RNA–Protein interactions for RNA: ENST00000548173.5

PRIM1-203, Transcript of DNA primase subunit 1, humanhuman

TSL 4

Gene PRIM1, Length 590 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1-203ENST00000548173 IGF1RP08069 1367 aa13.63□□□□□ -0.23
PRIM1-203ENST00000548173 CEP170Q5SW79 1584 aa13.62□□□□□ -0.23
PRIM1-203ENST00000548173 PIAS4Q8N2W9 510 aaPredicted RBP13.59□□□□□ -0.23
PRIM1-203ENST00000548173 CUL7Q14999 1698 aa13.55□□□□□ -0.24
PRIM1-203ENST00000548173 SHROOM2Q13796 1616 aa13.54□□□□□ -0.24
PRIM1-203ENST00000548173 CARMIL1Q5VZK9 1371 aa13.54□□□□□ -0.24
PRIM1-203ENST00000548173 ERCC6L2Q5T890 1561 aa13.54□□□□□ -0.24
PRIM1-203ENST00000548173 JPH4Q96JJ6 628 aa13.52□□□□□ -0.25
PRIM1-203ENST00000548173 RUSC2Q8N2Y8 1516 aa13.5□□□□□ -0.25
PRIM1-203ENST00000548173 KIAA0586Q9BVV6 1533 aa13.49□□□□□ -0.25
PRIM1-203ENST00000548173 PRG4Q92954 1404 aaPredicted RBP13.48□□□□□ -0.25
PRIM1-203ENST00000548173 ADRA2BP18089 450 aa13.46□□□□□ -0.25
PRIM1-203ENST00000548173 POTEDQ86YR6 584 aa13.44□□□□□ -0.26
PRIM1-203ENST00000548173 PPP6R1Q9UPN7 881 aa13.44□□□□□ -0.26
PRIM1-203ENST00000548173 RAPGEF2Q9Y4G8 1499 aa13.42□□□□□ -0.26
PRIM1-203ENST00000548173 TRHP20396 242 aaPredicted RBP13.4□□□□□ -0.26
PRIM1-203ENST00000548173 IQGAP2Q13576 1575 aa13.37□□□□□ -0.27
PRIM1-203ENST00000548173 PRXQ9BXM0 1461 aa13.36□□□□□ -0.27
PRIM1-203ENST00000548173 CARMIL2Q6F5E8 1435 aa13.33□□□□□ -0.28
PRIM1-203ENST00000548173 CSRNP3Q8WYN3 585 aa13.32□□□□□ -0.28
PRIM1-203ENST00000548173 PTPRGP23470 1445 aa13.31□□□□□ -0.28
PRIM1-203ENST00000548173 UGGT2Q9NYU1 1516 aa13.31□□□□□ -0.28
PRIM1-203ENST00000548173 TNIKQ9UKE5 1360 aa13.31□□□□□ -0.28
PRIM1-203ENST00000548173 EEA1Q15075 1411 aa13.3□□□□□ -0.28
PRIM1-203ENST00000548173 DISP1Q96F81 1524 aa13.3□□□□□ -0.28
PRIM1-203ENST00000548173 ADCY10Q96PN6 1610 aa13.28□□□□□ -0.28
PRIM1-203ENST00000548173 CTTNBP2Q8WZ74 1663 aa13.28□□□□□ -0.28
PRIM1-203ENST00000548173 NPM1P06748 294 aaKnown RBP eCLIP13.27□□□□□ -0.29
PRIM1-203ENST00000548173 TTBK1Q5TCY1 1321 aaPredicted RBP13.26□□□□□ -0.29
PRIM1-203ENST00000548173 KIAA0556O60303 1618 aa13.24□□□□□ -0.29
PRIM1-203ENST00000548173 MAPKBP1O60336 1514 aa13.23□□□□□ -0.29
PRIM1-203ENST00000548173 FAM9AQ8IZU1 332 aaPredicted RBP13.23□□□□□ -0.29
PRIM1-203ENST00000548173 UHRF1BP1LA0JNW5 1464 aa13.22□□□□□ -0.29
PRIM1-203ENST00000548173 UACAQ9BZF9 1416 aa13.22□□□□□ -0.29
PRIM1-203ENST00000548173 GOLGA3Q08378 1498 aa13.21□□□□□ -0.3
PRIM1-203ENST00000548173 ABCC2Q92887 1545 aa13.2□□□□□ -0.3
PRIM1-203ENST00000548173 ABCC10Q5T3U5 1492 aa13.2□□□□□ -0.3
PRIM1-203ENST00000548173 KIF13AQ9H1H9 1805 aa13.2□□□□□ -0.3
PRIM1-203ENST00000548173 FAM69CQ0P6D2 419 aa13.18□□□□□ -0.3
PRIM1-203ENST00000548173 KDM5BQ9UGL1 1544 aa13.16□□□□□ -0.3
PRIM1-203ENST00000548173 KIF21BO75037 1637 aa13.16□□□□□ -0.3
PRIM1-203ENST00000548173 DIP2BQ9P265 1576 aa13.15□□□□□ -0.3
PRIM1-203ENST00000548173 PLB1Q6P1J6 1458 aa13.15□□□□□ -0.3
PRIM1-203ENST00000548173 ASXL2Q76L83 1435 aa13.14□□□□□ -0.31
PRIM1-203ENST00000548173 P3H3Q8IVL6 736 aa13.13□□□□□ -0.31
PRIM1-203ENST00000548173 ABCA8O94911 1581 aa13.12□□□□□ -0.31
PRIM1-203ENST00000548173 SAMD9Q5K651 1589 aa13.12□□□□□ -0.31
PRIM1-203ENST00000548173 ZCCHC11Q5TAX3 1644 aaKnown RBP13.1□□□□□ -0.31
PRIM1-203ENST00000548173 RANGAP1P46060 587 aaPredicted RBP13.07□□□□□ -0.32
PRIM1-203ENST00000548173 GLI2P10070 1586 aa13.07□□□□□ -0.32
PRIM1-203ENST00000548173 UBTFP17480 764 aaKnown RBP13.06□□□□□ -0.32
PRIM1-203ENST00000548173 EHMT2Q96KQ7 1210 aa13.06□□□□□ -0.32
PRIM1-203ENST00000548173 EPRSP07814 1512 aaKnown RBP13.05□□□□□ -0.32
PRIM1-203ENST00000548173 FHOD3Q2V2M9 1422 aa13.05□□□□□ -0.32
PRIM1-203ENST00000548173 WDR7Q9Y4E6 1490 aa13.04□□□□□ -0.32
PRIM1-203ENST00000548173 EFCAB5A4FU69 1503 aa13.03□□□□□ -0.32
PRIM1-203ENST00000548173 TSPOAP1O95153 1857 aa13.03□□□□□ -0.32
PRIM1-203ENST00000548173 ATP10BO94823 1461 aa13.03□□□□□ -0.32
PRIM1-203ENST00000548173 RAPGEF6Q8TEU7 1601 aa13.02□□□□□ -0.33
PRIM1-203ENST00000548173 ARID3CA6NKF2 412 aa13.01□□□□□ -0.33
PRIM1-203ENST00000548173 PPRC1Q5VV67 1664 aaKnown RBP13□□□□□ -0.33
PRIM1-203ENST00000548173 MAP3K4Q9Y6R4 1608 aa12.99□□□□□ -0.33
PRIM1-203ENST00000548173 NUP153P49790 1475 aaKnown RBP12.98□□□□□ -0.33
PRIM1-203ENST00000548173 KCNH8Q96L42 1107 aa12.98□□□□□ -0.33
PRIM1-203ENST00000548173 ARHGAP35Q9NRY4 1499 aa12.97□□□□□ -0.33
PRIM1-203ENST00000548173 KDM6BO15054 1643 aa12.97□□□□□ -0.33
PRIM1-203ENST00000548173 CD109Q6YHK3 1445 aa12.95□□□□□ -0.34
PRIM1-203ENST00000548173 TEX14Q8IWB6 1497 aa12.94□□□□□ -0.34
PRIM1-203ENST00000548173 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.94□□□□□ -0.34
PRIM1-203ENST00000548173 HNRNPUL2Q1KMD3 747 aaKnown RBP12.94□□□□□ -0.34
PRIM1-203ENST00000548173 CFAP43Q8NDM7 1665 aa12.93□□□□□ -0.34
PRIM1-203ENST00000548173 FMN1Q68DA7 1419 aa12.93□□□□□ -0.34
PRIM1-203ENST00000548173 MAGI3Q5TCQ9 1506 aa12.93□□□□□ -0.34
PRIM1-203ENST00000548173 COL17A1Q9UMD9 1497 aaPredicted RBP12.92□□□□□ -0.34
PRIM1-203ENST00000548173 PLEKHD1A6NEE1 506 aa12.9□□□□□ -0.34
PRIM1-203ENST00000548173 ABCA9Q8IUA7 1624 aa12.89□□□□□ -0.35
PRIM1-203ENST00000548173 CDK13Q14004 1512 aaKnown RBP12.87□□□□□ -0.35
PRIM1-203ENST00000548173 ATP1B4Q9UN42 357 aaPredicted RBP12.86□□□□□ -0.35
PRIM1-203ENST00000548173 HECW1Q76N89 1606 aa12.86□□□□□ -0.35
PRIM1-203ENST00000548173 CLIP1P30622 1438 aa12.85□□□□□ -0.35
PRIM1-203ENST00000548173 PHLDB1Q86UU1 1377 aa12.82□□□□□ -0.36
PRIM1-203ENST00000548173 CASKIN1Q8WXD9 1431 aa12.82□□□□□ -0.36
PRIM1-203ENST00000548173 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.82□□□□□ -0.36
PRIM1-203ENST00000548173 ARAP3Q8WWN8 1544 aa12.82□□□□□ -0.36
PRIM1-203ENST00000548173 NEO1Q92859 1461 aa12.81□□□□□ -0.36
PRIM1-203ENST00000548173 CDK11AQ9UQ88 783 aaPredicted RBP12.81□□□□□ -0.36
PRIM1-203ENST00000548173 LRRIQ1Q96JM4 1722 aa12.79□□□□□ -0.36
PRIM1-203ENST00000548173 PCF11O94913 1555 aaKnown RBP12.79□□□□□ -0.36
PRIM1-203ENST00000548173 TTC37Q6PGP7 1564 aa12.78□□□□□ -0.36
PRIM1-203ENST00000548173 TROQ12816 1431 aaPredicted RBP12.78□□□□□ -0.36
PRIM1-203ENST00000548173 KDM4FA0A1W2PPD8 638 aa12.77□□□□□ -0.37
PRIM1-203ENST00000548173 CCDC18Q5T9S5 1454 aa12.77□□□□□ -0.37
PRIM1-203ENST00000548173 FYCO1Q9BQS8 1478 aa12.77□□□□□ -0.37
PRIM1-203ENST00000548173 CEP162Q5TB80 1403 aa12.76□□□□□ -0.37
PRIM1-203ENST00000548173 FANCAO15360 1455 aa12.76□□□□□ -0.37
PRIM1-203ENST00000548173 LOC105371045A0A1W2PR82 267 aa12.75□□□□□ -0.37
PRIM1-203ENST00000548173 PLCH2O75038 1416 aa12.75□□□□□ -0.37
PRIM1-203ENST00000548173 RAPGEF3O95398 923 aa12.75□□□□□ -0.37
PRIM1-203ENST00000548173 AKNAQ7Z591 1439 aa12.75□□□□□ -0.37
PRIM1-203ENST00000548173 KIF14Q15058 1648 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms