RNA–Protein interactions for RNA: ENST00000547606.1

C12orf49-202, Transcript of chromosome 12 open reading frame 49, humanhuman

TSL 3

Gene C12orf49, Length 492 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf49-202ENST00000547606 IGF1RP08069 1367 aa22.38■■□□□ 1.17
C12orf49-202ENST00000547606 RUSC2Q8N2Y8 1516 aa22.38■■□□□ 1.17
C12orf49-202ENST00000547606 CUL7Q14999 1698 aa22.32■■□□□ 1.16
C12orf49-202ENST00000547606 NUP160Q12769 1436 aa22.31■■□□□ 1.16
C12orf49-202ENST00000547606 KDM4FA0A1W2PPD8 638 aa22.28■■□□□ 1.16
C12orf49-202ENST00000547606 TSPOAP1O95153 1857 aa22.28■■□□□ 1.16
C12orf49-202ENST00000547606 KDM6BO15054 1643 aa22.28■■□□□ 1.16
C12orf49-202ENST00000547606 CARMIL1Q5VZK9 1371 aa22.26■■□□□ 1.15
C12orf49-202ENST00000547606 DIP2BQ9P265 1576 aa22.25■■□□□ 1.15
C12orf49-202ENST00000547606 ABCC10Q5T3U5 1492 aa22.23■■□□□ 1.15
C12orf49-202ENST00000547606 FAM69CQ0P6D2 419 aa22.21■■□□□ 1.15
C12orf49-202ENST00000547606 FAM9AQ8IZU1 332 aaPredicted RBP22.19■■□□□ 1.14
C12orf49-202ENST00000547606 MAPKBP1O60336 1514 aa22.17■■□□□ 1.14
C12orf49-202ENST00000547606 PRG4Q92954 1404 aaPredicted RBP22.17■■□□□ 1.14
C12orf49-202ENST00000547606 RAPGEF2Q9Y4G8 1499 aa22.15■■□□□ 1.14
C12orf49-202ENST00000547606 ADCY10Q96PN6 1610 aa22.14■■□□□ 1.14
C12orf49-202ENST00000547606 EEA1Q15075 1411 aa22.14■■□□□ 1.13
C12orf49-202ENST00000547606 CSRNP3Q8WYN3 585 aa22.12■■□□□ 1.13
C12orf49-202ENST00000547606 PRXQ9BXM0 1461 aa22.09■■□□□ 1.13
C12orf49-202ENST00000547606 NPM1P06748 294 aaKnown RBP eCLIP22.07■■□□□ 1.12
C12orf49-202ENST00000547606 KIAA0586Q9BVV6 1533 aa22.06■■□□□ 1.12
C12orf49-202ENST00000547606 JPH4Q96JJ6 628 aa22.04■■□□□ 1.12
C12orf49-202ENST00000547606 HECW2Q9P2P5 1572 aa21.99■■□□□ 1.11
C12orf49-202ENST00000547606 ADGRL1O94910 1474 aa21.98■■□□□ 1.11
C12orf49-202ENST00000547606 IQGAP2Q13576 1575 aa21.98■■□□□ 1.11
C12orf49-202ENST00000547606 PPRC1Q5VV67 1664 aaKnown RBP21.95■■□□□ 1.1
C12orf49-202ENST00000547606 EHMT2Q96KQ7 1210 aa21.95■■□□□ 1.1
C12orf49-202ENST00000547606 CTTNBP2Q8WZ74 1663 aa21.94■■□□□ 1.1
C12orf49-202ENST00000547606 KIF21BO75037 1637 aa21.92■■□□□ 1.1
C12orf49-202ENST00000547606 CARMIL2Q6F5E8 1435 aa21.84■■□□□ 1.09
C12orf49-202ENST00000547606 UGGT2Q9NYU1 1516 aa21.84■■□□□ 1.09
C12orf49-202ENST00000547606 TTBK1Q5TCY1 1321 aaPredicted RBP21.83■■□□□ 1.09
C12orf49-202ENST00000547606 GOLGA3Q08378 1498 aa21.83■■□□□ 1.08
C12orf49-202ENST00000547606 DISP1Q96F81 1524 aa21.8■■□□□ 1.08
C12orf49-202ENST00000547606 UBTFP17480 764 aaKnown RBP21.8■■□□□ 1.08
C12orf49-202ENST00000547606 RANGAP1P46060 587 aaPredicted RBP21.79■■□□□ 1.08
C12orf49-202ENST00000547606 GLI2P10070 1586 aa21.78■■□□□ 1.08
C12orf49-202ENST00000547606 KIAA0556O60303 1618 aa21.77■■□□□ 1.08
C12orf49-202ENST00000547606 TNIKQ9UKE5 1360 aa21.75■■□□□ 1.07
C12orf49-202ENST00000547606 PTPRGP23470 1445 aa21.74■■□□□ 1.07
C12orf49-202ENST00000547606 COL17A1Q9UMD9 1497 aaPredicted RBP21.73■■□□□ 1.07
C12orf49-202ENST00000547606 ASXL2Q76L83 1435 aa21.72■■□□□ 1.07
C12orf49-202ENST00000547606 ABCC2Q92887 1545 aa21.71■■□□□ 1.07
C12orf49-202ENST00000547606 MAP3K4Q9Y6R4 1608 aa21.71■■□□□ 1.07
C12orf49-202ENST00000547606 P3H3Q8IVL6 736 aa21.7■■□□□ 1.06
C12orf49-202ENST00000547606 PLB1Q6P1J6 1458 aa21.69■■□□□ 1.06
C12orf49-202ENST00000547606 SAMD9Q5K651 1589 aa21.65■■□□□ 1.06
C12orf49-202ENST00000547606 FBXO41Q8TF61 875 aa21.63■■□□□ 1.05
C12orf49-202ENST00000547606 TEX14Q8IWB6 1497 aa21.6■■□□□ 1.05
C12orf49-202ENST00000547606 EPRSP07814 1512 aaKnown RBP21.6■■□□□ 1.05
C12orf49-202ENST00000547606 FHOD3Q2V2M9 1422 aa21.59■■□□□ 1.05
C12orf49-202ENST00000547606 UACAQ9BZF9 1416 aa21.59■■□□□ 1.05
C12orf49-202ENST00000547606 EFCAB5A4FU69 1503 aa21.59■■□□□ 1.05
C12orf49-202ENST00000547606 ZCCHC11Q5TAX3 1644 aaKnown RBP21.58■■□□□ 1.04
C12orf49-202ENST00000547606 UHRF1BP1LA0JNW5 1464 aa21.56■■□□□ 1.04
C12orf49-202ENST00000547606 LOC105371045A0A1W2PR82 267 aa21.52■■□□□ 1.04
C12orf49-202ENST00000547606 ARHGAP35Q9NRY4 1499 aa21.52■■□□□ 1.03
C12orf49-202ENST00000547606 ABCA8O94911 1581 aa21.51■■□□□ 1.03
C12orf49-202ENST00000547606 KDM5BQ9UGL1 1544 aa21.5■■□□□ 1.03
C12orf49-202ENST00000547606 ARID3CA6NKF2 412 aa21.46■■□□□ 1.03
C12orf49-202ENST00000547606 CLIP1P30622 1438 aa21.45■■□□□ 1.02
C12orf49-202ENST00000547606 RAPGEF6Q8TEU7 1601 aa21.44■■□□□ 1.02
C12orf49-202ENST00000547606 CFAP43Q8NDM7 1665 aa21.44■■□□□ 1.02
C12orf49-202ENST00000547606 WDR7Q9Y4E6 1490 aa21.39■■□□□ 1.01
C12orf49-202ENST00000547606 CEP162Q5TB80 1403 aa21.38■■□□□ 1.01
C12orf49-202ENST00000547606 FMN1Q68DA7 1419 aa21.38■■□□□ 1.01
C12orf49-202ENST00000547606 ATP1B4Q9UN42 357 aaPredicted RBP21.36■■□□□ 1.01
C12orf49-202ENST00000547606 NUP153P49790 1475 aaKnown RBP21.36■■□□□ 1.01
C12orf49-202ENST00000547606 LMTK3Q96Q04 1460 aa21.36■■□□□ 1.01
C12orf49-202ENST00000547606 MAGI3Q5TCQ9 1506 aa21.34■■□□□ 1.01
C12orf49-202ENST00000547606 ADAMTSL3P82987 1691 aa21.34■■□□□ 1.01
C12orf49-202ENST00000547606 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.34■■□□□ 1.01
C12orf49-202ENST00000547606 HNRNPUL2Q1KMD3 747 aaKnown RBP21.34■■□□□ 1.01
C12orf49-202ENST00000547606 ATP10BO94823 1461 aa21.33■■□□□ 1.01
C12orf49-202ENST00000547606 CD109Q6YHK3 1445 aa21.32■■□□□ 1
C12orf49-202ENST00000547606 PTPRMP28827 1452 aa21.31■■□□□ 1
C12orf49-202ENST00000547606 HECW1Q76N89 1606 aa21.29■■□□□ 1
C12orf49-202ENST00000547606 PCF11O94913 1555 aaKnown RBP21.28■■□□□ 1
C12orf49-202ENST00000547606 CDK13Q14004 1512 aaKnown RBP21.26■□□□□ 0.99
C12orf49-202ENST00000547606 KCNH8Q96L42 1107 aa21.25■□□□□ 0.99
C12orf49-202ENST00000547606 BCORL1Q5H9F3 1711 aa21.24■□□□□ 0.99
C12orf49-202ENST00000547606 CASKIN1Q8WXD9 1431 aa21.24■□□□□ 0.99
C12orf49-202ENST00000547606 MADDQ8WXG6 1647 aa21.24■□□□□ 0.99
C12orf49-202ENST00000547606 FYCO1Q9BQS8 1478 aa21.2■□□□□ 0.98
C12orf49-202ENST00000547606 ARAP3Q8WWN8 1544 aa21.19■□□□□ 0.98
C12orf49-202ENST00000547606 RIMS1Q86UR5 1692 aaKnown RBP21.18■□□□□ 0.98
C12orf49-202ENST00000547606 PLEKHD1A6NEE1 506 aa21.18■□□□□ 0.98
C12orf49-202ENST00000547606 LRRIQ1Q96JM4 1722 aa21.18■□□□□ 0.98
C12orf49-202ENST00000547606 CCDC18Q5T9S5 1454 aa21.14■□□□□ 0.98
C12orf49-202ENST00000547606 ILDR2Q71H61 639 aa21.12■□□□□ 0.97
C12orf49-202ENST00000547606 CDK11AQ9UQ88 783 aaPredicted RBP21.11■□□□□ 0.97
C12orf49-202ENST00000547606 VPS8Q8N3P4 1428 aa21.1■□□□□ 0.97
C12orf49-202ENST00000547606 FRMPD1Q5SYB0 1578 aa21.1■□□□□ 0.97
C12orf49-202ENST00000547606 DISP3Q9P2K9 1392 aa21.09■□□□□ 0.97
C12orf49-202ENST00000547606 ABCA9Q8IUA7 1624 aa21.08■□□□□ 0.97
C12orf49-202ENST00000547606 SOCS7O14512 581 aa21.08■□□□□ 0.97
C12orf49-202ENST00000547606 HSPA2P54652 639 aa21.06■□□□□ 0.96
C12orf49-202ENST00000547606 TROQ12816 1431 aaPredicted RBP21.05■□□□□ 0.96
C12orf49-202ENST00000547606 ARID4BQ4LE39 1312 aaPredicted RBP21.04■□□□□ 0.96
C12orf49-202ENST00000547606 RAPGEF3O95398 923 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms