA1C-203ENST00000548470 TDRD9Q8NDG6 1382 aaKnown RBP20.16■□□□□ 0.82
TUBA1C-203ENST00000548470 TOP2BQ02880 1626 aa20.13■□□□□ 0.81
TUBA1C-203ENST00000548470 EIF4G3O43432 1585 aaKnown RBP20.12■□□□□ 0.81
TUBA1C-203ENST00000548470 ABCA10Q8WWZ4 1543 aa20.11■□□□□ 0.81
TUBA1C-203ENST00000548470 BIVM-ERCC5R4GMW8 1640 aa20.09■□□□□ 0.81
TUBA1C-203ENST00000548470 GRIN2BQ13224 1484 aa20.07■□□□□ 0.8
TUBA1C-203ENST00000548470 SYNJ1O43426 1573 aa20.06■□□□□ 0.8
TUBA1C-203ENST00000548470 GAPVD1Q14C86 1478 aa20.05■□□□□ 0.8
TUBA1C-203ENST00000548470 MAGI1Q96QZ7 1491 aaPredicted RBP20.01■□□□□ 0.79
TUBA1C-203ENST00000548470 FBLN2P98095 1184 aa20■□□□□ 0.79
TUBA1C-203ENST00000548470 CHMP7Q8WUX9 453 aaPredicted RBP19.99■□□□□ 0.79
TUBA1C-203ENST00000548470 SNAPC4Q5SXM2 1469 aa19.97■□□□□ 0.79
TUBA1C-203ENST00000548470 ABCA5Q8WWZ7 1642 aa19.94■□□□□ 0.78
TUBA1C-203ENST00000548470 SYNJ2O15056 1496 aa19.92■□□□□ 0.78
TUBA1C-203ENST00000548470 ERICH3Q5RHP9 1530 aa19.87■□□□□ 0.77
TUBA1C-203ENST00000548470 KIF27Q86VH2 1401 aa19.85■□□□□ 0.77
TUBA1C-203ENST00000548470 FHAD1B1AJZ9 1412 aa19.85■□□□□ 0.77
TUBA1C-203ENST00000548470 PBRM1Q86U86 1689 aa19.84■□□□□ 0.77
TUBA1C-203ENST00000548470 CHIC1Q5VXU3 224 aa19.82■□□□□ 0.76
TUBA1C-203ENST00000548470 CHD1O14646 1710 aa19.82■□□□□ 0.76
TUBA1C-203ENST00000548470 TRIM41Q8WV44 630 aa19.8■□□□□ 0.76
TUBA1C-203ENST00000548470 IGF1RP08069 1367 aa19.78■□□□□ 0.76
TUBA1C-203ENST00000548470 GRIN2AQ12879 1464 aa19.77■□□□□ 0.76
TUBA1C-203ENST00000548470 ADAMTS12P58397 1594 aa19.74■□□□□ 0.75
TUBA1C-203ENST00000548470 CLASP1Q7Z460 1538 aa19.72■□□□□ 0.75
TUBA1C-203ENST00000548470 ARHGEF11O15085 1522 aa19.71■□□□□ 0.75
TUBA1C-203ENST00000548470 NUP160Q12769 1436 aa19.7■□□□□ 0.74
TUBA1C-203ENST00000548470 RIMBP3CA6NJZ7 1639 aa19.66■□□□□ 0.74
TUBA1C-203ENST00000548470 RIMBP3BA6NNM3 1639 aa19.66■□□□□ 0.74
TUBA1C-203ENST00000548470 RIMBP3Q9UFD9 1639 aa19.66■□□□□ 0.74
TUBA1C-203ENST00000548470 CARMIL1Q5VZK9 1371 aa19.66■□□□□ 0.74
TUBA1C-203ENST00000548470 CUL7Q14999 1698 aa19.63■□□□□ 0.73
TUBA1C-203ENST00000548470 CYB5RLQ6IPT4 315 aa19.62■□□□□ 0.73
TUBA1C-203ENST00000548470 CEP170Q5SW79 1584 aa19.59■□□□□ 0.73
TUBA1C-203ENST00000548470 JPH4Q96JJ6 628 aa19.59■□□□□ 0.73
TUBA1C-203ENST00000548470 KIAA0586Q9BVV6 1533 aa19.55■□□□□ 0.72
TUBA1C-203ENST00000548470 ARAP1Q96P48 1450 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms