RNA–Protein interactions for RNA: ENST00000548158.1

RACGAP1-210, Transcript of Rac GTPase activating protein 1, humanhuman

TSL 4

Gene RACGAP1, Length 596 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACGAP1-210ENST00000548158 FGD5Q6ZNL6 1462 aa8.38□□□□□ -1.07
RACGAP1-210ENST00000548158 C1QBPQ07021 282 aaKnown RBP8.36□□□□□ -1.07
RACGAP1-210ENST00000548158 POLA1P09884 1462 aaPredicted RBP8.36□□□□□ -1.07
RACGAP1-210ENST00000548158 URB2Q14146 1524 aaKnown RBP8.35□□□□□ -1.07
RACGAP1-210ENST00000548158 ERICH3Q5RHP9 1530 aa8.34□□□□□ -1.07
RACGAP1-210ENST00000548158 GOLGA3Q08378 1498 aa8.33□□□□□ -1.08
RACGAP1-210ENST00000548158 CUX2O14529 1486 aa8.32□□□□□ -1.08
RACGAP1-210ENST00000548158 TNIKQ9UKE5 1360 aa8.32□□□□□ -1.08
RACGAP1-210ENST00000548158 PRXQ9BXM0 1461 aa8.32□□□□□ -1.08
RACGAP1-210ENST00000548158 KIF21BO75037 1637 aa8.31□□□□□ -1.08
RACGAP1-210ENST00000548158 GTF3C3Q9Y5Q9 886 aa8.3□□□□□ -1.08
RACGAP1-210ENST00000548158 IGF1RP08069 1367 aa8.3□□□□□ -1.08
RACGAP1-210ENST00000548158 GRIN2BQ13224 1484 aa8.29□□□□□ -1.08
RACGAP1-210ENST00000548158 GAPVD1Q14C86 1478 aa8.28□□□□□ -1.08
RACGAP1-210ENST00000548158 RAPGEF2Q9Y4G8 1499 aa8.28□□□□□ -1.08
RACGAP1-210ENST00000548158 CARMIL1Q5VZK9 1371 aa8.28□□□□□ -1.08
RACGAP1-210ENST00000548158 CUL7Q14999 1698 aa8.27□□□□□ -1.08
RACGAP1-210ENST00000548158 KIF21AQ7Z4S6 1674 aa8.27□□□□□ -1.08
RACGAP1-210ENST00000548158 THOC2Q8NI27 1593 aaKnown RBP8.27□□□□□ -1.09
RACGAP1-210ENST00000548158 HAP1P54257 671 aaPredicted RBP8.27□□□□□ -1.09
RACGAP1-210ENST00000548158 FAM9AQ8IZU1 332 aaPredicted RBP8.27□□□□□ -1.09
RACGAP1-210ENST00000548158 FHAD1B1AJZ9 1412 aa8.27□□□□□ -1.09
RACGAP1-210ENST00000548158 MAGI1Q96QZ7 1491 aaPredicted RBP8.26□□□□□ -1.09
RACGAP1-210ENST00000548158 TARBP1Q13395 1621 aaKnown RBP8.25□□□□□ -1.09
RACGAP1-210ENST00000548158 VSIG10Q8N0Z9 540 aa8.24□□□□□ -1.09
RACGAP1-210ENST00000548158 ABCA5Q8WWZ7 1642 aa8.24□□□□□ -1.09
RACGAP1-210ENST00000548158 ZBTB22O15209 634 aa8.23□□□□□ -1.09
RACGAP1-210ENST00000548158 UBTFP17480 764 aaKnown RBP8.23□□□□□ -1.09
RACGAP1-210ENST00000548158 RAD54L2Q9Y4B4 1467 aa8.23□□□□□ -1.09
RACGAP1-210ENST00000548158 PODXL2Q9NZ53 605 aa8.21□□□□□ -1.1
RACGAP1-210ENST00000548158 TDRD9Q8NDG6 1382 aaKnown RBP8.21□□□□□ -1.1
RACGAP1-210ENST00000548158 SYNJ2O15056 1496 aa8.19□□□□□ -1.1
RACGAP1-210ENST00000548158 RUSC2Q8N2Y8 1516 aa8.18□□□□□ -1.1
RACGAP1-210ENST00000548158 EFCAB5A4FU69 1503 aa8.17□□□□□ -1.1
RACGAP1-210ENST00000548158 CLIP1P30622 1438 aa8.16□□□□□ -1.1
RACGAP1-210ENST00000548158 CEP162Q5TB80 1403 aa8.16□□□□□ -1.1
RACGAP1-210ENST00000548158 KIAA0586Q9BVV6 1533 aa8.15□□□□□ -1.1
RACGAP1-210ENST00000548158 AQRO60306 1485 aaKnown RBP eCLIP8.15□□□□□ -1.11e-6■■□□□ 13.5
RACGAP1-210ENST00000548158 CHMP7Q8WUX9 453 aaPredicted RBP8.15□□□□□ -1.1
RACGAP1-210ENST00000548158 ADAMTS12P58397 1594 aa8.14□□□□□ -1.11
RACGAP1-210ENST00000548158 EIF4G3O43432 1585 aaKnown RBP8.14□□□□□ -1.11
RACGAP1-210ENST00000548158 LOC105371045A0A1W2PR82 267 aa8.13□□□□□ -1.11
RACGAP1-210ENST00000548158 GRIN2AQ12879 1464 aa8.13□□□□□ -1.11
RACGAP1-210ENST00000548158 FMN1Q68DA7 1419 aa8.12□□□□□ -1.11
RACGAP1-210ENST00000548158 HOXD11P31277 338 aaPredicted RBP8.12□□□□□ -1.11
RACGAP1-210ENST00000548158 TMEM132AQ24JP5 1023 aa8.12□□□□□ -1.11
RACGAP1-210ENST00000548158 ZNF608Q9ULD9 1512 aaPredicted RBP8.12□□□□□ -1.11
RACGAP1-210ENST00000548158 SNAPC4Q5SXM2 1469 aa8.12□□□□□ -1.11
RACGAP1-210ENST00000548158 NUP160Q12769 1436 aa8.12□□□□□ -1.11
RACGAP1-210ENST00000548158 CARMIL2Q6F5E8 1435 aa8.12□□□□□ -1.11
RACGAP1-210ENST00000548158 VPS8Q8N3P4 1428 aa8.11□□□□□ -1.11
RACGAP1-210ENST00000548158 KLHL34Q8N239 644 aa8.1□□□□□ -1.11
RACGAP1-210ENST00000548158 PBRM1Q86U86 1689 aa8.09□□□□□ -1.11
RACGAP1-210ENST00000548158 FKBP8Q14318 412 aa8.09□□□□□ -1.11
RACGAP1-210ENST00000548158 MAP3K1Q13233 1512 aa8.08□□□□□ -1.12
RACGAP1-210ENST00000548158 UGGT2Q9NYU1 1516 aa8.08□□□□□ -1.12
RACGAP1-210ENST00000548158 FBXO3Q9UK99 471 aa8.08□□□□□ -1.12
RACGAP1-210ENST00000548158 IQGAP2Q13576 1575 aa8.07□□□□□ -1.12
RACGAP1-210ENST00000548158 NPM2Q86SE8 214 aaKnown RBP8.05□□□□□ -1.12
RACGAP1-210ENST00000548158 C14orf37Q86TY3 774 aa8.05□□□□□ -1.12
RACGAP1-210ENST00000548158 ARHGAP35Q9NRY4 1499 aa8.04□□□□□ -1.12
RACGAP1-210ENST00000548158 CASKIN1Q8WXD9 1431 aa8.03□□□□□ -1.12
RACGAP1-210ENST00000548158 FYCO1Q9BQS8 1478 aa8.03□□□□□ -1.12
RACGAP1-210ENST00000548158 JPH4Q96JJ6 628 aa8.03□□□□□ -1.12
RACGAP1-210ENST00000548158 CDK11AQ9UQ88 783 aaPredicted RBP8.03□□□□□ -1.12
RACGAP1-210ENST00000548158 CTTNBP2Q8WZ74 1663 aa8.02□□□□□ -1.13
RACGAP1-210ENST00000548158 SAMD9Q5K651 1589 aa8.02□□□□□ -1.13
RACGAP1-210ENST00000548158 FBLN2P98095 1184 aa8.02□□□□□ -1.13
RACGAP1-210ENST00000548158 CCDC18Q5T9S5 1454 aa8.01□□□□□ -1.13
RACGAP1-210ENST00000548158 PPP4R3CPQ6ZMV5 832 aa8.01□□□□□ -1.13
RACGAP1-210ENST00000548158 OSCARQ8IYS5 282 aa8.01□□□□□ -1.13
RACGAP1-210ENST00000548158 ACIN1Q9UKV3 1341 aaKnown RBP8□□□□□ -1.13
RACGAP1-210ENST00000548158 NPM3O75607 178 aaKnown RBP7.99□□□□□ -1.13
RACGAP1-210ENST00000548158 ARAP1Q96P48 1450 aa7.99□□□□□ -1.13
RACGAP1-210ENST00000548158 EIF5BO60841 1220 aaKnown RBP7.97□□□□□ -1.13
RACGAP1-210ENST00000548158 TRIM26Q12899 539 aaPredicted RBP7.97□□□□□ -1.13
RACGAP1-210ENST00000548158 KDM2AQ9Y2K7 1162 aa7.97□□□□□ -1.13
RACGAP1-210ENST00000548158 CEP170Q5SW79 1584 aa7.97□□□□□ -1.13
RACGAP1-210ENST00000548158 RNF216Q9NWF9 866 aaPredicted RBP7.96□□□□□ -1.14
RACGAP1-210ENST00000548158 KIAA0556O60303 1618 aa7.96□□□□□ -1.14
RACGAP1-210ENST00000548158 PTPRGP23470 1445 aa7.95□□□□□ -1.14
RACGAP1-210ENST00000548158 CLASP1Q7Z460 1538 aa7.95□□□□□ -1.14
RACGAP1-210ENST00000548158 DISP1Q96F81 1524 aa7.95□□□□□ -1.14
RACGAP1-210ENST00000548158 CNKSR2Q8WXI2 1034 aa7.95□□□□□ -1.14
RACGAP1-210ENST00000548158 SHROOM2Q13796 1616 aa7.95□□□□□ -1.14
RACGAP1-210ENST00000548158 PRG4Q92954 1404 aaPredicted RBP7.95□□□□□ -1.14
RACGAP1-210ENST00000548158 HECW1Q76N89 1606 aa7.94□□□□□ -1.14
RACGAP1-210ENST00000548158 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.94□□□□□ -1.14
RACGAP1-210ENST00000548158 FHOD3Q2V2M9 1422 aa7.94□□□□□ -1.14
RACGAP1-210ENST00000548158 UHRF1BP1LA0JNW5 1464 aa7.94□□□□□ -1.14
RACGAP1-210ENST00000548158 FOXD4L1Q9NU39 408 aa7.93□□□□□ -1.14
RACGAP1-210ENST00000548158 MTUS2Q5JR59 1369 aa7.91□□□□□ -1.14
RACGAP1-210ENST00000548158 UACAQ9BZF9 1416 aa7.91□□□□□ -1.14
RACGAP1-210ENST00000548158 TIAM1Q13009 1591 aa7.9□□□□□ -1.14
RACGAP1-210ENST00000548158 EHBP1L1Q8N3D4 1523 aa7.89□□□□□ -1.15
RACGAP1-210ENST00000548158 LRRC9Q6ZRR7 1453 aa7.89□□□□□ -1.15
RACGAP1-210ENST00000548158 EPRSP07814 1512 aaKnown RBP7.88□□□□□ -1.15
RACGAP1-210ENST00000548158 PLEKHD1A6NEE1 506 aa7.88□□□□□ -1.15
RACGAP1-210ENST00000548158 MIA2Q96PC5 1412 aa7.87□□□□□ -1.15
RACGAP1-210ENST00000548158 CHD1O14646 1710 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms